FFCP PHASE1:Hg19::chrX:152767880..152767932,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=633 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1044 | |||
|TSSclassifier=strong | |||
|UniProt=A6NLG9 | |||
|association_with_transcript=0bp_to_ENST00000370204,ENST00000430380_5end | |||
|description=CAGE_peak_18_at_BGN_5end | |||
|id=chrX:152767880..152767932,+ | |||
|ontology_enrichment_celltype=CL:0000327!1.93e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000138;8.03e-13;6!CL:0000669;8.41e-12;4!CL:0000153;1.22e-11;9!CL:0000447;1.22e-11;9!CL:0000327;2.59e-11;15!CL:0000499;3.47e-10;28!CL:0002564;1.99e-09;3!CL:0002602;4.91e-07;2!CL:0002575;5.84e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.68e-13,6;CL:0000138,7.68e-13,6;CL:0000669,9.16e-12,4;CL:0000153,1.16e-11,9;CL:0000447,1.16e-11,9;CL:0000327,2.22e-11,15;CL:0000499,3.20e-10,28;CL:0002564,2.27e-09,3;CL:0002602,5.14e-07,2;CL:0002575,5.60e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.94e-07;4!UBERON:0007284;5.94e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.47e-18!115;UBERON:0000477!1.39e-12!286;UBERON:0000955!6.01e-12!69;UBERON:0006238!6.01e-12!69;UBERON:0004111!1.95e-11!241;UBERON:0002616!2.59e-11!59;UBERON:0000025!2.95e-11!194;UBERON:0001049!2.95e-10!57;UBERON:0005068!2.95e-10!57;UBERON:0006241!2.95e-10!57;UBERON:0007135!2.95e-10!57;UBERON:0001017!8.95e-10!82;UBERON:0000153!1.24e-09!129;UBERON:0007811!1.24e-09!129;UBERON:0000033!4.28e-09!123;UBERON:0005743!8.10e-09!86;UBERON:0004121!2.77e-08!169;UBERON:0003080!2.89e-08!42;UBERON:0000073!3.74e-08!94;UBERON:0001016!3.74e-08!94;UBERON:0003075!8.20e-08!86;UBERON:0007284!8.20e-08!86;UBERON:0000924!9.80e-08!173;UBERON:0006601!9.80e-08!173;UBERON:0002780!9.95e-08!41;UBERON:0001890!9.95e-08!41;UBERON:0006240!9.95e-08!41;UBERON:0000119!3.61e-07!312;UBERON:0002346!4.98e-07!90;UBERON:0000481!5.08e-07!347;UBERON:0000483!8.24e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;8.84e-15;5!UBERON:0002216;8.84e-15;5!UBERON:0011134;8.84e-15;5!UBERON:0002209;8.84e-15;5!UBERON:0002213;8.84e-15;5!UBERON:0007844;8.84e-15;5!UBERON:0011138;8.84e-15;5!UBERON:0001130;8.84e-15;5!UBERON:0001066;8.84e-15;5!UBERON:0001468;8.84e-15;5!UBERON:0004905;1.08e-12;8!UBERON:0000982;1.08e-12;8!UBERON:0004770;1.08e-12;8!UBERON:0002242;1.99e-09;3!UBERON:0003978;3.68e-09;3!UBERON:0000946;3.68e-09;3!UBERON:0006444;4.91e-07;2!UBERON:0001995;4.91e-07;2!UBERON:0004715;4.91e-07;2!UBERON:0003127;7.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.05e-14,5;UBERON:0002216,1.05e-14,5;UBERON:0011134,1.05e-14,5;UBERON:0002209,1.05e-14,5;UBERON:0002213,1.05e-14,5;UBERON:0005856,1.05e-14,5;UBERON:0005866,1.05e-14,5;UBERON:0005863,1.05e-14,5;UBERON:0007844,1.05e-14,5;UBERON:0011138,1.05e-14,5;UBERON:0001130,1.05e-14,5;UBERON:0001066,1.05e-14,5;UBERON:0001468,1.05e-14,5;UBERON:0004905,1.20e-12,8;UBERON:0000982,1.20e-12,8;UBERON:0004770,1.20e-12,8;UBERON:0002242,2.27e-09,3;UBERON:0003068,2.27e-09,3;UBERON:0002328,2.27e-09,3;UBERON:0004880,2.27e-09,3;UBERON:0003978,3.25e-09,3;UBERON:0009751,3.25e-09,3;UBERON:0000946,3.25e-09,3;UBERON:0002523,3.25e-09,3;UBERON:0005983,3.25e-09,3;UBERON:0002165,3.25e-09,3;UBERON:0002062