FFCP PHASE1:Hg19::chr6:143929375..143929393,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9749 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20956 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=53bp_to_ENST00000305766_5end | |||
|coexpression_cluster_id=C247 | |||
|description=CAGE_peak_5_at_PHACTR2_5end | |||
|id=chr6:143929375..143929393,+ | |||
|ontology_enrichment_celltype=CL:0002274!4.27e-08!5;CL:0000457!4.27e-08!5;CL:0002191!4.27e-08!5;CL:0000097!4.27e-08!5;CL:0000831!4.27e-08!5;CL:0002028!4.27e-08!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.97e-17;82!UBERON:0006215;2.66e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.54e-74!57;UBERON:0005068!6.54e-74!57;UBERON:0006241!6.54e-74!57;UBERON:0007135!6.54e-74!57;UBERON:0001017!3.07e-61!82;UBERON:0002616!1.74e-60!59;UBERON:0000955!1.65e-58!69;UBERON:0006238!1.65e-58!69;UBERON:0005743!7.00e-58!86;UBERON:0007023!1.44e-52!115;UBERON:0000073!2.44e-51!94;UBERON:0001016!2.44e-51!94;UBERON:0002780!6.20e-51!41;UBERON:0001890!6.20e-51!41;UBERON:0006240!6.20e-51!41;UBERON:0002020!4.33e-50!34;UBERON:0003528!4.33e-50!34;UBERON:0001893!6.98e-50!34;UBERON:0003080!1.50e-49!42;UBERON:0001869!2.27e-49!32;UBERON:0003075!6.18e-48!86;UBERON:0007284!6.18e-48!86;UBERON:0002619!1.71e-47!22;UBERON:0002791!2.28e-47!33;UBERON:0002346!2.60e-45!90;UBERON:0001950!4.60e-42!20;UBERON:0000956!2.53e-41!25;UBERON:0000203!2.53e-41!25;UBERON:0003056!9.36e-32!61;UBERON:0000033!4.76e-30!123;UBERON:0000153!1.07e-29!129;UBERON:0007811!1.07e-29!129;UBERON:0003076!7.65e-25!15;UBERON:0003057!7.65e-25!15;UBERON:0004121!1.52e-23!169;UBERON:0000924!9.86e-23!173;UBERON:0006601!9.86e-23!173;UBERON:0004733!4.44e-18!12;UBERON:0002028!4.44e-18!12;UBERON:0007277!4.44e-18!12;UBERON:0000025!4.85e-18!194;UBERON:0000200!7.29e-18!6;UBERON:0001871!2.81e-17!7;UBERON:0004732!1.53e-16!13;UBERON:0000349!4.02e-15!5;UBERON:0004111!5.24e-14!241;UBERON:0002298!8.66e-13!8;UBERON:0000477!1.96e-11!286;UBERON:0002680!3.76e-11!9;UBERON:0001895!3.76e-11!9;UBERON:0010092!3.76e-11!9;UBERON:0002420!1.47e-10!9;UBERON:0007245!1.47e-10!9;UBERON:0010009!1.47e-10!9;UBERON:0010011!1.47e-10!9;UBERON:0000454!1.47e-10!9;UBERON:0002308!2.16e-10!9;UBERON:0000125!2.16e-10!9;UBERON:0002021!4.79e-10!5;UBERON:0001872!5.87e-10!5;UBERON:0000475!6.51e-10!365;UBERON:0002771!7.30e-10!3;UBERON:0000988!1.06e-09!3;UBERON:0001896!2.49e-09!3;UBERON:0005290!2.49e-09!3;UBERON:0010096!2.49e-09!3;UBERON:0000483!4.43e-09!309;UBERON:0000064!5.32e-09!219;UBERON:0000119!6.95e-09!312;UBERON:0002240!9.62e-09!3;UBERON:0000062!3.42e-08!511;UBERON:0001870!3.50e-07!2;UBERON:0001954!3.82e-07!2;UBERON:0003022!3.82e-07!2;UBERON:0002421!3.82e-07!2;UBERON:0002600!3.82e-07!2;UBERON:0001876!4.42e-07!2;UBERON:0001897!8.34e-07!2;UBERON:0002148!8.34e-07!2;UBERON:0009662!8.34e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.11e-73;22!UBERON:0000956;1.15e-64;25!UBERON:0000203;1.15e-64;25!UBERON:0001950;1.77e-64;20!UBERON:0001869;9.19e-55;32!UBERON:0003528;5.06e-54;34!UBERON:0002020;5.06e-54;34!UBERON:0001893;1.33e-50;34!UBERON:0002791;5.65e-49;32!UBERON:0000073;2.65e-46;53!UBERON:0002616;2.65e-46;53!UBERON:0002780;8.72e-43;41!UBERON:0001890;8.72e-43;41!UBERON:0000955;1.09e-29;68!UBERON:0000200;1.93e-29;6!UBERON:0001017;4.45e-27;75!UBERON:0000349;1.11e-24;5!UBERON:0004733;2.74e-24;12!UBERON:0002028;2.74e-24;12!UBERON:0001016;5.00e-24;83!UBERON:0004732;2.51e-22;13!UBERON:0002298;2.19e-20;6!UBERON:0002680;1.64e-18;9!UBERON:0001895;1.64e-18;9!UBERON:0007023;7.70e-18;114!UBERON:0001871;1.85e-17;6!UBERON:0002021;2.95e-16;5!UBERON:0001872;4.36e-16;5!UBERON:0001870;6.78e-16;3!UBERON:0000988;1.65e-15;3!UBERON:0002702;2.28e-11;2!UBERON:0001954;4.16e-11;2!UBERON:0003022;4.16e-11;2!UBERON:0002421;4.16e-11;2!UBERON:0002600;4.16e-11;2!UBERON:0001876;5.89e-11;2!UBERON:0002771;6.04e-11;2!UBERON:0001897;1.35e-10;2!UBERON:0002148;1.35e-10;2!UBERON:0006331;1.35e-10;2!UBERON:0009662;1.35e-10;2!UBERON:0010225;1.35e-10;2!UBERON:0011216;4.02e-10;132!UBERON:0001896;1.93e-07;3!UBERON:0005290;1.93e-07;3!