FFCP PHASE1:Hg19::chrX:57619083..57619113,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13199 | |||
|TSSclassifier=weak | |||
|UniProt=P98169 | |||
|association_with_transcript=-286bp_to_L14788_5end | |||
|coexpression_cluster_id=C77 | |||
|description=CAGE_peak_1_at_ZXDB_5end | |||
|id=chrX:57619083..57619113,+ | |||
|ontology_enrichment_celltype=CL:1000413!2.25e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.19e-18;5!CL:1000413;3.90e-12;9!CL:0000244;5.60e-08;4!CL:0000731;5.60e-08;4!CL:0002321;8.88e-08;15!CL:0000071;1.10e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.85e-18,5;CL:1000413,1.10e-12,9;CL:0000066,1.48e-08,253;CL:0000244,3.84e-08,4;CL:0000731,3.84e-08,4;CL:0000071,4.36e-08,18;CL:0002546,4.36e-08,18;CL:0000115,3.20e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;1.10e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!1.44e-10!286;UBERON:0004119!2.44e-09!169;UBERON:0000925!2.44e-09!169;UBERON:0006595!2.44e-09!169;UBERON:0004111!9.19e-09!241;UBERON:0000025!1.07e-08!194;UBERON:0004921!4.55e-08!129;UBERON:0004185!4.55e-08!129;UBERON:0000077!1.41e-07!130;UBERON:0001007!2.19e-07!155;UBERON:0001555!2.19e-07!155;UBERON:0007026!2.19e-07!155;UBERON:0003915!2.25e-07!9;UBERON:0004700!2.25e-07!9;UBERON:0001917!2.25e-07!9;UBERON:0005911!2.59e-07!82;UBERON:0000922!6.99e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;3.90e-12;9!UBERON:0004700;3.90e-12;9!UBERON:0001917;3.90e-12;9!UBERON:0000487;4.76e-08;22!UBERON:0002107;5.54e-08;19!UBERON:0006925;5.54e-08;19!UBERON:0000490;7.55e-08;33!UBERON:0004638;1.10e-07;18!UBERON:0001986;1.10e-07;18!UBERON:0004852;1.10e-07;18!UBERON:0002423;1.87e-07;25!UBERON:0006914;6.30e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,1.10e-12,9;UBERON:0004700,1.10e-12,9;UBERON:0001917,1.10e-12,9;UBERON:0007499,1.29e-09,25;UBERON:0009856,3.54e-09,26;UBERON:0008835,8.37e-09,22;UBERON:0003894,8.37e-09,22;UBERON:0000487,2.04e-08,22;UBERON:0009854,2.33e-08,23;UBERON:0002107,3.96e-08,19;UBERON:0006925,3.96e-08,19;UBERON:0008836,3.96e-08,19;UBERON:0004638,4.36e-08,18;UBERON:0001986,4.36e-08,18;UBERON:0004852,4.36e-08,18;UBERON:0009497,1.41e-07,25;UBERON:0000015,1.41e-07,25;UBERON:0002423,1.41e-07,25;UBERON:0006235,1.41e-07,25;UBERON:0004161,1.41e-07,25;UBERON:0006914,3.04e-07,25 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,2.45733936501509,3.48900583986214,0,0,0,0.331397375727916,0,0,0,0,0,0.612002073732759,0,0,0.136874425072884,0.251085279189606,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0,0.309632246632152,0,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0.989553900560148,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0.651844533267181,0,0,0,1.17842362989935,0,0.541607727530031,0.128091319725675,0,0,0.276350017785848,0,0.296573126324121,0.535081656179426,0,0,0,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.383587685530591,0,0.50133791063589,0,0,0,0.189069634328136,0,0.175669571386252,0,0.364295288292542,0.370784442784429,0,0.174129737299267,0,0,0.571994910780128,0.371457501329565,1.98762407366705,0.860234595106124,1.38856200643038,1.13061588384802,1.67799774483962,1.6507082516404,1.67195973229448,0.516833518338658,0.35576626268671,0,0,0.760272105718513,0.488124115096339,0.735326160691737,0.81014194788176,0.892997282840798,0,0.337834441449967,0,1.89853131913626,0.183201743930407,0,0,0,0,0.759783069987479,0,0.286836620748814,1.06400514659507,0,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0.302714855289863,0.576175924479999,0.70296429550139,0.624320153660641,0,0,0,0.161872944368132,0,0.204154171254893,0.368502951935304,0,0,0,0,0.718618141816238,0,0.250237039743928,0.554128230968366,0,0,0.45071417671979,0.567160915800105,0,0.213557388818567,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0.201504196455281,0,0,0,0,2.92736894711029,4.24095258628753,2.20768491452085,2.90250954043037,2.52320850875628,0.72995471815166,0,0,0,0,0,0.709840800239063,1.01150814046861,0.964044119533928,0.772057809126758,1.08939722046203,0.237270619111097,0.674156540800822,0.392442930250692,0.38474715694639,0,0,0.4115