FFCP PHASE1:Hg19::chrX:47479246..47479272,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6853 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11494 | |||
|TSSclassifier=strong | |||
|UniProt=P17600 | |||
|association_with_transcript=0bp_to_ENST00000295987,ENST00000340666,NM_006950,NM_133499,uc004did.2,uc004die.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SYN1_5end | |||
|id=chrX:47479246..47479272,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.71e-07;6!CL:0000404;1.71e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.35e-09,8;CL:0000540,1.49e-07,6;CL:0000031,1.49e-07,6;CL:0000404,1.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.89e-15;82!CL:0000031;1.71e-07;6 | |||
|ontology_enrichment_disease=DOID:171!9.68e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.21e-11;10!DOID:169;1.38e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.13e-11,10;DOID:169,1.31e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.30e-42!94;UBERON:0001016!1.30e-42!94;UBERON:0001017!3.02e-42!82;UBERON:0005743!1.15e-40!86;UBERON:0000955!1.67e-34!69;UBERON:0006238!1.67e-34!69;UBERON:0001049!3.05e-32!57;UBERON:0005068!3.05e-32!57;UBERON:0006241!3.05e-32!57;UBERON:0007135!3.05e-32!57;UBERON:0002616!1.28e-31!59;UBERON:0002346!2.71e-31!90;UBERON:0003075!3.81e-29!86;UBERON:0007284!3.81e-29!86;UBERON:0002780!5.28e-26!41;UBERON:0001890!5.28e-26!41;UBERON:0006240!5.28e-26!41;UBERON:0003080!8.78e-25!42;UBERON:0003056!2.08e-22!61;UBERON:0001893!1.77e-21!34;UBERON:0002020!1.95e-21!34;UBERON:0003528!1.95e-21!34;UBERON:0002791!1.00e-20!33;UBERON:0000924!1.08e-20!173;UBERON:0006601!1.08e-20!173;UBERON:0001869!2.02e-20!32;UBERON:0004121!5.03e-19!169;UBERON:0000033!8.03e-19!123;UBERON:0007023!1.58e-18!115;UBERON:0000153!3.47e-18!129;UBERON:0007811!3.47e-18!129;UBERON:0002619!1.60e-17!22;UBERON:0001950!3.84e-16!20;UBERON:0000956!8.99e-16!25;UBERON:0000203!8.99e-16!25;UBERON:0000922!1.40e-10!612;UBERON:0000025!1.20e-09!194;UBERON:0000923!5.14e-09!604;UBERON:0005291!5.14e-09!604;UBERON:0006598!5.14e-09!604;UBERON:0002532!5.14e-09!604;UBERON:0002050!7.53e-09!605;UBERON:0005423!7.53e-09!605;UBERON:0003076!1.50e-08!15;UBERON:0003057!1.50e-08!15;UBERON:0000468!1.35e-07!659;UBERON:0002420!2.90e-07!9;UBERON:0007245!2.90e-07!9;UBERON:0010009!2.90e-07!9;UBERON:0010011!2.90e-07!9;UBERON:0000454!2.90e-07!9;UBERON:0004732!2.99e-07!13;UBERON:0000481!3.08e-07!347;UBERON:0002308!3.90e-07!9;UBERON:0000125!3.90e-07!9;UBERON:0000475!5.10e-07!365;UBERON:0001871!6.58e-07!7;UBERON:0004733!6.79e-07!12;UBERON:0002028!6.79e-07!12;UBERON:0007277!6.79e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.01e-33;41!UBERON:0001890;2.01e-33;41!UBERON:0000073;1.20e-32;53!UBERON:0002616;1.20e-32;53!UBERON:0001869;2.92e-32;32!UBERON:0001893;3.19e-32;34!UBERON:0003528;3.95e-32;34!UBERON:0002020;3.95e-32;34!UBERON:0002619;7.20e-32;22!UBERON:0002791;8.74e-32;32!UBERON:0001950;3.10e-29;20!UBERON:0000956;3.82e-27;25!UBERON:0000203;3.82e-27;25!UBERON:0001017;6.03e-27;75!UBERON:0001016;6.93e-26;83!UBERON:0000955;3.44e-25;68!UBERON:0004732;4.50e-13;13!UBERON:0004733;1.96e-12;12!UBERON:0002028;1.96e-12;12!UBERON:0002420;2.32e-12;9!UBERON:0007245;2.32e-12;9!UBERON:0010009;2.32e-12;9!UBERON:0010011;2.32e-12;9!UBERON:0000454;2.32e-12;9!UBERON:0000125;4.07e-12;9!UBERON:0002308;4.07e-12;9!UBERON:0001871;2.27e-10;6!UBERON:0011216;3.46e-10;132!UBERON:0001894;6.64e-10;7!UBERON:0000200;7.30e-10;6!UBERON:0009663;1.07e-09;7!UBERON:0002680;5.21e-09;9!UBERON:0001895;5.21e-09;9!UBERON:0002298;7.00e-09;6!UBERON:0007023;1.08e-08;114!UBERON:0001872;2.69e-08;5!UBERON:0000349;2.73e-08;5!UBERON:0002021;3.19e-08;5!UBERON:0000922;6.23e-08;49!UBERON:0000369;9.16e-07;4!UBERON:0002435;9.16e-07;4!UBERON:0000204;9.16e-07;4 | |||
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|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,1.80808358407193,0,0.975865597581014,1.60057375499824,0,1.25381888591235,0,0.410623275218653,0.251085279189606,0.382067028739756,0,0.157421562627358,0,0,0.309632246632152,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0.257575567634187,0.726991193897824,0.377875943688809,0,0.232429036905685,0.411167888021826,0.619412741790207,0.863077176966451,0.512321413058201,0.47296445977717,0.344745680736619,0,0,1.12945403725563,0.545812300115692,0.224723484445085,0,0.641858054152187,0.639337125799041,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,0,1.26584954976354,