UBERON:0002037;2.14e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.90e-86,56;UBERON:0005068,2.90e-86,56;UBERON:0006241,2.90e-86,56;UBERON:0007135,2.90e-86,56;UBERON:0000073,6.27e-86,53;UBERON:0002616,6.27e-86,53;UBERON:0002619,1.01e-73,22;UBERON:0000955,1.31e-73,68;UBERON:0006238,1.31e-73,68;UBERON:0001017,1.06e-68,81;UBERON:0000956,1.06e-64,25;UBERON:0000203,1.06e-64,25;UBERON:0001950,1.52e-64,20;UBERON:0003528,2.97e-63,34;UBERON:0002020,2.97e-63,34;UBERON:0002780,6.05e-62,41;UBERON:0001890,6.05e-62,41;UBERON:0003080,6.05e-62,41;UBERON:0006240,6.05e-62,41;UBERON:0001869,2.09e-61,32;UBERON:0001016,2.84e-61,89;UBERON:0001893,1.29e-57,34;UBERON:0003075,4.52e-57,82;UBERON:0007284,4.52e-57,82;UBERON:0002791,1.61e-55,32;UBERON:0002346,3.98e-54,86;UBERON:0007023,5.73e-54,114;UBERON:0010371,1.19e-43,104;UBERON:0003056,3.67e-40,61;UBERON:0010314,2.33e-35,132;UBERON:0000200,2.41e-29,6;UBERON:0004121,5.94e-29,171;UBERON:0000924,5.94e-29,171;UBERON:0006601,5.94e-29,171;UBERON:0011216,4.96e-25,223;UBERON:0000349,1.17e-24,5;UBERON:0004733,2.00e-24,12;UBERON:0002028,2.00e-24,12;UBERON:0007277,2.00e-24,12;UBERON:0003076,3.33e-24,15;UBERON:0003057,3.33e-24,15;UBERON:0004732,1.88e-22,13;UBERON:0000025,1.57e-20,192;UBERON:0002298,1.98e-20,6;UBERON:0002680,1.50e-18,9;UBERON:0001895,1.50e-18,9;UBERON:0010092,1.50e-18,9;UBERON:0001871,2.02e-17,6;UBERON:0002021,2.79e-16,5;UBERON:0004111,3.12e-16,240;UBERON:0001872,3.96e-16,5;UBERON:0001870,6.31e-16,3;UBERON:0000988,2.06e-15,3;UBERON:0002702,2.34e-11,2;UBERON:0000483,3.46e-11,306;UBERON:0001954,4.49e-11,2;UBERON:0003022,4.49e-11,2;UBERON:0002421,4.49e-11,2;UBERON:0002600,4.49e-11,2;UBERON:0000119,5.21e-11,309;UBERON:0001876,5.75e-11,2;UBERON:0002771,6.67e-11,2;UBERON:0001897,1.69e-10,2;UBERON:0002148,1.69e-10,2;UBERON:0006331,1.69e-10,2;UBERON:0009662,1.69e-10,2;UBERON:0010225,1.69e-10,2;UBERON:0001896,1.54e-07,3;UBERON:0005290,1.54e-07,3;UBERON:0010096,1.54e-07,3;UBERON:0002037,1.81e-07,6;UBERON:0006215,1.81e-07,6 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528290604079356,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,7.03347082052564,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0.969332746095218,3.24688343566479,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.60298219312704,1.52581736317083,1.76926815889959,1.77328571372128,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,1.1713222286267,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.588610280447,0,0,0,3.8619585533086,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,7.15706720828373,3.26888174667781,0,0,0,0,0,4.31321852271975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00777164720807,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08854543973589,4.02686674176478,6.76031025815099,0.573409195690071,1.88579387612649,7.32737554708325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45646090379327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,2.376481328569,5.6678630530234,8.14132681191471,2.87162909937057,0,3.66533438060355,3.87541549516443,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,3.51195440015652,3.90539049306924,5.99391709853434,4.18544347279785,0,0,0,0,0,0,0,0,0,3.193285325855,0,0,14.2736439251347,2.17050152757402,0,0,1.56986185701028,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0.385870790539723,0,0,0,0,1.17785080268967,0.594092800654172,0.8453114551668,0,0,0.128915775947154,0,0,0,0,0,0,0,0,2.17572768610927,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.303114792872958,1.07185652062471,4.97501663675268,1.03432995861895,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@PHACTR2 | |||
}} |
Revision as of 14:23, 22 January 2014
Short description: | p5@PHACTR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PHACTR2_5end |
Coexpression cluster: | C247_pons_locus_medulla_spinal_paracentral_medial_occipital |
Association with transcript: | 53bp_to_ENST00000305766_5end |
EntrezGene: | PHACTR2 |
HGNC: | 20956 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data