FFCP PHASE1:Hg19::chr6:64282122..64282131,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=7803 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9634 | |||
|TSSclassifier=strong | |||
|UniProt=Q93096 | |||
|association_with_transcript=202bp_to_NM_003463,uc003pel.2_5end | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_40_at_PTP4A1_5end | |||
|id=chr6:64282122..64282131,+ | |||
|ontology_enrichment_celltype=CL:0002150!2.83e-16!3;CL:0000861!2.83e-16!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.64e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.34e-45;29!UBERON:0006595;6.92e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.56e-12!106;DOID:0050687!2.85e-09!143;DOID:162!2.27e-07!235;DOID:14566!4.17e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:305;8.21e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.37e-21,106;DOID:0050687,8.57e-16,143;DOID:162,3.37e-09,235;DOID:14566,5.49e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.99e-45!9;UBERON:0001557!2.53e-20!19;UBERON:0008947!2.46e-09!38;UBERON:0003258!2.46e-09!38;UBERON:0001041!5.28e-08!98;UBERON:0000072!1.96e-07!46;UBERON:0000077!4.29e-07!130;UBERON:0004921!4.29e-07!129;UBERON:0004185!4.29e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.75e-146;9!UBERON:0001557;5.75e-146;9!UBERON:0000072;9.86e-33;37!UBERON:0000065;1.33e-27;44!UBERON:0001004;1.84e-14;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.82e-146,9;UBERON:0001557,4.26e-69,19;UBERON:0008947,2.40e-34,38;UBERON:0003258,2.40e-34,38;UBERON:0000072,1.13e-27,47;UBERON:0000065,5.12e-24,54;UBERON:0001004,2.30e-17,74;UBERON:0001041,1.13e-14,87;UBERON:0004921,1.55e-10,118;UBERON:0001007,1.91e-08,145;UBERON:0001555,1.91e-08,145;UBERON:0007026,1.91e-08,145;UBERON:0001048,1.23e-07,160;UBERON:0004119,1.39e-07,160;UBERON:0000925,1.39e-07,160;UBERON:0006595,1.39e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53798840051797,1.34867752062481,1.44606617930089,1.8749975364507,1.08939722046203,1.89816495288877,1.21348177344148,1.37355025587742,1.92373578473195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762569244632931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,2.32215195093804,2.33885814675794,1.23173185579814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0.590969204419841,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p40@PTP4A1 | |||
}} |
Revision as of 12:29, 22 January 2014
Short description: | p40@PTP4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_40_at_PTP4A1_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 202bp_to_NM_003463, uc003pel.2_5end |
EntrezGene: | PTP4A1 |
HGNC: | 9634 |
UniProt: | Q93096 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.64e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.82e-146 | 9 |
upper respiratory tract | 4.26e-69 | 19 |
respiratory primordium | 2.40e-34 | 38 |
endoderm of foregut | 2.40e-34 | 38 |
segment of respiratory tract | 1.13e-27 | 47 |
respiratory tract | 5.12e-24 | 54 |
respiratory system | 2.30e-17 | 74 |
foregut | 1.13e-14 | 87 |
subdivision of digestive tract | 1.55e-10 | 118 |
digestive system | 1.91e-08 | 145 |
digestive tract | 1.91e-08 | 145 |
primitive gut | 1.91e-08 | 145 |
primordium | 1.23e-07 | 160 |
endoderm-derived structure | 1.39e-07 | 160 |
endoderm | 1.39e-07 | 160 |
presumptive endoderm | 1.39e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.37e-21 | 106 |
cell type cancer | 8.57e-16 | 143 |
cancer | 3.37e-09 | 235 |
disease of cellular proliferation | 5.49e-09 | 239 |