,3.25e-09,3;UBERON:0007280,3.25e-09,3;UBERON:0006444,5.14e-07,2;UBERON:0001995,5.14e-07,2;UBERON:0004715,5.14e-07,2;UBERON:0003127,6.85e-07,2;UBERON:0002133,9.10e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,6.06455129504228,8.28493439319789,0,0,0,0,0.123121058076788,1.83600622119828,1.56727360739044,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.511450247374121,5.78302643815306,11.5307719446255,19.9888196165937,21.4727205703797,47.6902172896583,0,0,0.087834785693126,1.83370705696798,0,0,0,0,0,0,0,0,0.198762407366705,0,4.16568601929113,0,0,0.825354125820202,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0.560677600142307,1.06748995729705,0.24666754841716,0.933633106199299,0,0.163461903113459,0.908144565869588,0,0,0,0,0,0,0,0,0,0.122834317311768,0.516628905878827,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0.184099797284599,0,1.06502877754984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,3.7041661019826,2.94017422771084,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0.448524337381443,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0.871533458600294,1.09970290300263,0,0,0,0.718874566474748,4.59447743336456,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,24.9063728189854,5.50187573165645,2.17012018959788,0,0,0,0,0.902838299183157,0,0,0,0,0,15.6640925970192,4.80400793335198,0,0,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0.431831832204279,0,2.16757150035082,4.51520796469368,0,0.831076008928724,0,0,0,0,0,0,0.515205058238611,0,0,1.14853107599234,0,0,0,0.154048617114644,0,0,0.214840489736547,0.290033387828457,0,0,0,0,0,0,0,1.5740617341532,0.6970372701606,0,1.06461206063404,0,0.74129687641568,0.143124886741991,0.372158369359667,0.316379424718726,0,0.767693373934002,0.855877976067841,0,0.78494864019923,0,0,0,0.404364963146632,0,0,0,0.974853958525138,0,0,0,0,0,0.66343897524122,1.75380354101505,0,0,0,0,0,0,0,0,0,3.58882980006029,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,1.33228787199128,0,0,0,0,0.111443384277478,0,0.71623345421307,0,0,0,0.422008249231538,0.111308705022906,0,0,6.77443160053637,0,0,0.511343412510774,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0,0,0,0,0,4.84786628573922,0.113942055847001,0,0.179515288819544,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876214728748802,0,0.468528891450678,0,0,0,1.57833761139756,0,0,2.0851571277401,0,0,0,0,0,0,1.42304773014896,0,0,0,0,3.14508002835654,0,0,0,0,2.13375836274523,0,0.451961481561065,0.137041924646751,0,0.189932387867636,0,0.160317640503067,0,0,0,0,0,0,0,0,0.271808412147228,0.732219924186332,0,0,0,0.410716136675979,0,0,0,11.1712960508902,3.43740636017525,2.87149209830726,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,5.83162234014067,3.09482069996489,0,0,0,0,0,0,0,0,5.22539776175055,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0.628817220398664,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,9.17454713104114,2.5513681853476,0.993542447062135,0,17.9971787465434,0,0,0,0,0,0,0,0,0.568209015825267,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0.776314784381297,0,0.265841714557995,0,2.40412174395549,3.80805212168795,0.813741466409323,0,0.751873899