FFCP PHASE1:Hg19::chr7:116312193..116312211,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4233 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7029 | |||
|TSSclassifier=strong | |||
|UniProt=C9JVH4 | |||
|association_with_transcript=-36bp_to_ENST00000437703_5end | |||
|coexpression_cluster_id=C1534 | |||
|description=CAGE_peak_5_at_MET_5end | |||
|id=chr7:116312193..116312211,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.69e-34!254;CL:0002076!1.35e-10!43;CL:0000223!3.87e-09!59;CL:0000076!1.45e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.35e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.18e-33,253;CL:0002076,3.97e-10,42;CL:0000223,4.32e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.41e-11;29 | |||
|ontology_enrichment_disease=DOID:305!2.52e-21!106;DOID:0050687!1.78e-19!143;DOID:14566!2.59e-10!239;DOID:162!1.81e-09!235;DOID:299!1.37e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;3.90e-11;25!DOID:1749;3.07e-07;14!DOID:305;6.23e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.63e-25,106;DOID:0050687,6.54e-23,143;DOID:14566,4.56e-12,239;DOID:162,1.89e-11,235;DOID:299,5.98e-11,25;DOID:1749,2.40e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.80e-16!169;UBERON:0000925!5.80e-16!169;UBERON:0006595!5.80e-16!169;UBERON:0001007!1.26e-13!155;UBERON:0001555!1.26e-13!155;UBERON:0007026!1.26e-13!155;UBERON:0000077!1.01e-12!130;UBERON:0004921!2.35e-12!129;UBERON:0004185!2.35e-12!129;UBERON:0008947!9.82e-10!38;UBERON:0003258!9.82e-10!38;UBERON:0000064!1.27e-09!219;UBERON:0000065!2.10e-09!53;UBERON:0000062!2.23e-08!511;UBERON:0001004!3.26e-08!72;UBERON:0001041!4.38e-08!98;UBERON:0000481!5.67e-08!347;UBERON:0004175!2.48e-07!25;UBERON:0000467!2.97e-07!625;UBERON:0005631!3.10e-07!14;UBERON:0000158!3.10e-07!14;UBERON:0001048!3.53e-07!168;UBERON:0000480!4.22e-07!626;UBERON:0005911!4.39e-07!82;UBERON:0005177!5.41e-07!107;UBERON:0005795!6.08e-07!22;UBERON:0000072!7.03e-07!46;UBERON:0003104!8.83e-07!238;UBERON:0009142!8.83e-07!238;UBERON:0003975!8.85e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;1.81e-09;44!UBERON:0001737;8.28e-09;9!UBERON:0001557;8.28e-09;9!UBERON:0000072;2.88e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,1.01e-12,38;UBERON:0003258,1.01e-12,38;UBERON:0004119,2.00e-12,160;UBERON:0000925,2.00e-12,160;UBERON:0006595,2.00e-12,160;UBERON:0000065,1.31e-10,54;UBERON:0005177,5.36e-10,101;UBERON:0005631,9.00e-10,14;UBERON:0000158,9.00e-10,14;UBERON:0001007,1.38e-09,145;UBERON:0001555,1.38e-09,145;UBERON:0007026,1.38e-09,145;UBERON:0004921,1.46e-09,118;UBERON:0001737,4.32e-09,9;UBERON:0000072,1.04e-07,47;UBERON:0001008,1.17e-07,48;UBERON:0005911,1.76e-07,82;UBERON:0006554,2.49e-07,47;UBERON:0001041,2.51e-07,87;UBERON:0003124,4.06e-07,7;UBERON:0001004,7.86e-07,74 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,1.74467704820074,0,0,0,0.491467873003018,2.09340350391728,4.36882744260345,3.4289707169699,0,0,0,0,0,0,0,0.408001382488506,0,0.572471974262113,1.77936752594749,0.125542639594803,0,0,0,0,0,0.309632246632152,3.67768489791571,1.204823675113,2.21852406100073,0,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0.564727018627814,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,0,0.434539556882471,0,0,0.378139268656271,0.443458794925128,1.58102614247627,0.327447688744282,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0,0,0.550236083880135,1.04497483268405,0,0.35576626268671,0.66944122552934,0.805658634218294,0.760272105718513,0.976248230192678,0,0.81014194788176,0.982297011124877,1.34717623575702,0.900891843866578,0,0,0.183201743930407,0,0,0,0.496971951695318,1.2663051166458,0.132409180813219,2.29469296599051,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0.149448680551801,0,0,0,0.408308342509787,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0.554128230968366,0.438977620880838,0,0,0.226864366320042,2.51145489964407,0,0,3.90118424909723,0.515262646192195,0.257640540045629,0.558350568994769,6.24472429292685,0.974370051611986,1.26216887122057,0.460249493211497,0.323292113637624,1.06502877754984,1.61203357164224,1.18692414617341,2.12586938479627,0.545492241181669,2.29443676311203,0,0.132529768321485,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0,4.25904480143438,4.04603256187444,3.85617647813571,3.86028904563379,3.92182999366331,3.55905928666645,1.75280700608214,2.5508790466295,3.46272441251751,0,0,0,0,0,0,0,0,1.47586126251736,1.02940686179115,1.75600456653801,0,3.11639814476056,2.12953