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822405995998037,0.167186495390678,0.32592226663359,0,0,0.334231370655521,0,0.443067789167242,0,0,0.130059347559878,0.493313713811028,0.276350017785848,0,0,0,0,0.793165398882963,0,0.34362744548263,0,0,0.651083453856419,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0.144824403882799,4.87613732627923,8.04841031644363,1.79007586580942,0,0,0,0,0,0.283604451492204,0.665188192387692,1.14185221401064,35.1678817711358,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.17859945656816,0,0,0,0.949265659568129,0,0,0,0,0,0,0.529636723252875,0,0,0.560677600142307,0,0.74000264525148,2.17847724779836,1.34710672069688,1.9615428373615,1.05950199351452,2.88087962239999,0.234321431833797,0.312160076830321,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0,0,0.516628905878827,0,0,0,0.718618141816238,0.168336113954066,0,0,0.877955241761676,0.30648779579902,0,0.567160915800105,0.358779271377724,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0.710019185033229,0.10075209822764,0,0,0,0,2.19552671033272,2.25300606146525,1.85910308591229,0.932949495138334,2.27088765788066,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0,0,0,0,0,0,3.2925920906512,4.41026134156626,1.26755034821831,0,1.18157981336281,0.882926198829301,0,0.686271241194102,0,0,0,0,0.325808305310325,1.03993478527958,0,0.231860809950154,1.87853910777315,0,0.462985512576611,0,0,0.858486162094873,0,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0,0,0,0.985326475791887,0.44024217006613,0,0,0.25248486685276,0.126995788584338,0,0,0,0,0,0,0.336393253036082,0.87192013766656,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0.266422179016099,6.0050757336422,2.17048642156577,0,0,6.04166312862328,2.37585561880029,0,0.871533458600294,0.599837947092342,0,0,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,1.27047312111232,37.7405576187103,22.4253755705532,21.7771144934653,15.3105300396759,0,0,0.414415513436035,0.12269149171914,1.00034104211935,0.271265023699736,0,0,0,0,1.20378439891088,0,1.03473071292505,0,0.184369168541703,0.260650843404249,0.783204629850962,0.686286847621712,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0.384417447767103,0,0.160853921143607,0,0,0.710246901252508,0.0821271560138091,0,0,0,0,0.184161977871793,0.459257792658427,0.182091168006717,0.131124414959424,0,0.385076685522074,1.56869953835371,0,0.527758144464379,0,0,0.431831832204279,0,0.541892875087706,2.00675909541941,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0.0915694648183434,0.247528499761764,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0.275673144969061,0.322260734604821,0.145016693914229,0.0852266274161009,0.890320356467374,0,0,0.127612712494584,0.2023155617111,0,0,0,1.23213432070436,0,0.869932992075073,0.74129687641568,0,0.744316738719335,0.316379424718726,0.953150969619124,0,0,0.636406495851874,0,0,0,0.235624804691373,0,1.58510321173008,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0,0,0,0.608731130888112,0,0.281695602532241,0.430234056612155,0.687743287091848,0.35667105148125,0,0,0,0.75894634753143,1.39973888097993,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0.427296284509893,0,0,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0.19538809540204,0.835218521685727,0,1.08182271390393,0,2.81974010175699,0,0.146508179271894,0.970884173996107,0.111443384277478,0,0,0,0,227.659811338482,131.80724317665,0.556543525114529,0.16480387422676,0.211125408127993,0.398495976502139,0.828851746593443,0,1.53403023753232,0.123084805461069,0.311039587661807,0,0,1.02314474045374,0.197286811273867,0,0,175.449227043235,249.360647859056,87.8300711205254,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0,9.65281445076101,2.91604613383254,4.86149985813218,54.0302245346442,73.322634684248,93.0748591534208,122.190082224003,90.142023780832,172.87569295733,0.10893846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| |||
|short_description=p1@SYN1 | |||
}} |
Revision as of 05:32, 23 January 2014
Short description: | p1@SYN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000295987, ENST00000340666, NM_006950, NM_133499, uc004did.2, uc004die.2_5end |
EntrezGene: | SYN1 |
HGNC: | 11494 |
UniProt: | P17600 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.35e-09 | 8 |
neuron | 1.49e-07 | 6 |
neuroblast | 1.49e-07 | 6 |
electrically signaling cell | 1.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.13e-11 | 10 |
neuroendocrine tumor | 1.31e-07 | 6 |