FFCP PHASE1:Hg19::chr6:68597008..68597030,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C510 | |||
|description=CAGE_peak_at_chr6:68597008..68597030,- | |||
|id=chr6:68597008..68597030,- | |||
|ontology_enrichment_celltype=CL:0000763!4.81e-20!112;CL:0000049!4.81e-20!112;CL:0000054!1.16e-17!2;CL:0000137!1.16e-17!2;CL:0000092!1.16e-17!2;CL:0002032!3.00e-14!165;CL:0000837!3.00e-14!165;CL:0000037!1.55e-13!172;CL:0000566!1.55e-13!172;CL:0000988!1.31e-12!182;CL:0000062!3.08e-07!11;CL:0000375!3.08e-07!11;CL:0000335!3.08e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000054;6.64e-28;2!CL:0000137;6.64e-28;2!CL:0000092;6.64e-28;2!CL:0000763;5.58e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,7.10e-28,2;CL:0000137,7.10e-28,2;CL:0000092,7.10e-28,2;CL:0000763,2.21e-22,108;CL:0000049,2.21e-22,108;CL:0002032,1.42e-14,161;CL:0000837,1.42e-14,161;CL:0000037,6.61e-14,168;CL:0000988,4.00e-13,177;CL:0000134,8.46e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000049;6.37e-11;108 | |||
|ontology_enrichment_disease=DOID:8692!1.10e-63!31;DOID:1240!1.47e-56!39;DOID:2531!8.05e-54!51;DOID:0060083!8.05e-54!51;DOID:1036!4.83e-49!8;DOID:0050686!6.15e-20!137;DOID:200!1.16e-17!2;DOID:4305!1.16e-17!2;DOID:162!7.39e-13!235;DOID:14566!1.63e-12!239;DOID:0060085!7.98e-10!1;DOID:3165!7.98e-10!1;DOID:0060121!7.98e-10!1;DOID:2438!7.98e-10!1;DOID:4418!7.98e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.72e-60;31!DOID:1036;3.57e-59;8!DOID:1240;1.63e-40;39!DOID:2531;2.39e-31;51!DOID:0060083;2.39e-31;51!DOID:200;6.64e-28;2!DOID:4305;6.64e-28;2!DOID:0060085;4.73e-15;1!DOID:3165;4.73e-15;1!DOID:0060121;4.73e-15;1!DOID:2438;4.73e-15;1!DOID:4418;4.73e-15;1!DOID:201;5.81e-10;6!DOID:0060100;5.81e-10;6!DOID:0050686;8.52e-07;137 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.88e-60,31;DOID:1036,3.95e-59,8;DOID:2531,2.36e-49,51;DOID:0060083,2.36e-49,51;DOID:1240,2.21e-47,39;DOID:200,7.10e-28,2;DOID:4305,7.10e-28,2;DOID:0050686,2.26e-17,137;DOID:0060085,4.73e-15,1;DOID:3165,4.73e-15,1;DOID:0060121,4.73e-15,1;DOID:2438,4.73e-15,1;DOID:4418,4.73e-15,1;DOID:162,4.21e-11,235;DOID:14566,7.75e-11,239;DOID:201,5.94e-10,6;DOID:0060100,5.94e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0001282!2.55e-09!1;UBERON:0009842!2.55e-09!1;UBERON:0003704!2.55e-09!1;UBERON:0001171!2.55e-09!1;UBERON:0001172!2.55e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.75e-14;1!UBERON:0009842;2.75e-14;1!UBERON:0003704;2.75e-14;1!UBERON:0001171;2.75e-14;1!UBERON:0001172;2.75e-14;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,3.15e-14,1;UBERON:0009842,3.15e-14,1;UBERON:0003704,3.15e-14,1;UBERON:0001171,3.15e-14,1;UBERON:0001172,3.15e-14,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,1.29848776109822,0,2.51058146936511,0,0,0,0.321176150207399,0,0,0,2.76516687877612,6.03925491309523,5.00547425135725,0,0.835218521685727,0,0,0,2.81974010175699,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02547850262301,0,0,0,0,0,0,0,0.627921025580099,0,3.60953056987489,4.31337575499027,4.02771808742022,2.27704479269022,1.27149263184303,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.070175782002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38832686744051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05105676373734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:68597008..68597030,- | |||
}} |
Revision as of 12:32, 22 January 2014
Short description: | p@chr6:68597008..68597030, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:68597008..68597030, - |
Coexpression cluster: | C510_fibrous_mesothelioma_cholangiocellular_liposarcoma_Fibroblast_mesenchymal_leukemia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 7.10e-28 | 2 |
osteocyte | 7.10e-28 | 2 |
osteoclast | 7.10e-28 | 2 |
myeloid cell | 2.21e-22 | 108 |
common myeloid progenitor | 2.21e-22 | 108 |
hematopoietic oligopotent progenitor cell | 1.42e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-14 | 161 |
hematopoietic stem cell | 6.61e-14 | 168 |
hematopoietic cell | 4.00e-13 | 177 |
mesenchymal cell | 8.46e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 3.15e-14 | 1 |
acinus | 3.15e-14 | 1 |
intrahepatic bile duct | 3.15e-14 | 1 |
portal lobule | 3.15e-14 | 1 |
hepatic acinus | 3.15e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.88e-60 | 31 |
chronic leukemia | 3.95e-59 | 8 |
hematologic cancer | 2.36e-49 | 51 |
immune system cancer | 2.36e-49 | 51 |
leukemia | 2.21e-47 | 39 |
giant cell tumor | 7.10e-28 | 2 |
bone giant cell tumor | 7.10e-28 | 2 |
organ system cancer | 2.26e-17 | 137 |
organ system benign neoplasm | 4.73e-15 | 1 |
skin benign neoplasm | 4.73e-15 | 1 |
integumentary system benign neoplasm | 4.73e-15 | 1 |
dermis tumor | 4.73e-15 | 1 |
cutaneous fibrous histiocytoma | 4.73e-15 | 1 |
cancer | 4.21e-11 | 235 |
disease of cellular proliferation | 7.75e-11 | 239 |
connective tissue cancer | 5.94e-10 | 6 |
musculoskeletal system cancer | 5.94e-10 | 6 |