FFCP PHASE1:Hg19::chr9:113800994..113801032,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3166 | |||
|TSSclassifier=strong | |||
|UniProt=B4DQ18 | |||
|association_with_transcript=-13bp_to_ENST00000538760,uc011lwo.1_5end | |||
|coexpression_cluster_id=C2016 | |||
|description=CAGE_peak_3_at_LPAR1_5end | |||
|id=chr9:113800994..113801032,- | |||
|ontology_enrichment_celltype=CL:0000055!2.36e-21!180;CL:0000057!1.03e-19!75;CL:0000680!8.31e-11!57;CL:0000056!8.31e-11!57;CL:0000355!8.31e-11!57;CL:0000187!7.67e-10!54;CL:0000183!4.12e-09!59;CL:0002620!8.08e-09!23;CL:0000192!1.58e-08!42;CL:0000514!1.58e-08!42;CL:0000393!3.60e-07!60;CL:0000211!3.60e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.42e-09;23!CL:0000057;3.51e-08;73!CL:0000192;8.09e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.07e-20,76;CL:0000680,1.10e-11,58;CL:0000056,1.10e-11,58;CL:0000355,1.10e-11,58;CL:0000187,1.18e-10,55;CL:0002620,2.74e-09,23;CL:0000192,3.70e-09,43;CL:0000514,3.70e-09,43;CL:0000393,7.91e-08,61;CL:0000211,7.91e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;8.09e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.02e-27!365;UBERON:0000914!1.70e-19!83;UBERON:0002329!1.70e-19!83;UBERON:0003077!1.70e-19!83;UBERON:0003059!1.70e-19!83;UBERON:0007282!1.70e-19!83;UBERON:0009618!1.70e-19!83;UBERON:0007285!1.70e-19!83;UBERON:0000468!3.83e-17!659;UBERON:0003102!4.77e-17!95;UBERON:0000481!5.23e-17!347;UBERON:0000486!6.65e-16!82;UBERON:0005256!1.26e-15!143;UBERON:0000467!8.22e-15!625;UBERON:0000480!1.53e-14!626;UBERON:0004290!3.62e-14!70;UBERON:0002100!2.30e-13!216;UBERON:0000119!6.75e-13!312;UBERON:0000483!2.39e-12!309;UBERON:0002385!6.66e-12!63;UBERON:0001015!6.66e-12!63;UBERON:0000383!6.66e-12!63;UBERON:0001134!1.55e-11!61;UBERON:0002036!1.55e-11!61;UBERON:0003082!1.55e-11!61;UBERON:0000062!2.27e-11!511;UBERON:0002050!2.76e-11!605;UBERON:0005423!2.76e-11!605;UBERON:0007023!3.09e-11!115;UBERON:0000923!3.12e-11!604;UBERON:0005291!3.12e-11!604;UBERON:0006598!3.12e-11!604;UBERON:0002532!3.12e-11!604;UBERON:0000922!5.60e-11!612;UBERON:0000479!2.11e-10!787;UBERON:0000477!2.64e-10!286;UBERON:0000033!3.97e-10!123;UBERON:0000153!2.72e-09!129;UBERON:0007811!2.72e-09!129;UBERON:0004111!1.90e-08!241;UBERON:0003104!9.38e-08!238;UBERON:0009142!9.38e-08!238;UBERON:0004121!1.07e-07!169;UBERON:0000161!2.28e-07!35;UBERON:0001049!2.47e-07!57;UBERON:0005068!2.47e-07!57;UBERON:0006241!2.47e-07!57;UBERON:0007135!2.47e-07!57;UBERON:0002199!2.76e-07!45;UBERON:0002416!2.76e-07!45;UBERON:0002616!3.38e-07!59;UBERON:0000924!3.92e-07!173;UBERON:0006601!3.92e-07!173;UBERON:0000075!4.50e-07!13;UBERON:0005944!4.50e-07!13;UBERON:0004288!4.50e-07!13;UBERON:0003089!4.50e-07!13;UBERON:0000165!8.76e-07!28;UBERON:0000930!8.76e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;2.08e-09;16!UBERON:0002204;4.18e-07;70!UBERON:0000165;6.86e-07;28!UBERON:0002384;7.17e-07;198!UBERON:0002385;7.51e-07;31!UBERON:0001015;7.51e-07;31!UBERON:0000383;7.51e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.64e-18,99;UBERON:0000486,7.68e-17,83;UBERON:0007524,7.56e-16,73;UBERON:0003077,2.34e-15,72;UBERON:0007285,2.34e-15,72;UBERON:0002329,2.83e-15,71;UBERON:0003059,2.83e-15,71;UBERON:0007282,2.83e-15,71;UBERON:0004290,2.83e-15,71;UBERON:0009618,2.83e-15,71;UBERON:0003104,1.02e-13,160;UBERON:0009142,1.02e-13,160;UBERON:0007503,4.06e-13,78;UBERON:0005256,4.10e-