740113314,1.47008711385542,3.80265104465493,8.84544495009863,2.95394953340702,0,0.614942192715568,0,0.109750285408626,0,0.100528972411631,0,0.325808305310325,0,1.44331342025273,0.231860809950154,0.234817388471643,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0.264145302039678,0.414656231081544,0.720599767084807,0.50496973370552,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0,1.30139853857622,0,0.670065061337395,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.320182673410333,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0,0,0.321707842287215,0,0,0,0.246381468041427,0.519254429183621,0.232420756919918,0.241718899183244,0.601519410909855,0.644566922551274,0,0.546273504020151,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0.215915916102139,1.54227252690289,0,0.501689773854853,0.509752546090077,0.831076008928724,0,0,0,0,0,0,1.23649213977267,14.7426838357533,16.2543714843558,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,1.15699440752685,1.34533047155574,0.893288987462089,1.0115778085555,0.464845549297286,0,0,0.308033580176089,0,0.869932992075073,0,0.286249773483982,0,0,0.190630193923825,0.255897791311334,0,0.636406495851874,0,0,0,0.353437207037059,0,0,0,0,0.243713489631284,0,0.272999822815972,0.565621727814851,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0.709522128141196,0,0,0,0.349934720244983,0.192444225451024,0,0,0.847294206991012,1.29151611801369,0,1.7737206141467,2.06751060186264,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0.640276590135727,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0,0,0,0.614481528616916,0.223676107892416,0,0,0.278406173895242,1.23087398947712,0,0.33307196799782,0,0.18714054040822,0.439524537815682,0,0.111443384277478,0,0,0,0.307160702099232,0,0.140669416410513,0.556543525114529,0,0,0,0.276283915531148,0.251932747854276,0.409074730008619,0,0,0.449341755736634,1.25314822272926,0,0.394573622547734,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0,0,0,0.344743373241465,0.583209226766509,0.347249989866585,0,0.361789315876224,1.52581736317083,0.663475559587348,0,0.219385397153973,1.85195387982283,0,0.230850775511391,0,0.23056390438806,0.359030577639089,0,0,0.274792780205587,0,0,0.31396051279005,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0.432777279484182,0.995261931078505,0.442287822516696,1.22206028986725,0.889563386041866,0.247127877893006,0.939797545549098,0.471807930864739,0,0,0,0,0.242780379534093,1.18375320854817,0,0,0.063186579628488,0.300646838828985,0,0.66465387270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| |||
|short_description=p1@ZXDB | |||
}} |
Revision as of 05:52, 23 January 2014
Short description: | p1@ZXDB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZXDB_5end |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | -286bp_to_L14788_5end |
EntrezGene: | ZXDB |
HGNC: | 13199 |
UniProt: | P98169 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.85e-18 | 5 |
endothelial cell of artery | 1.10e-12 | 9 |
epithelial cell | 1.48e-08 | 253 |
transitional epithelial cell | 3.84e-08 | 4 |
urothelial cell | 3.84e-08 | 4 |
blood vessel endothelial cell | 4.36e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.36e-08 | 18 |
endothelial cell | 3.20e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 1.10e-12 | 9 |
arterial system endothelium | 1.10e-12 | 9 |
endothelium of artery | 1.10e-12 | 9 |
epithelial sac | 1.29e-09 | 25 |
sac | 3.54e-09 | 26 |
hepatic diverticulum | 8.37e-09 | 22 |
liver primordium | 8.37e-09 | 22 |
simple squamous epithelium | 2.04e-08 | 22 |
digestive tract diverticulum | 2.33e-08 | 23 |
liver | 3.96e-08 | 19 |
digestive gland | 3.96e-08 | 19 |
liver bud | 3.96e-08 | 19 |
blood vessel endothelium | 4.36e-08 | 18 |
endothelium | 4.36e-08 | 18 |
cardiovascular system endothelium | 4.36e-08 | 18 |
epithelium of foregut-midgut junction | 1.41e-07 | 25 |
anatomical boundary | 1.41e-07 | 25 |
hepatobiliary system | 1.41e-07 | 25 |
foregut-midgut junction | 1.41e-07 | 25 |
septum transversum | 1.41e-07 | 25 |
squamous epithelium | 3.04e-07 | 25 |