297419,0,0,0,0,0,2.52369796457302,0,0,0.521988583930423,2.493765180635,0,0,0,13.2784622279218,4.38568099157414,0,0.192914038270915,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0.636008701306837,0,0,0.352675943690684,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0,0.414943514785307,0.484426936895553,0,0,0,3.30171477339022,0,0,0,0,1.5794168953344,0,0,0,1.31017534008077,0,0,0,0.413373593002368,0,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0,0,0.455324382702595,0.532214220975833,0,0,0.135939465953663,0.394636641377094,0,0,0.156986185701028,0.157115589916002,0,0,1.72742072974897,0,0,0,0,0,0,0.414432328326074,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,7.28566489588709,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,2.44358186747619,1.48253142339228,0,0,0,0,0,0.917458566809082,0,0,0.203974470572744,0,0,4.09194519983426,20.7979032884138,0,0,0,0,0.101988829741982,0,0,0,1.36401656792831,0,1.65833887891756,0.620597975171371,5.5440835294255,0.23806443146374,0,0.0620747142958579,0.112131862580613,0.12729431655633,0,5.660635445321,1.36893320434112,1.48174516632093,6.74188730691158,4.9899053481902,0,0,0,0,0,8.43465964861779,1.22068853494722,0,0.603821380773079,0 | |||
|short_description=p18@BGN | |||
}} |
Revision as of 07:23, 23 January 2014
Short description: | p18@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_BGN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000370204, ENST00000430380_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | A6NLG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.68e-13 | 6 |
chondrocyte | 7.68e-13 | 6 |
pericyte cell | 9.16e-12 | 4 |
GAG secreting cell | 1.16e-11 | 9 |
carbohydrate secreting cell | 1.16e-11 | 9 |
extracellular matrix secreting cell | 2.22e-11 | 15 |
stromal cell | 3.20e-10 | 28 |
nucleus pulposus cell of intervertebral disc | 2.27e-09 | 3 |
annulus pulposus cell | 5.14e-07 | 2 |
central nervous system pericyte | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 1.05e-14 | 5 |
symphysis | 1.05e-14 | 5 |
nonsynovial joint | 1.05e-14 | 5 |
fibrous joint | 1.05e-14 | 5 |
cartilaginous joint | 1.05e-14 | 5 |
developing mesenchymal condensation | 1.05e-14 | 5 |
pre-cartilage condensation | 1.05e-14 | 5 |
cartilaginous condensation | 1.05e-14 | 5 |
cartilage element | 1.05e-14 | 5 |
post-cranial axial skeletal system | 1.05e-14 | 5 |
vertebral column | 1.05e-14 | 5 |
intervertebral disk | 1.05e-14 | 5 |
intervertebral joint | 1.05e-14 | 5 |
articulation | 1.20e-12 | 8 |
skeletal joint | 1.20e-12 | 8 |
articular system | 1.20e-12 | 8 |
nucleus pulposus | 2.27e-09 | 3 |
axial mesoderm | 2.27e-09 | 3 |
notochord | 2.27e-09 | 3 |
chordamesoderm | 2.27e-09 | 3 |
valve | 3.25e-09 | 3 |
cardiac mesenchyme | 3.25e-09 | 3 |
cardial valve | 3.25e-09 | 3 |
tunica intima | 3.25e-09 | 3 |
heart layer | 3.25e-09 | 3 |
endocardium | 3.25e-09 | 3 |
endocardial cushion | 3.25e-09 | 3 |
presumptive endocardium | 3.25e-09 | 3 |
annulus fibrosus | 5.14e-07 | 2 |
fibrocartilage | 5.14e-07 | 2 |
annulus fibrosus disci intervertebralis | 5.14e-07 | 2 |
open tracheal system trachea | 6.85e-07 | 2 |
atrioventricular valve | 9.10e-07 | 2 |