FFCP PHASE1:Hg19::chr6:68598534..68598555,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_at_chr6:68598534..68598555,- | |||
|id=chr6:68598534..68598555,- | |||
|ontology_enrichment_celltype=CL:0000763!5.12e-21!112;CL:0000049!5.12e-21!112;CL:0002032!1.34e-14!165;CL:0000837!1.34e-14!165;CL:0000037!7.62e-14!172;CL:0000566!7.62e-14!172;CL:0000988!7.26e-13!182 | |||
|ontology_enrichment_celltype_v019=CL:0000763;4.36e-12;100!CL:0000054;2.32e-07;2!CL:0000137;2.32e-07;2!CL:0000092;2.32e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.91e-27,108;CL:0000049,1.91e-27,108;CL:0002032,6.43e-18,161;CL:0000837,6.43e-18,161;CL:0000037,4.19e-17,168;CL:0000988,3.76e-16,177;CL:0000054,2.25e-07,2;CL:0000137,2.25e-07,2;CL:0000092,2.25e-07,2;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000049;1.89e-11;108 | |||
|ontology_enrichment_disease=DOID:8692!3.50e-70!31;DOID:1240!2.29e-61!39;DOID:2531!2.98e-51!51;DOID:0060083!2.98e-51!51;DOID:1036!4.01e-43!8;DOID:0050686!1.49e-22!137;DOID:162!5.36e-14!235;DOID:14566!1.30e-13!239;DOID:0060085!2.69e-08!1;DOID:3165!2.69e-08!1;DOID:0060121!2.69e-08!1;DOID:2438!2.69e-08!1;DOID:4418!2.69e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.30e-86;31!DOID:1036;1.20e-75;8!DOID:1240;2.53e-58;39!DOID:2531;3.90e-37;51!DOID:0060083;3.90e-37;51!DOID:0060085;1.95e-13;1!DOID:3165;1.95e-13;1!DOID:0060121;1.95e-13;1!DOID:2438;1.95e-13;1!DOID:4418;1.95e-13;1!DOID:200;2.32e-07;2!DOID:4305;2.32e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.94e-88,31;DOID:1036,1.13e-75,8;DOID:1240,8.92e-70,39;DOID:2531,2.15e-60,51;DOID:0060083,2.15e-60,51;DOID:0050686,2.49e-21,137;DOID:0060085,1.83e-13,1;DOID:3165,1.83e-13,1;DOID:0060121,1.83e-13,1;DOID:2438,1.83e-13,1;DOID:4418,1.83e-13,1;DOID:162,9.76e-12,235;DOID:14566,1.87e-11,239;DOID:200,2.25e-07,2;DOID:4305,2.25e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001282!3.33e-08!1;UBERON:0009842!3.33e-08!1;UBERON:0003704!3.33e-08!1;UBERON:0001171!3.33e-08!1;UBERON:0001172!3.33e-08!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.92e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0,4.54470716384378,0.280797178113459,1.36940807419915,0,0,0,3.85411380248879,0,0,0,18.4344458585075,17.4467364156084,17.3523107380385,0.390776190804081,2.22724939116194,0,0,0,8.45922030527097,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0,0,0,7.53505230696119,0,15.5661005825855,10.7834393874757,10.0692952185506,14.6110374197623,23.8404868470568,0,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.843458724211,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:68598534..68598555,- | |||
}} |
Revision as of 12:32, 22 January 2014
Short description: | p@chr6:68598534..68598555, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:68598534..68598555, - |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.91e-27 | 108 |
common myeloid progenitor | 1.91e-27 | 108 |
hematopoietic oligopotent progenitor cell | 6.43e-18 | 161 |
hematopoietic multipotent progenitor cell | 6.43e-18 | 161 |
hematopoietic stem cell | 4.19e-17 | 168 |
hematopoietic cell | 3.76e-16 | 177 |
bone matrix secreting cell | 2.25e-07 | 2 |
osteocyte | 2.25e-07 | 2 |
osteoclast | 2.25e-07 | 2 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.92e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.94e-88 | 31 |
chronic leukemia | 1.13e-75 | 8 |
leukemia | 8.92e-70 | 39 |
hematologic cancer | 2.15e-60 | 51 |
immune system cancer | 2.15e-60 | 51 |
organ system cancer | 2.49e-21 | 137 |
organ system benign neoplasm | 1.83e-13 | 1 |
skin benign neoplasm | 1.83e-13 | 1 |
integumentary system benign neoplasm | 1.83e-13 | 1 |
dermis tumor | 1.83e-13 | 1 |
cutaneous fibrous histiocytoma | 1.83e-13 | 1 |
cancer | 9.76e-12 | 235 |
disease of cellular proliferation | 1.87e-11 | 239 |
giant cell tumor | 2.25e-07 | 2 |
bone giant cell tumor | 2.25e-07 | 2 |