FFCP PHASE1:Hg19::chr6:24345366..24345371,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C860 | |||
|description=CAGE_peak_at_chr6:24345366..24345371,- | |||
|id=chr6:24345366..24345371,- | |||
|ontology_enrichment_celltype=CL:1000507!3.60e-40!12;CL:1000494!3.60e-40!12;CL:1000497!2.32e-32!18;CL:0002518!2.32e-32!18;CL:1000449!8.95e-30!16;CL:0002681!2.73e-22!13;CL:0002584!2.73e-22!13;CL:0000239!3.12e-19!3;CL:1000615!3.12e-19!3;CL:0002306!3.12e-19!3;CL:0000650!5.29e-09!3;CL:1000618!5.29e-09!3;CL:1001318!5.29e-09!3;CL:0002173!5.29e-09!3;CL:1000500!5.29e-09!3;CL:0000181!3.21e-08!12;CL:0000417!3.21e-08!12;CL:0000668!3.21e-08!12;CL:0000414!3.21e-08!12;CL:0000412!3.21e-08!12;CL:0000182!3.21e-08!12;CL:0000313!7.03e-08!1;CL:0000066!3.24e-07!254;CL:0002563!6.65e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.34e-23;1!CL:0000159;1.65e-12;2!CL:1000507;8.64e-10;10!CL:1000494;8.64e-10;10!CL:0000239;1.35e-08;3!CL:1000615;1.35e-08;3!CL:0002306;1.35e-08;3!CL:1000449;7.98e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.34e-23,1;CL:0000159,1.65e-12,2;CL:1000507,9.24e-10,10;CL:1000494,9.24e-10,10;CL:0000239,1.51e-08,3;CL:1000615,1.51e-08,3;CL:0002306,1.51e-08,3;CL:1000449,8.33e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.19e-12;2!UBERON:0003918;1.05e-09;10!UBERON:0007687;1.05e-09;10 | |||
|ontology_enrichment_disease=DOID:2152!7.03e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.34e-23;1!DOID:299;1.30e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.34e-23,1;DOID:299,1.24e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0009773!3.60e-40!12;UBERON:0001231!3.60e-40!12;UBERON:0004810!3.60e-40!12;UBERON:0005172!3.51e-36!55;UBERON:0005173!3.51e-36!55;UBERON:0002113!3.79e-36!27;UBERON:0003918!3.79e-36!27;UBERON:0005095!3.79e-36!27;UBERON:0007687!3.79e-36!27;UBERON:0006555!1.16e-34!17;UBERON:0005103!1.16e-34!17;UBERON:0000083!1.16e-34!17;UBERON:0009201!1.16e-34!17;UBERON:0004819!1.16e-34!17;UBERON:0006553!1.16e-34!17;UBERON:0003074!1.16e-34!17;UBERON:0003060!1.16e-34!17;UBERON:0000080!1.22e-32!18;UBERON:0002120!1.22e-32!18;UBERON:0004875!1.22e-32!18;UBERON:0005721!1.22e-32!18;UBERON:0005754!1.22e-32!18;UBERON:0007297!1.22e-32!18;UBERON:0002417!3.11e-32!61;UBERON:0000916!3.11e-32!61;UBERON:0000489!4.27e-30!32;UBERON:0004211!8.95e-30!16;UBERON:0001285!8.95e-30!16;UBERON:0007684!8.95e-30!16;UBERON:0003220!8.95e-30!16;UBERON:0004208!8.95e-30!16;UBERON:0004876!3.35e-29!20;UBERON:0003887!9.97e-28!21;UBERON:0001225!2.73e-22!13;UBERON:0008987!2.73e-22!13;UBERON:0000058!4.67e-22!26;UBERON:0006554!3.52e-21!44;UBERON:0005177!7.08e-21!107;UBERON:0001008!1.19e-20!45;UBERON:0006853!3.12e-19!3;UBERON:0007685!3.12e-19!3;UBERON:0004134!3.12e-19!3;UBERON:0001851!5.89e-18!16;UBERON:0009569!1.72e-17!113;UBERON:0000353!7.51e-17!17;UBERON:0003064!5.67e-15!37;UBERON:0000466!1.40e-13!126;UBERON:0003103!1.44e-12!69;UBERON:0003886!7.26e-12!63;UBERON:0002107!7.36e-11!19;UBERON:0006925!7.36e-11!19;UBERON:0008836!7.36e-11!19;UBERON:0002553!1.90e-10!70;UBERON:0003914!6.16e-10!118;UBERON:0008835!2.63e-09!22;UBERON:0003894!2.63e-09!22;UBERON:0003567!5.29e-09!3;UBERON:0003838!5.29e-09!3;UBERON:0005169!5.29e-09!3;UBERON:0002321!5.29e-09!3;UBERON:0005215!5.29e-09!3;UBERON:0002303!5.29e-09!3;UBERON:0002319!5.29e-09!3;UBERON:0009854!7.05e-09!23;UBERON:0002100!3.67e-08!216;UBERON:0007499!4.00e-08!25;UBERON:0009497!4.00e-08!25;UBERON:0000015!4.00e-08!25;UBERON:0002423!4.00e-08!25;UBERON:0006235!4.00e-08!25;UBERON:0004161!4.00e-08!25;UBERON:0003104!6.18e-08!238;UBERON:0009142!6.18e-08!238;UBERON:0004911!7.03e-08!1;UBERON:0001301!8.54e-08!1;UBERON:0005057!8.62e-08!26;UBERON:0009856!8.62e-08!26;UBERON:0005256!1.21e-07!143;UBERON:0000464!1.67e-07!104;UBERON:0001242!6.65e-07!4;UBERON:0001262!6.65e-07!4;UBERON:0004786!6.65e-07!4;UBERON:0004808!6.65e-07!4;UBERON:0001277!6.65e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.34e-23;1!UBERON:0001301;2.34e-23;1!UBERON:0002113;5.21e-15;24!