FFCP PHASE1:Hg19::chr6:111927463..111927482,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10758 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1343 | |||
|TSSclassifier=strong | |||
|UniProt=O43734,Q7Z6Q1 | |||
|association_with_transcript=0bp_to_ENST00000340026,ENST00000392556,NM_001164281,NM_147686,NR_028338,uc003pvf.2,uc003pvg.2,uc010kdw.2,uc010kdx.2,uc011ebc.1_5end | |||
|description=CAGE_peak_7_at_TRAF3IP2_5end | |||
|id=chr6:111927463..111927482,- | |||
|ontology_enrichment_celltype=CL:0000055!1.03e-18!180;CL:0000057!1.90e-18!75;CL:0002620!3.29e-10!23;CL:0002371!1.80e-08!591;CL:0000136!5.49e-08!15;CL:0000144!2.02e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.78e-09;23!CL:0002570;4.79e-09;8!CL:0000136;7.29e-09;13!CL:0000057;3.40e-08;73!CL:0002540;1.84e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.25e-17,76;CL:0000048,1.06e-12,427;CL:0000723,1.70e-12,433;CL:0000034,1.16e-11,441;CL:0002320,1.12e-10,361;CL:0000136,1.25e-10,15;CL:0002620,6.21e-10,23;CL:0002570,1.51e-09,8;CL:0000134,1.09e-08,354;CL:0002540,2.09e-07,6;CL:0000219,5.19e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!4.25e-12!95;UBERON:0002199!9.28e-12!45;UBERON:0002416!9.28e-12!45;UBERON:0002097!1.74e-09!40;UBERON:0001013!3.62e-09!14;UBERON:0000468!5.01e-09!659;UBERON:0000914!1.19e-08!83;UBERON:0002329!1.19e-08!83;UBERON:0003077!1.19e-08!83;UBERON:0003059!1.19e-08!83;UBERON:0007282!1.19e-08!83;UBERON:0009618!1.19e-08!83;UBERON:0007285!1.19e-08!83;UBERON:0000475!2.09e-08!365;UBERON:0004290!9.09e-08!70;UBERON:0000467!3.04e-07!625;UBERON:0000480!4.45e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.54e-14;14!UBERON:0003102;6.76e-08;50!UBERON:0002097;1.75e-07;41!UBERON:0002199;1.99e-07;46!UBERON:0002416;1.99e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.58e-15,14;UBERON:0002199,2.04e-12,46;UBERON:0002416,2.04e-12,46;UBERON:0003102,2.68e-11,99;UBERON:0002384,1.33e-10,371;UBERON:0002097,5.55e-09,41 | |||
|phase1_expression=0.908391896352783,1.49870366723688,1.12763523276777,2.00146596706261,1.78784437770915,1.74467704820074,2.53299878168311,1.89515962028049,1.30592814099919,0.245733936501509,0.697801167972428,0.436882744260345,0.527533956456907,1.98026164736075,1.65698687863958,1.34465029290355,1.20538905604795,0.730310090387373,0.487932798790507,0.984968464614303,0.408001382488506,0.313454721478088,0.286235987131057,0.684372125364421,0.376627918784408,0.0764134057479513,0.0821005894499457,0,0,0,0.154816123316076,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0.581592955118259,0.377875943688809,0,0.697287110717054,0.411167888021826,0.619412741790207,0.28769239232215,0.256160706529101,0.47296445977717,2.41321976515633,0,2.70852973188684,0.188242339542605,0.545812300115692,1.12361742222542,1.22433556948361,1.92557416245656,0,0.329851300186716,0.398927315243264,0.426224750532694,1.16083695451434,1.13477044938228,0.622822248995575,0.251248665256743,1.0429658368404,0.217188844705117,2.42159801053347,1.47311054395026,1.89877432464531,0,0,0,0,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,2.1686349143074,0.50133791063589,1.30361867064741,0.795285947051099,1.45990461090791,1.03988298880475,1.10864698731282,0.43917392846563,0.392937226493138,0.364295288292542,0,0.649094787309367,0.174129737299267,0,0,0,0,0.596287222100115,1.72046919021225,0.347140501607594,0.56530794192401,0,0,1.04497483268405,1.03366703667732,2.84613010149368,0.66944122552934,0,0,0.24406205754817,0.735326160691737,0,0.535798369704479,0.44905874525234,0.450445921933289,1.53316637465883,0,0.549605231791222,0,0,0.436094052142534,0,0,1.19168262731897,1.43418310374407,0.709336764396714,2.24271040056923,2.1349799145941,0.24666754841716,0.311211035399766,0.538842688278752,0.490385709340376,1.96764655938411,2.30470369792,3.04617861383936,0.936480230490962,0.570471821544449,1.49448680551801,1.29177948508141,1.13311061057692,0.842704840213491,1.63323337003915,1.10550885580591,1.44656093646072,0,0.989067717114227,3.64064544775211,0.718618141816238,1.0100166837244,1.00094815897571,1.10825646193673,0.877955241761