13,122;UBERON:0002385,7.44e-13,64;UBERON:0001015,7.44e-13,64;UBERON:0000383,7.44e-13,64;UBERON:0000119,9.04e-13,309;UBERON:0001134,1.83e-12,62;UBERON:0002036,1.83e-12,62;UBERON:0003082,1.83e-12,62;UBERON:0010314,2.83e-12,132;UBERON:0000483,3.32e-12,306;UBERON:0000479,1.08e-10,773;UBERON:0007023,1.51e-10,114;UBERON:0002050,2.12e-09,564;UBERON:0000075,2.51e-09,16;UBERON:0000923,5.61e-09,560;UBERON:0010316,5.61e-09,560;UBERON:0005291,5.61e-09,560;UBERON:0006598,5.61e-09,560;UBERON:0010317,5.61e-09,560;UBERON:0002532,5.61e-09,560;UBERON:0002100,7.32e-09,199;UBERON:0005423,2.06e-08,581;UBERON:0004111,2.67e-08,240;UBERON:0002199,3.32e-08,46;UBERON:0002416,3.32e-08,46;UBERON:0000161,5.41e-08,36;UBERON:0011137,5.85e-08,14;UBERON:0000922,9.74e-08,592;UBERON:0000165,2.26e-07,29;UBERON:0000930,2.26e-07,29;UBERON:0004923,3.86e-07,66;UBERON:0002097,6.51e-07,41;UBERON:0004121,7.15e-07,171;UBERON:0000924,7.15e-07,171;UBERON:0006601,7.15e-07,171 | |||
|phase1_expression=16.3510541343501,13.7024335290229,42.1453668246954,24.0175916047513,33.0751209876193,29.6595098194125,5.06599756336621,11.370957721683,15.6711376919903,4.42321085702716,6.97801167972428,1.31064823278103,1.84636884759917,26.60976588641,34.4653270757032,2.6893005858071,3.01347264011988,2.92124036154949,2.43966399395253,1.10808952269109,6.12002073732759,0,0.572471974262113,0.410623275218653,1.00434111675842,0.993374274723366,1.64201178899891,1.8890587515283,0,0,0,1.83884244895785,3.0120591877825,0.369754010166788,0,0,0,0.553995408531877,1.00272223735071,0.434021741431704,4.25439401055856,1.94336199611388,5.92423805558629,0.145398238779565,0,0.485168122375632,2.09186133215116,1.6446715520873,0.619412741790207,1.7261543539329,0,0.236482229888585,1.37898272294647,0,0,0.941211697713023,0,1.34834090667051,1.22433556948361,0.962787081228281,0,0.659702600373432,0,0.426224750532694,0.290209238628584,0,0.622822248995575,1.00499466102697,2.08593167368081,1.08594422352558,1.21079900526674,0,0.949387162322653,0.211255286311942,0,0,1.12328631146495,1.05123824989054,1.76798145366788,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,2.43806866313962,2.68280343881454,2.68511379871414,22.7706666002277,10.5280961233537,18.8300474649071,4.7717156823066,9.24606253575008,0.472674085820339,0.443458794925128,0.43917392846563,2.68507104770311,1.45718115317017,0.741568885568859,1.29818957461873,0.870648686496336,0.531831842075461,0,0,0,0,2.58070378531837,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,1.3082821564276,16.4000744059455,8.23098325819768,2.64818361626438,6.88407889797153,8.15737279056221,1.68203280042692,1.06748995729705,0.24666754841716,7.15785381419462,2.2900814251847,1.47115712802113,7.26515652695671,1.72852777344,9.13853584151807,4.99456122928513,1.71141546463335,12.8525865274549,12.3306223575953,17.3204050473901,11.0956137294776,50.0177719574489,27.7605557124596,74.7045397900784,51.0841228631283,49.9479197142685,14.5625817910084,11.4978902690598,31.8155255373185,42.7905337962117,57.0752077897417,32.484343945182,16.243853177348,55.888557913254,1.02088964844019,7.71375433462106,3.41691822109708,6.78182083710598,9.60291507470087,6.28620428354477,8.24449728146013,13.5865305122061,4.21940830603166,6.33340533547791,12.8741224864498,5.43094401989566,5.4959659318396,5.68015348026583,7.7579115635283,9.49539316938731,3.86521706326594,7.36414525595254,5.73609190778