423864618,0,0,1.44331342025273,0.34779121492523,2.34817388471643,0.288732895522148,0,0.761016608938393,0,0,0,0,0,0,0,0.850650583454319,2.23896306757121,0.290633938513962,1.53353071666084,0,0,0,0,0,2.85740524314761,1.52795370223311,1.17217447210047,0,0.925447434329912,3.90445975197093,1.42913216315289,0.112131084345361,0,0.22001485746285,0,0,0,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.599837947092342,0,0,0,0.239624855491583,0,1.42636905040718,0.579125226670317,2.4657158706046,1.25342674267927,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.49076596687656,0,0.271265023699736,0.623912584592421,1.24900292158013,1.57702415033935,3.27995961979597,0.601892199455438,0,1.03473071292505,0.664225598535437,0,0.347534457872331,0,0,0,0.215714200818617,0,4.85004114314015,3.32870879020994,6.65258645325297,0,0.767309866440312,0.280660094433074,0.256278298511402,0,0,0,0.616838775210622,0.177561725313127,0.739144404124282,1.03850885836724,0.813472649219715,2.05461064305758,1.00253235151642,3.95948252424354,0.114814448164607,0.182091168006717,0.262248829918848,0.451199612907412,1.61732207919271,1.56869953835371,4.38417673959782,3.27210049567915,0,0,2.80690690932781,0,1.08378575017541,0.501689773854853,1.27438136522519,1.66215201785745,2.0148727924996,0,0,1.79515087581472,3.28014645699706,1.30151357865721,1.44257416306811,0,0.082509499920588,0.574265537996172,3.25030123018261,0,0.48335359146061,0.308097234229289,0.15350367472613,0.689182862422653,0.644521469209642,0,0.340906509664404,0,0.826424576804891,2.49847087574638,3.82838137483752,2.93357564481095,0,1.88887408098384,0.6970372701606,0.308033580176089,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0,0.78494864019923,0.359744915166629,0,0,0.202182481573316,1.58510321173008,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.92947049429925,0,0,0.392996164052485,0,1.41904425628239,1.05553817648832,0,0.379473173765715,0.349934720244983,2.11688647996127,1.34060455107157,1.08890984861323,1.31801321087491,0,0,0,3.44585100310439,0,0,0,0,0,0,0,0,0,0,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,2.19762268907841,0,0,0.568272293612826,10.5047573284584,8.31501106331388,17.5081600196562,1.9882952955326,0,1.33570446027487,0.494411622680279,0,1.59398390600856,0.276283915531148,0.251932747854276,0.20453736500431,0,0.311039587661807,15.0080146416036,1.07412704805365,0,0.493217028184668,0,0,1.93866549219044,0,0,0.520855522170466,0,1.44999915086959,2.38966241399549,3.30529745380596,9.45550727071745,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0.219385397153973,3.2681539055697,1.11538995422883,1.30815439456455,0.227884111694002,0.23056390438806,0,3.58536327342627,4.46601623624687,1.92354946143911,1.5991043280559,0,0,0,0,0,0,0,0.317873157960757,5.69694774225673,8.81457164059398,1.83758992864123,2.59666367690509,1.99052386215701,0.6192029515233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| |||
|short_description=p5@MET | |||
}} |
Revision as of 18:57, 22 January 2014
Short description: | p5@MET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MET_5end |
Coexpression cluster: | C1534_gastric_signet_endometrial_pharyngeal_papillotubular_bile_squamous |
Association with transcript: | -36bp_to_ENST00000437703_5end |
EntrezGene: | MET |
HGNC: | 7029 |
UniProt: | C9JVH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.18e-33 | 253 |
endo-epithelial cell | 3.97e-10 | 42 |
endodermal cell | 4.32e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 1.01e-12 | 38 |
endoderm of foregut | 1.01e-12 | 38 |
endoderm-derived structure | 2.00e-12 | 160 |
endoderm | 2.00e-12 | 160 |
presumptive endoderm | 2.00e-12 | 160 |
respiratory tract | 1.31e-10 | 54 |
trunk region element | 5.36e-10 | 101 |
extraembryonic membrane | 9.00e-10 | 14 |
membranous layer | 9.00e-10 | 14 |
digestive system | 1.38e-09 | 145 |
digestive tract | 1.38e-09 | 145 |
primitive gut | 1.38e-09 | 145 |
subdivision of digestive tract | 1.46e-09 | 118 |
larynx | 4.32e-09 | 9 |
segment of respiratory tract | 1.04e-07 | 47 |
renal system | 1.17e-07 | 48 |
endo-epithelium | 1.76e-07 | 82 |
urinary system structure | 2.49e-07 | 47 |
foregut | 2.51e-07 | 87 |
chorion | 4.06e-07 | 7 |
respiratory system | 7.86e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.63e-25 | 106 |
cell type cancer | 6.54e-23 | 143 |
disease of cellular proliferation | 4.56e-12 | 239 |
cancer | 1.89e-11 | 235 |
adenocarcinoma | 5.98e-11 | 25 |
squamous cell carcinoma | 2.40e-07 | 14 |