FFCP PHASE1:Hg19::chr9:72435749..72435764,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=138255 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31422 | |||
|TSSclassifier=strong | |||
|UniProt=E9PIA3 | |||
|association_with_transcript=5bp_to_ENST00000466872,ENST00000529131_5end | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_2_at_C9orf135_5end | |||
|id=chr9:72435749..72435764,+ | |||
|ontology_enrichment_celltype=CL:0002322!9.17e-18!5;CL:0000039!4.31e-08!7;CL:0000586!4.31e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.14e-36;5!CL:0000039;2.57e-16;7!CL:0000586;2.57e-16;7!CL:0002321;6.64e-12;15!CL:0000540;2.18e-11;6!CL:0000404;2.18e-11;6!CL:0000148;4.65e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.32e-36,5;CL:0000039,2.52e-16,7;CL:0000586,2.52e-16,7;CL:0000540,2.14e-11,6;CL:0000031,2.14e-11,6;CL:0000404,2.14e-11,6;CL:0000047,1.16e-08,8;CL:0000148,4.65e-07,10;CL:0000541,4.65e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.00e-24;10!UBERON:0005564;2.00e-24;10!CL:0000031;2.18e-11;6!UBERON:0000358;3.97e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;7.85e-08;22!DOID:2994;7.85e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.79e-08,22;DOID:2994,7.79e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.35e-15!8;UBERON:0003135!3.21e-14!11;UBERON:0002298!2.40e-13!8;UBERON:0007023!2.63e-11!115;UBERON:0001896!4.24e-10!3;UBERON:0005290!4.24e-10!3;UBERON:0010096!4.24e-10!3;UBERON:0006331!1.25e-09!3;UBERON:0000007!7.35e-08!2;UBERON:0003127!1.17e-07!2;UBERON:0000341!3.06e-07!2;UBERON:0000991!6.64e-07!21;UBERON:0009196!6.64e-07!21;UBERON:0009117!6.64e-07!21;UBERON:0005564!6.64e-07!21;UBERON:0002148!6.67e-07!2;UBERON:0009662!6.67e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.24e-30;8!UBERON:0003135;3.62e-22;11!UBERON:0000007;6.58e-15;2!UBERON:0003127;1.52e-14;2!UBERON:0000922;9.96e-12;49!UBERON:0000991;2.20e-11;21!UBERON:0003101;7.64e-11;22!UBERON:0000079;7.64e-11;22!UBERON:0003296;6.82e-08;4!UBERON:0010133;6.82e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.60e-31,8;UBERON:0003135,3.01e-22,11;UBERON:0000007,6.35e-15,2;UBERON:0003127,1.68e-14,2;UBERON:0000991,2.00e-11,21;UBERON:0009196,2.00e-11,21;UBERON:0009117,2.00e-11,21;UBERON:0005564,2.00e-11,21;UBERON:0004176,6.99e-11,22;UBERON:0003101,6.99e-11,22;UBERON:0000079,6.99e-11,22;UBERON:0003296,6.71e-08,4;UBERON:0010133,6.71e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0.822189523018381,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7597403929945,24.1204178345103,32.0695282319871,14.2015645371057,40.8759778418518,20.0737547491706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,2.25595660617181,0.980312671588698,1.1747511088309,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,1.02956998717179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5409218943126,17.054890138057,24.5109799437219,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,4.83110221544025,0,0,0,0,0,0,0,0.146552233678082,0,0.387848869084652,0.13223260174269,0,0,0.427149650270779,1.72924735609633,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,3.44045517414043,0.443716206147409,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82731361184183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06965604236632,5.91921697513374,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0.470317296361523,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,13.6581964954619,0,7.34319574142268,11.4903484264191,39.3310170009136,2.50707539292375,1.81868875723775,2.94760543171796,0,0,0.213233981900981,1.42838658878244,0,0,0,0,0,0,0,0,5.23572099366537,1.33064142618405,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0,0 | |||
|short_description=p2@C9orf135 | |||
}} |
Revision as of 01:37, 23 January 2014
Short description: | p2@C9orf135 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C9orf135_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 5bp_to_ENST00000466872, ENST00000529131_5end |
EntrezGene: | C9orf135 |
HGNC: | 31422 |
UniProt: | E9PIA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.32e-36 | 5 |
germ line cell | 2.52e-16 | 7 |
germ cell | 2.52e-16 | 7 |
neuron | 2.14e-11 | 6 |
neuroblast | 2.14e-11 | 6 |
electrically signaling cell | 2.14e-11 | 6 |
neuronal stem cell | 1.16e-08 | 8 |
melanocyte | 4.65e-07 | 10 |
melanoblast | 4.65e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 9.60e-31 | 8 |
male reproductive organ | 3.01e-22 | 11 |
pituitary gland | 6.35e-15 | 2 |
open tracheal system trachea | 1.68e-14 | 2 |
gonad | 2.00e-11 | 21 |
indifferent external genitalia | 2.00e-11 | 21 |
indifferent gonad | 2.00e-11 | 21 |
gonad primordium | 2.00e-11 | 21 |
external genitalia | 6.99e-11 | 22 |
male organism | 6.99e-11 | 22 |
male reproductive system | 6.99e-11 | 22 |
gland of diencephalon | 6.71e-08 | 4 |
neuroendocrine gland | 6.71e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.79e-08 | 22 |
germ cell cancer | 7.79e-08 | 22 |