FFCP PHASE1:Hg19::chr9:138392519..138392558,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51116 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14495 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000485333,ENST00000488610_5end | |||
|coexpression_cluster_id=C1419 | |||
|description=CAGE_peak_1_at_MRPS2_5end | |||
|id=chr9:138392519..138392558,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.21e-35!254;CL:0002321!8.86e-22!248;CL:0000220!3.66e-21!246;CL:0000076!8.68e-12!62;CL:0000548!3.28e-10!679;CL:0000004!3.28e-10!679;CL:0000255!3.28e-10!679;CL:0000012!9.25e-10!682;CL:0000222!8.08e-09!119;CL:0000223!2.70e-07!59;CL:1000449!2.98e-07!16;CL:1000497!7.77e-07!18;CL:0002518!7.77e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.51e-07;15!CL:1000497;4.47e-07;17!CL:0002518;4.47e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.14e-35,253;CL:0002321,3.08e-22,250;CL:0000076,1.20e-11,63;CL:0000222,3.67e-09,121;CL:1000449,1.55e-07,15;CL:0000223,2.22e-07,58;CL:1000497,4.62e-07,17;CL:0002518,4.62e-07,17;CL:0002078,8.07e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.96e-20!235;DOID:14566!1.19e-19!239;DOID:0050687!7.89e-15!143;DOID:305!4.30e-14!106;DOID:0050686!1.14e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.96e-20,235;DOID:14566,1.19e-19,239;DOID:0050687,7.89e-15,143;DOID:305,4.30e-14,106;DOID:0050686,1.14e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0003104!9.15e-14!238;UBERON:0009142!9.15e-14!238;UBERON:0002100!7.86e-11!216;UBERON:0005177!3.74e-10!107;UBERON:0003914!1.08e-09!118;UBERON:0000481!2.49e-09!347;UBERON:0009569!1.23e-08!113;UBERON:0000490!2.04e-08!138;UBERON:0000119!5.42e-08!312;UBERON:0000483!1.78e-07!309;UBERON:0001048!2.11e-07!168;UBERON:0001041!2.14e-07!98;UBERON:0005256!2.28e-07!143;UBERON:0004211!2.98e-07!16;UBERON:0001285!2.98e-07!16;UBERON:0007684!2.98e-07!16;UBERON:0003220!2.98e-07!16;UBERON:0004208!2.98e-07!16;UBERON:0002113!3.38e-07!27;UBERON:0003918!3.38e-07!27;UBERON:0005095!3.38e-07!27;UBERON:0007687!3.38e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.22e-08;30!UBERON:0001008;1.22e-08;30!UBERON:0002113;2.95e-08;24!UBERON:0011143;2.95e-08;24!UBERON:0006555;1.51e-07;15!UBERON:0004819;1.51e-07;15!UBERON:0001285;1.51e-07;15!UBERON:0007684;1.51e-07;15!UBERON:0000353;2.15e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.52e-12,199;UBERON:0005177,4.73e-11,101;UBERON:0000490,4.37e-10,148;UBERON:0003104,7.91e-10,160;UBERON:0009142,7.91e-10,160;UBERON:0003914,1.02e-09,117;UBERON:0009569,1.10e-08,112;UBERON:0000119,3.63e-08,309;UBERON:0000483,1.21e-07,306;UBERON:0007503,1.52e-07,78;UBERON:0004211,1.55e-07,15;UBERON:0009773,1.55e-07,15;UBERON:0001231,1.55e-07,15;UBERON:0001285,1.55e-07,15;UBERON:0007684,1.55e-07,15;UBERON:0004208,1.55e-07,15;UBERON:0000353,2.18e-07,15;UBERON:0002113,2.42e-07,26;UBERON:0003918,2.42e-07,26;UBERON:0011143,2.42e-07,26;UBERON:0005095,2.42e-07,26;UBERON:0007687,2.42e-07,26 | |||
