FFCP PHASE1:Hg19::chr8:128265552..128265583,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_at_chr8:128265552..128265583,- | |||
|id=chr8:128265552..128265583,- | |||
|ontology_enrichment_celltype=CL:0000946!1.70e-17!1;CL:0000786!1.70e-17!1;CL:0000980!1.70e-17!1;CL:0000785!2.02e-09!2;CL:0000955!2.02e-09!2;CL:0000818!2.02e-09!2;CL:0000954!2.02e-09!2;CL:0000816!2.02e-09!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.17e-54;29!UBERON:0006595;3.21e-08;86 | |||
|ontology_enrichment_disease=DOID:305!6.80e-15!106;DOID:0050687!7.92e-11!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.88e-18,106;DOID:0050687,1.96e-13,143;DOID:162,6.25e-08,235;DOID:14566,9.40e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.31e-147!9;UBERON:0001557!8.65e-70!19;UBERON:0008947!1.08e-34!38;UBERON:0003258!1.08e-34!38;UBERON:0000072!1.43e-28!46;UBERON:0000065!1.00e-24!53;UBERON:0001004!4.80e-18!72;UBERON:0000063!2.44e-16!97;UBERON:0001041!4.42e-13!98;UBERON:0000077!1.11e-09!130;UBERON:0004921!1.11e-09!129;UBERON:0004185!1.11e-09!129;UBERON:0001007!6.21e-08!155;UBERON:0001555!6.21e-08!155;UBERON:0007026!6.21e-08!155;UBERON:0001048!2.63e-07!168;UBERON:0004119!3.28e-07!169;UBERON:0000925!3.28e-07!169;UBERON:0006595!3.28e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.75e-176;9!UBERON:0001557;4.75e-176;9!UBERON:0000072;1.18e-39;37!UBERON:0000065;1.67e-33;44!UBERON:0001004;1.73e-17;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.87e-176,9;UBERON:0001557,1.52e-83,19;UBERON:0008947,9.73e-42,38;UBERON:0003258,9.73e-42,38;UBERON:0000072,1.03e-33,47;UBERON:0000065,2.57e-29,54;UBERON:0001004,2.54e-21,74;UBERON:0001041,4.35e-18,87;UBERON:0004921,4.04e-13,118;UBERON:0001007,1.31e-10,145;UBERON:0001555,1.31e-10,145;UBERON:0007026,1.31e-10,145;UBERON:0001048,1.23e-09,160;UBERON:0004119,1.42e-09,160;UBERON:0000925,1.42e-09,160;UBERON:0006595,1.42e-09,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19428360107579,3.03452442140583,1.68707720918437,6.50734439121124,3.05031221729369,1.42362371466658,1.34831308160164,1.96221465125346,1.53898862778556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1524383839052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:128265552..128265583,- | |||
}} | |||
Revision as of 23:46, 22 January 2014
| Short description: | p@chr8:128265552..128265583, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | No |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr8:128265552..128265583, - |
| Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 2.35e-07 | 253 |
| Ontology term | p-value | n |
|---|---|---|
| larynx | 2.87e-176 | 9 |
| upper respiratory tract | 1.52e-83 | 19 |
| respiratory primordium | 9.73e-42 | 38 |
| endoderm of foregut | 9.73e-42 | 38 |
| segment of respiratory tract | 1.03e-33 | 47 |
| respiratory tract | 2.57e-29 | 54 |
| respiratory system | 2.54e-21 | 74 |
| foregut | 4.35e-18 | 87 |
| subdivision of digestive tract | 4.04e-13 | 118 |
| digestive system | 1.31e-10 | 145 |
| digestive tract | 1.31e-10 | 145 |
| primitive gut | 1.31e-10 | 145 |
| primordium | 1.23e-09 | 160 |
| endoderm-derived structure | 1.42e-09 | 160 |
| endoderm | 1.42e-09 | 160 |
| presumptive endoderm | 1.42e-09 | 160 |
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 2.88e-18 | 106 |
| cell type cancer | 1.96e-13 | 143 |
| cancer | 6.25e-08 | 235 |
| disease of cellular proliferation | 9.40e-08 | 239 |