UBERON:0011143;5.21e-15;24!UBERON:0004909;1.65e-12;2!UBERON:0000489;1.69e-12;29!UBERON:0006554;4.27e-12;30!UBERON:0001008;4.27e-12;30!UBERON:0004211;8.64e-10;10!UBERON:0009773;8.64e-10;10!UBERON:0001231;8.64e-10;10!UBERON:0004810;8.64e-10;10!UBERON:0006947;1.08e-08;3!UBERON:0004054;1.08e-08;3!UBERON:0006853;1.35e-08;3!UBERON:0007685;1.35e-08;3!UBERON:0004134;1.35e-08;3!UBERON:0005904;7.91e-07;4!UBERON:0006555;7.98e-07;15!UBERON:0004819;7.98e-07;15!UBERON:0001285;7.98e-07;15!UBERON:0007684;7.98e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.34e-23,1;UBERON:0001301,2.62e-23,1;UBERON:0002113,3.31e-21,26;UBERON:0003918,3.31e-21,26;UBERON:0011143,3.31e-21,26;UBERON:0005095,3.31e-21,26;UBERON:0007687,3.31e-21,26;UBERON:0000489,7.81e-18,31;UBERON:0006555,4.88e-13,16;UBERON:0004819,4.88e-13,16;UBERON:0004909,1.65e-12,2;UBERON:0006554,7.68e-12,47;UBERON:0001008,1.34e-11,48;UBERON:0005172,2.50e-10,54;UBERON:0005173,2.50e-10,54;UBERON:0004810,9.24e-10,10;UBERON:0002417,2.61e-09,60;UBERON:0000916,2.61e-09,60;UBERON:0006947,1.12e-08,3;UBERON:0004054,1.12e-08,3;UBERON:0006853,1.51e-08,3;UBERON:0007685,1.51e-08,3;UBERON:0004134,1.51e-08,3;UBERON:0003103,3.14e-08,68;UBERON:0005904,8.14e-07,4;UBERON:0004211,8.33e-07,15;UBERON:0009773,8.33e-07,15;UBERON:0001231,8.33e-07,15;UBERON:0001285,8.33e-07,15;UBERON:0007684,8.33e-07,15;UBERON:0004208,8.33e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.847168708148562,0.784349769176855,0,4.43316841350078,0,0,0,0,0.270946437543853,0.501689773854853,1.01950509218015,0.831076008928724,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43282702530686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70765727617876,0,0,0,0,2.27144668714639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.329663433524666,0.202210631562555,0.984274815147488,0,0,0,0,0,0,0,0,0,0,1.26089131678717,1.25891011523995,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.14979644611072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,5.36906072629403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:24345366..24345371,- | |||
}} |
Revision as of 10:27, 22 January 2014
Short description: | p@chr6:24345366..24345371, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:24345366..24345371, - |
Coexpression cluster: | C860_serous_mesothelioma_Renal_clear_colon_endometrial_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.34e-23 | 1 |
seromucus secreting cell | 1.65e-12 | 2 |
kidney tubule cell | 9.24e-10 | 10 |
nephron tubule epithelial cell | 9.24e-10 | 10 |
brush border epithelial cell | 1.51e-08 | 3 |
kidney cortex tubule cell | 1.51e-08 | 3 |
epithelial cell of proximal tubule | 1.51e-08 | 3 |
epithelial cell of nephron | 8.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.34e-23 | 1 |
epididymis | 2.62e-23 | 1 |
kidney | 3.31e-21 | 26 |
kidney mesenchyme | 3.31e-21 | 26 |
upper urinary tract | 3.31e-21 | 26 |
kidney rudiment | 3.31e-21 | 26 |
kidney field | 3.31e-21 | 26 |
cavitated compound organ | 7.81e-18 | 31 |
excretory tube | 4.88e-13 | 16 |
kidney epithelium | 4.88e-13 | 16 |
epithelium of gonad | 1.65e-12 | 2 |
urinary system structure | 7.68e-12 | 47 |
renal system | 1.34e-11 | 48 |
abdomen element | 2.50e-10 | 54 |
abdominal segment element | 2.50e-10 | 54 |
nephron tubule epithelium | 9.24e-10 | 10 |
abdominal segment of trunk | 2.61e-09 | 60 |
abdomen | 2.61e-09 | 60 |
male genital duct | 1.12e-08 | 3 |
internal male genitalia | 1.12e-08 | 3 |
renal cortex tubule | 1.51e-08 | 3 |
region of nephron tubule | 1.51e-08 | 3 |
proximal tubule | 1.51e-08 | 3 |
compound organ | 3.14e-08 | 68 |
duct of male reproductive system | 8.14e-07 | 4 |
nephron epithelium | 8.33e-07 | 15 |
renal tubule | 8.33e-07 | 15 |
nephron tubule | 8.33e-07 | 15 |
nephron | 8.33e-07 | 15 |
uriniferous tubule | 8.33e-07 | 15 |
nephrogenic mesenchyme | 8.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.34e-23 | 1 |
adenocarcinoma | 1.24e-08 | 25 |