|phase1_expression=47.0547002310742,74.9351833618441,49.3340414335899,72.0527748142539,67.0441641640932,62.8083737352265,101.319951267324,104.233779115427,167.158802047897,154.075178186446,620.345238327488,79.949542199643,84.6692000113336,75.1261762467483,119.634452637778,91.4362199174414,92.8149573156924,89.8281411176469,75.1416510137381,144.174759007919,190.536645622132,142.308443551052,47.2289378766244,69.1215846618065,64.5289167517286,98.4968800091092,108.701180431728,114.051922123521,21.6350352266897,19.1914699048606,39.7877436922315,253.760257956184,301.507124697028,227.028962242408,112.482375242598,121.554693776745,78.9785181810739,19.3898392986157,29.4800337781108,22.5691305544486,27.0937723830308,34.9805159300498,23.9545277899793,28.9342495171334,20.4053009591957,22.3177336292791,14.8754583619638,16.0355476328512,10.8397229813286,7.19230980805376,11.2710710872804,5.67557351732605,13.1003358679915,15.4916324060118,20.3139729891513,19.3889609728883,17.4659936037021,12.5845151289247,11.3251040177234,10.9115869205872,7.67204550958849,17.1522676097092,14.5608470063791,10.2293940127847,10.1573233520004,14.7520158419696,14.3249117268982,11.0549412712967,9.38669253156363,10.6422533905507,13.9241885605675,10.3117738076518,8.22802207346299,28.941974224736,35.7175223941273,24.7397201699884,36.8437910160504,35.4417467105955,31.0200382325365,21.9459812680761,28.644001516669,19.9103927603451,49.2789484491704,40.9603958446599,39.1384071699964,27.737464466823,34.0336588980611,29.8871268776331,37.6795577487371,33.3918814087377,19.9224539188307,15.2681669236444,24.4654866000146,47.5816782884493,25.7833938971507,66.8995575328696,20.6545258619525,30.2618287316857,33.7186458359195,43.8028617923577,49.2142622616721,35.508585430105,42.8618802497405,43.2272572714473,38.8879797866785,35.2238892387958,36.0169138807471,54.4388108834119,54.8850446702686,50.1535609041212,64.1132041263168,37.9642042312919,46.4136942697249,39.8635833853672,48.0863409502893,43.3974782531678,29.124757513746,39.5171562305024,26.5670676620478,36.316457232947,30.6009223312517,27.5631092890028,45.1725357233318,35.1963180674651,28.7340671070395,35.7533650586466,32.8451198768419,28.0233373082378,31.0230627108869,24.7649730639586,99.9608151887243,117.372650448136,73.6488356218735,106.985989105832,82.2194173442859,67.2087847978222,41.3548692466572,62.77589826904,54.357519869339,60.0886667123548,69.5651502689558,47.9383416321628,205.462542596994,156.841819297814,29.8583602162309,33.0846500868608,41.3499257213671,23.6105718062289,20.5918167880846,16.3441300585009,110.114373681155,129.895423861025,122.887737569088,119.279975745966,133.82032015096,161.21917257688,150.267380939967,52.4586021113738,55.4995369791268,56.5677835572293,147.032700744839,104.157278483436,128.376642270337,142.285612093851,119.9010082865,70.8146845292753,81.0551035180473,94.8188665669573,154.849803840542,157.578099488309,131.722053885963,2.63560834872127,3.87780264148325,162.663081449165,58.1457183483523,56.8570997373963,29.9244748637875,36.7150874558482,59.584288209324,81.2982520206345,84.3317066264669,125.307114595917,64.1094732923519,69.2412854438197,91.21174193731,95.2038219886619,66.8364072396799,95.1345013245214,105.510105968648,161.443525497079,124.49075089965,125.420044551541,141.962572210851,152.248674465237,63.2877930890169,82.2989925988845,64.9919163595565,46.3321114340001,58.1077283804609,221.16921095094,185.40348058859,70.3644956327997,90.2104528276862,68.9889647555616,60.5789116815556,45.0537059824559,55.5880817954408,76.5667236330142,47.1794741861707,61.0774132021103