FFCP PHASE1:Hg19::chrX:131157609..131157642,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51765 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=Q9P289 | |||
|association_with_transcript=0bp_to_ENST00000496850,NM_001042452_5end | |||
|description=CAGE_peak_4_at_MST4_5end | |||
|id=chrX:131157609..131157642,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.54e-35!172;CL:0000566!4.54e-35!172;CL:0002032!1.42e-33!165;CL:0000837!1.42e-33!165;CL:0000988!6.03e-33!182;CL:0000738!4.32e-27!140;CL:0002031!8.51e-24!124;CL:0002087!1.14e-23!119;CL:0000763!2.20e-21!112;CL:0000049!2.20e-21!112;CL:0000766!3.70e-15!76;CL:0000860!2.38e-14!45;CL:0002057!1.32e-13!42;CL:0000839!1.66e-13!70;CL:0000557!1.57e-12!71;CL:0002194!9.45e-12!63;CL:0000576!9.45e-12!63;CL:0000040!9.45e-12!63;CL:0000559!9.45e-12!63;CL:0002009!2.80e-11!65;CL:0000542!3.40e-11!53;CL:0000051!3.40e-11!53;CL:0000838!5.25e-11!52;CL:0000063!3.73e-09!578;CL:0000003!3.63e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.63e-09;33!CL:0002057;8.63e-09;33!CL:0000576;7.28e-08;48!CL:0000763;3.44e-07;100!CL:0002322;4.40e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.27e-24,177;CL:0000037,7.35e-24,168;CL:0002032,1.29e-23,161;CL:0000837,1.29e-23,161;CL:0000738,2.79e-16,136;CL:0002087,1.52e-15,115;CL:0000763,1.71e-15,108;CL:0000049,1.71e-15,108;CL:0002031,2.97e-15,120;CL:0000860,4.19e-10,42;CL:0002057,4.19e-10,42;CL:0000766,8.18e-10,72;CL:0000473,1.38e-08,48;CL:0000234,1.38e-08,48;CL:0000839,2.58e-08,66;CL:0000838,2.71e-08,52;CL:0000557,4.67e-08,67;CL:0000542,5.48e-08,53;CL:0000051,5.48e-08,53;CL:0002194,3.81e-07,59;CL:0000576,3.81e-07,59;CL:0000040,3.81e-07,59;CL:0000559,3.81e-07,59;CL:0002322,4.65e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.41e-07;42 | |||
|ontology_enrichment_disease=DOID:162!3.00e-15!235;DOID:14566!2.56e-14!239;DOID:2531!3.62e-13!51;DOID:0060083!3.62e-13!51;DOID:305!5.72e-11!106;DOID:1240!1.57e-10!39;DOID:0050686!1.74e-10!137;DOID:8692!4.47e-09!31;DOID:0050687!1.68e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.35e-10;31!DOID:1240;6.13e-09;39!DOID:2531;2.73e-08;51!DOID:0060083;2.73e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.72e-12,51;DOID:0060083,5.72e-12,51;DOID:1240,5.42e-11,39;DOID:162,1.09e-10,235;DOID:8692,1.29e-10,31;DOID:14566,5.41e-10,239;DOID:0050686,1.21e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.02e-16!102;UBERON:0003061!3.02e-16!102;UBERON:0002193!2.65e-12!112;UBERON:0001474!4.59e-11!86;UBERON:0004765!1.15e-10!101;UBERON:0001434!1.15e-10!101;UBERON:0002371!1.23e-10!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.86e-08;15!UBERON:0000179;1.86e-08;15!UBERON:0000463;1.86e-08;15!UBERON:0001737;2.20e-08;9!UBERON:0001557;2.20e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.45e-11,98;UBERON:0003061,3.45e-11,98;UBERON:0002193,6.37e-09,108;UBERON:0001737,2.13e-08,9;UBERON:0000178,3.53e-08,15;UBERON:0000179,3.53e-08,15;UBERON:0000463,3.53e-08,15 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0.684372125364421,0.251085279189606,1.52826811495903,2.46301768349837,1.57421562627358,0.786728553697808,2.30297638858328,1.08371286321253,0.919421224478927,0.30120591877825,0.739508020333575,0.542270404062111,0.995184627411951,0.587200878669695,1.66198622559563,0.802177789880567,0.868043482863407,1.34349284543955,0,0.515151135268373,0.726991193897824,0.755751887377619,1.69808842831471,1.39457422143411,0.411167888021826,2.78735733805593,1.7261543539329,0.768482119587302,4.25668013799453,0.689491361473237,0.645484683583826,5.41705946377367,0.752969358170419,2.18324920046277,2.47195832889593,2.75475503133812,1.60464513538047,3.83602275479425,0.659702600373432,1.39624560335142,2.13112375266347,3.48251086354301,1.70215567407342,2.4912889959823,0.75374599577023,1.0429658368404,2.38907729175628,0.605399502633369,1.47311054395026,8.54448446090388,1.26753171787165,0.637812899895131,1.04829322754188,1.12328631146495,0.901061357049038,0.32145117339416,0.855038231223746,2.58591680358817,1.82664153764634,1.75996244461323,0,0.889509253863555,0.426730222566507,1.60158394814405,1.14950487990897,0.661044872784862,0.954053754535364,1.1384259382189,0,0,0,1.68152568894461,2.63384084775077,0.590129310341499,0.786021525498329,0.616804496998528,0.501559486172034,0.651844533267181,0.473447805734733,1.94826728407911,1.11410456885174,2.3568472597987,0.443067789167242,0,0.512365278902701,0.520237390239513,0.822189523018381,2.21080014228679,2.89803085735052,1.4828656316206,1.07016331235885,2.09071047609954,0.793165398882963,1.53288197440768,0.34362744548263,1.51811815211702,0.95569624297229,1.95325036156926,0,1.6563263098555,1.79181255616186,1.24930726552346,0.710331756132051,1.64225599384209,0.604820229674197,2.94184215361858,0.289648807765598,0,0,0,1.0843174571537,0,0.144846518