FFCP PHASE1:Hg19::chr7:150553614..150553634,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=80 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=55bp_to_CU680774,JF432306_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_2_at_ABP1_5end | |||
|id=chr7:150553614..150553634,+ | |||
|ontology_enrichment_celltype=CL:0000453!6.88e-20!5;CL:0002541!1.22e-19!3;CL:0000990!4.10e-11!8;CL:0000451!4.14e-09!10;CL:0002231!6.09e-09!3;CL:0000313!3.41e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002541;8.11e-51;3!CL:0000453;1.91e-30;5!CL:0000990;2.99e-17;8!CL:0000451;3.08e-14;10!CL:0000349;1.35e-08;19!CL:0002231;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.11e-51,3;CL:0000453,1.91e-30,5;CL:0000990,2.99e-17,8;CL:0000451,3.08e-14,10;CL:0000349,1.35e-08,19;CL:0002231,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.33e-17;1 | |||
|ontology_enrichment_disease=DOID:2152!3.41e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!1.22e-19!3;UBERON:0000920!1.22e-19!3;UBERON:0003124!1.40e-14!7;UBERON:0005631!6.24e-11!14;UBERON:0000158!6.24e-11!14;UBERON:0000160!3.00e-07!27;UBERON:0004911!3.41e-07!1;UBERON:0001301!4.34e-07!1;UBERON:0000997!6.57e-07!1;UBERON:0005056!6.57e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;8.11e-51;3!UBERON:0000920;8.11e-51;3!UBERON:0002108;8.14e-30;4!UBERON:0005631;8.65e-16;10!UBERON:0000158;8.65e-16;10!UBERON:0000478;1.84e-11;24!UBERON:0000160;9.12e-09;17!UBERON:0005409;5.59e-07;22!UBERON:0002114;9.91e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.11e-51,3;UBERON:0003124,2.54e-38,7;UBERON:0002108,8.56e-30,4;UBERON:0005631,2.11e-19,14;UBERON:0000158,2.11e-19,14;UBERON:0000478,1.81e-11,24;UBERON:0000160,9.24e-09,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,7.97502899329799,18.0447259001669,15.4580085045404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.86686278029118,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2761994568815,5.18172877222116,6.05191958746624,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5966426629275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,1.62065732026684,1.09279780251979,13.6392015944842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ABP1 | |||
}} |
Revision as of 20:04, 22 January 2014
Short description: | p2@ABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABP1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 55bp_to_CU680774, JF432306_5end |
EntrezGene: | ABP1 |
HGNC: | 80 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.11e-51 | 3 |
Langerhans cell | 1.91e-30 | 5 |
conventional dendritic cell | 2.99e-17 | 8 |
dendritic cell | 3.08e-14 | 10 |
extraembryonic cell | 1.35e-08 | 19 |
epithelial cell of prostate | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.11e-51 | 3 |
chorion | 2.54e-38 | 7 |
small intestine | 8.56e-30 | 4 |
extraembryonic membrane | 2.11e-19 | 14 |
membranous layer | 2.11e-19 | 14 |
extraembryonic structure | 1.81e-11 | 24 |
intestine | 9.24e-09 | 17 |