676,1.5324389789951,1.80285670687916,0.226864366320042,1.79389635688862,1.2813443329114,1.69545520927649,3.30100205692843,1.95799805553034,0.515281080091258,1.48893485065272,1.5189869901714,1.46155507741798,1.51460264546469,1.93304787148829,0.969876340912871,2.13005755509969,2.01504196455281,0.847802961552438,0,0,0,0.121973706129595,0.132529768321485,0,0.414644220061482,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0.928735856063958,1.44375896333917,0.354920400119532,0.674338760312407,0,0.55146986366197,0.435758888184812,0.474541238222193,0.269662616320329,0,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,0.343135620597051,0.439001141634502,1.1240175325762,0.201057944823262,0.462942225792648,5.53874119027552,2.07986957055916,0,0.231860809950154,0.587043471179108,0.288732895522148,0,0,0,0,0,0,0.297262324577456,0,0,0.141775097242386,0.626909658919938,0.871901815541886,0.383382679165211,0,0.44024217006613,1.24396869324463,0.288239906833923,0.37872730027914,0.190493682876507,0.381988425558278,1.17217447210047,0,0.411309970813294,0,0.571652865261156,1.23344192779897,1.30788020649984,0.2933531432838,0.646358578788889,7.15312891703765,2.535908257668,1.59562869950922,0,2.31486636835928,2.83698264046557,1.3321108950805,0.285955987316295,4.88359444852299,2.46972101034231,1.62868092146868,0,1.58390374586686,0.602878754119172,0.871533458600294,0.799783929456456,0,0,2.10833939483032,1.19812427745791,1.14861935834114,0,1.01346914667305,1.02738161275192,0.358121926479791,0,0,0.215627574859517,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,1.96306386750624,1.50051156317903,1.08506009479894,0.623912584592421,1.24900292158013,0.630809660135739,0.702848489956279,0.300946099727719,0,0,0,0.737476674166813,2.78027566297865,0.783204629850962,1.37257369524342,0,0,0.106727557803444,0.303127571446259,0,0,0.744323423456331,1.07423381301644,0.841980283299221,0.512556597022804,0,0.64341568457443,1.48418066444991,1.23367755042124,1.77561725313127,2.54594183642808,0.519254429183621,1.39452454151951,0.241718899183244,0.200506470303285,0.460404944679482,1.14814448164607,1.45672934405374,2.09799063935079,0.902399225814824,0.15403067420883,0,0,0.105551628892876,1.13733384070897,0.680374821106063,0.431831832204279,0,0.270946437543853,0,0,0,0.895499018888713,0,0,1.02580050046556,0.984043937099117,0.976135183992909,0.309123034943167,0.27470839445503,0.41254749960294,1.14853107599234,0.650060246036521,0,1.93341436584244,2.00263202249038,1.07452572308291,0.827019434907183,2.79292636657511,1.88521702088497,1.78975917573812,1.06838442776085,0.165284915360978,0.384380134730212,0.127612712494584,0.30347334256665,0.929691098594572,0.94443704049192,0,0,1.59691809095107,0.869932992075073,0.37064843820784,0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0.202056159043763,0.645499848534087,0,0.162806537221949,0.533636729388577,0,0.898252021065869,0,1.1001729976458,1.22068853494722,0.665756774185513,0.402547587182052,0 | |||
|short_description=p7@TRAF3IP2 | |||
}} |
Revision as of 13:25, 22 January 2014
Short description: | p7@TRAF3IP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TRAF3IP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000340026, ENST00000392556, NM_001164281, NM_147686, NR_028338, uc003pvf.2, uc003pvg.2, uc010kdw.2, uc010kdx.2, uc011ebc.1_5end |
EntrezGene: | TRAF3IP2 |
HGNC: | 1343 |
UniProt: | O43734Q7Z6Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.25e-17 | 76 |
multi fate stem cell | 1.06e-12 | 427 |
somatic stem cell | 1.70e-12 | 433 |
stem cell | 1.16e-11 | 441 |
connective tissue cell | 1.12e-10 | 361 |
fat cell | 1.25e-10 | 15 |
skin fibroblast | 6.21e-10 | 23 |
mesenchymal stem cell of adipose | 1.51e-09 | 8 |
mesenchymal cell | 1.09e-08 | 354 |
mesenchymal stem cell of the bone marrow | 2.09e-07 | 6 |
motile cell | 5.19e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.58e-15 | 14 |
integument | 2.04e-12 | 46 |
integumental system | 2.04e-12 | 46 |
surface structure | 2.68e-11 | 99 |
connective tissue | 1.33e-10 | 371 |
skin of body | 5.55e-09 | 41 |