008,0.243947412259191,0,0.116193942869518,0.10366105501537,0.252320850875628,0.72995471815166,7.8224766164908,3.85944562915731,6.90674606762403,7.42988684851167,15.8813485967309,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.057870056657,2.94017422771084,0,0,0.590789906681404,0,0.860919069801795,0.343135620597051,2.19500570817251,0,2.11110842064425,1.85176890317059,12.3807156017923,16.6389565644733,2.88662684050547,0.231860809950154,0.352226082707465,0,0,0,0,0,4.43190610957315,2.57404691653161,2.22946743433092,4.68669169933885,3.35964256397719,3.1190521393325,1.52249488594842,1.16253575405585,1.15014803749563,0,0,0,0,0.50496973370552,0.190493682876507,0,0,0,1.02827492703324,0,0,9.64327325370102,1.74384027533312,8.0672114403045,2.97324946242889,3.57656445851882,5.071816515336,1.86156681609409,3.12022310734098,4.11531798819427,11.3479305618623,13.0546867717889,9.86548156241218,9.76718889704597,4.93944202068461,5.21177894869976,8.17401482107855,0,2.71295439353627,0,1.09970290300263,0,1.00451418286425,0,3.35474797688216,2.29723871668228,0,9.26600362672507,16.0271531589299,4.1184021545176,0,0,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,0,36.3166815488654,11.0037514633129,30.3816826543704,4.78332981520856,11.7763132606127,6.30809660135739,11.831282914264,9.63027519128701,2.27407504055985,16.5556914068008,9.96338397803155,6.26855173041791,20.4176493999995,4.69922777910577,2.74514739048685,0.206768026122887,0.431428401637234,0.320182673410333,0.606255142892519,0,2.41912234663744,6.69891081110698,2.14846762603287,5.89386198309454,16.273671955474,8.18731598506726,5.46903331888265,14.8418066444991,6.16838775210622,2.30830242907065,15.3577781745823,4.67328986265259,7.90230573527723,2.05461064305758,4.61164881697555,2.20994373446151,10.4481147829792,19.6658461447254,18.3574180943194,0,1.00119938235739,1.56869953835371,1.46139224653261,1.37217117560738,0,0,1.29549549661284,0,1.89662506280697,0.501689773854853,1.01950509218015,1.66215201785745,0.223874754722178,0,0,0.512900250232778,0,0,3.50339439602256,1.55668090191184,0.990113999047056,4.59412430396938,2.60024098414608,11.2478750890912,6.96029171703278,3.38906957652218,4.60511024178389,9.37288692894808,10.6346042419591,8.1209348591968,6.13631717395926,3.29418531892928,2.31398881505369,3.0750410778417,2.93509238737543,2.2254711788221,3.253918845081,8.81474571125792,7.6674099717666,3.69640296211307,1.06461206063404,5.21959795245044,2.7798632865588,3.72124705529177,5.21021717103534,9.80776216628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| |||
|short_description=p3@LPAR1 | |||
}} |
Revision as of 02:45, 23 January 2014
Short description: | p3@LPAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LPAR1_5end |
Coexpression cluster: | C2016_Fibroblast_corpus_Nucleus_Anulus_globus_tridermal_Synoviocyte |
Association with transcript: | -13bp_to_ENST00000538760, uc011lwo.1_5end |
EntrezGene: | LPAR1 |
HGNC: | 3166 |
UniProt: | B4DQ18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.07e-20 | 76 |
muscle precursor cell | 1.10e-11 | 58 |
myoblast | 1.10e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.10e-11 | 58 |
muscle cell | 1.18e-10 | 55 |
skin fibroblast | 2.74e-09 | 23 |
smooth muscle cell | 3.70e-09 | 43 |
smooth muscle myoblast | 3.70e-09 | 43 |
electrically responsive cell | 7.91e-08 | 61 |
electrically active cell | 7.91e-08 | 61 |