960824,1.5905718941022,0,0.567208902984407,0.665188192387692,0.351339142772504,0.0654895377488563,0.364295288292542,0.370784442784429,0.324547393654683,0.348259474598534,0.531831842075461,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0.44905874525234,0,0,0,0,2.63560834872127,0,0,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.939475989150119,0.161872944368132,0.561803226808994,0.204154171254893,0.737005903870608,0,0,0,0,0,1.0100166837244,0.375355559615893,0,0.438977620880838,0.612975591598039,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0.57978255948989,0,0.286804595389004,3.17131635936948,3.31324420803713,4.06678800043314,2.69518743039963,3.28017106138317,2.91981887260664,0,0,0,0.464367928031979,0,1.41968160047813,1.34867752062481,2.16909926895134,2.20587945464788,2.61455332910887,1.42362371466658,2.29213223872279,1.76599318612811,2.69323009862473,0,0,0,0,0,0.982827216677626,0,0.882926198829301,1.10689594688802,0.514703430895577,1.09750285408626,0,1.10581869652794,2.31471112896324,0.651616610620649,0,1.44331342025273,0.695582429850461,0,0,0,0,1.58040879591855,0,0,0.468008530278475,0.297262324577456,0.93733833986777,2.85569617938061,3.82792762554443,1.88072897675981,1.74380363108377,0.383382679165211,10.8385912337108,1.58487181223807,0.829312462163088,2.59415916150531,1.38866676769018,0.253991577168676,0,0,0,1.33675740514321,0,0.285826432630578,0,0,0.1466765716419,0.387815147273333,0,0,0,0,0.257207374262142,0,0.532844358032199,0,0,0.823240336780769,0,0.355391948742546,1.58390374586686,1.80863626235752,1.74306691720059,2.59929777073348,1.2162378064119,0.502257091432126,0,0,0,0,0.434343920002738,0,0.358121926479791,1.56919201590938,2.1673383622212,1.72502059887614,2.18183161675572,0.508189248444927,0,0,0.502548796003046,0,0.749007023947182,8.97484377612075,0.828831026872071,0.24538298343828,0,0,0,0,0,0,0,0,0,1.99267679560631,0.184369168541703,0,0.195801157462741,0,2.27444828735176,1.2942852049117,1.17400313583789,0,0,0.604780586659361,0,0,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0.232420756919918,0.846016147141356,1.40354529212299,0.460404944679482,0.459257792658427,0.364182336013434,0.131124414959424,0,0.693138033939733,0,0,0.844413031143006,0,0,0,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0.769350375349168,0.328014645699706,1.30151357865721,0.309123034943167,0.457847324091717,0.660075999364704,0,0.650060246036521,0,0.193341436584244,0.462145851343933,0.307007349452259,0.275673144969061,0.214840489736547,0.145016693914229,0.255679882248303,0.623224249527161,1.65284915360978,1.15314040419064,0.893288987462089,0.10115778085555,0,0.31481234683064,0,0,0,0,0.37064843820784,0.286249773483982,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.409499734223957,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0.281695602532241,1.57752487424457,0.294747123039363,0,0,0.2111076352976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| |||
|short_description=p4@MST4 | |||
}} |
Revision as of 06:56, 23 January 2014
Short description: | p4@MST4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MST4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000496850, NM_001042452_5end |
EntrezGene: | MST4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.27e-24 | 177 |
hematopoietic stem cell | 7.35e-24 | 168 |
hematopoietic oligopotent progenitor cell | 1.29e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.29e-23 | 161 |
leukocyte | 2.79e-16 | 136 |
nongranular leukocyte | 1.52e-15 | 115 |
myeloid cell | 1.71e-15 | 108 |
common myeloid progenitor | 1.71e-15 | 108 |
hematopoietic lineage restricted progenitor cell | 2.97e-15 | 120 |
classical monocyte | 4.19e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.19e-10 | 42 |
myeloid leukocyte | 8.18e-10 | 72 |
defensive cell | 1.38e-08 | 48 |
phagocyte | 1.38e-08 | 48 |
myeloid lineage restricted progenitor cell | 2.58e-08 | 66 |
lymphoid lineage restricted progenitor cell | 2.71e-08 | 52 |
granulocyte monocyte progenitor cell | 4.67e-08 | 67 |
lymphocyte | 5.48e-08 | 53 |
common lymphoid progenitor | 5.48e-08 | 53 |
monopoietic cell | 3.81e-07 | 59 |
monocyte | 3.81e-07 | 59 |
monoblast | 3.81e-07 | 59 |
promonocyte | 3.81e-07 | 59 |
embryonic stem cell | 4.65e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.45e-11 | 98 |
blood island | 3.45e-11 | 98 |
hemolymphoid system | 6.37e-09 | 108 |
larynx | 2.13e-08 | 9 |
blood | 3.53e-08 | 15 |
haemolymphatic fluid | 3.53e-08 | 15 |
organism substance | 3.53e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.72e-12 | 51 |
immune system cancer | 5.72e-12 | 51 |
leukemia | 5.42e-11 | 39 |
cancer | 1.09e-10 | 235 |
myeloid leukemia | 1.29e-10 | 31 |
disease of cellular proliferation | 5.41e-10 | 239 |
organ system cancer | 1.21e-07 | 137 |