,52.5591114875713,57.9175815442896,60.2857296044868,39.6766431670269,54.5322389051558,41.181425066869,63.0417423392955,55.7878641079493,60.7529331039176,70.3160347161832,51.4763909149091,61.9625404099988,59.8548890856021,67.8345594603172,86.1877741067037,89.7698383567582,129.53607590963,129.879172955056,120.60931269856,112.264922581646,154.67268158676,117.887686981493,79.7892614882061,77.1889125831462,139.516270566005,64.5471419964451,72.9098276486281,120.199708840481,100.982229356783,110.624062716518,109.080739032338,108.939722046203,108.907214171993,117.842563331984,98.6993969580491,129.659791890934,208.897993658775,213.167496181238,90.1347084815766,99.9659237421685,86.193423678845,118.922093217993,73.2579484284941,48.1194778361969,60.5103117632119,71.5437768944852,124.786074509607,187.710927940225,118.021013611255,103.143527906602,75.9133351373057,183.028522209206,86.598805215164,62.7183490915166,52.7165037118839,92.5388930148483,108.338609942927,74.5796276759625,138.285769642873,157.961453825457,22.1595305478658,34.6326312406072,35.9687412738722,70.3003754900827,52.9143703826408,73.8648256632834,85.4388306585173,80.5056009683675,184.023685999301,28.0818045600688,35.6596157753565,24.8793738648926,22.338592779629,23.2286077504539,98.9932172014915,175.332687331249,158.243553733563,184.758241704522,84.1128890313186,130.649230162104,74.6006989165809,144.985492058551,141.251062301983,101.720202433658,61.2747932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| |||
|short_description=p1@MRPS2 | |||
}} |
Revision as of 04:03, 23 January 2014
Short description: | p1@MRPS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPS2_5end |
Coexpression cluster: | C1419_Mesenchymal_Alveolar_Renal_Bronchial_Keratocytes_Trabecular_Pericytes |
Association with transcript: | 0bp_to_ENST00000485333, ENST00000488610_5end |
EntrezGene: | MRPS2 |
HGNC: | 14495 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.14e-35 | 253 |
embryonic cell | 3.08e-22 | 250 |
squamous epithelial cell | 1.20e-11 | 63 |
mesodermal cell | 3.67e-09 | 121 |
epithelial cell of nephron | 1.55e-07 | 15 |
endodermal cell | 2.22e-07 | 58 |
kidney cell | 4.62e-07 | 17 |
kidney epithelial cell | 4.62e-07 | 17 |
meso-epithelial cell | 8.07e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.52e-12 | 199 |
trunk region element | 4.73e-11 | 101 |
unilaminar epithelium | 4.37e-10 | 148 |
mesenchyme | 7.91e-10 | 160 |
entire embryonic mesenchyme | 7.91e-10 | 160 |
epithelial tube | 1.02e-09 | 117 |
subdivision of trunk | 1.10e-08 | 112 |
cell layer | 3.63e-08 | 309 |
epithelium | 1.21e-07 | 306 |
epithelial vesicle | 1.52e-07 | 78 |
nephron epithelium | 1.55e-07 | 15 |
renal tubule | 1.55e-07 | 15 |
nephron tubule | 1.55e-07 | 15 |
nephron | 1.55e-07 | 15 |
uriniferous tubule | 1.55e-07 | 15 |
nephrogenic mesenchyme | 1.55e-07 | 15 |
parenchyma | 2.18e-07 | 15 |
kidney | 2.42e-07 | 26 |
kidney mesenchyme | 2.42e-07 | 26 |
upper urinary tract | 2.42e-07 | 26 |
kidney rudiment | 2.42e-07 | 26 |
kidney field | 2.42e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.96e-20 | 235 |
disease of cellular proliferation | 1.19e-19 | 239 |
cell type cancer | 7.89e-15 | 143 |
carcinoma | 4.30e-14 | 106 |
organ system cancer | 1.14e-07 | 137 |