FFCP PHASE1:Hg19::chr5:102143863..102143874,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5066 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8596 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=96bp_to_ENST00000509523_5end | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_23_at_PAM_5end | |||
|id=chr5:102143863..102143874,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;3.12e-21;1!CL:0000167;5.71e-21;1!CL:0000164;5.71e-21;1!CL:0000502;5.71e-21;1!CL:0000172;5.71e-21;1!CL:0000173;5.71e-21;1!CL:0002535;2.12e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.45e-21,1;CL:0000167,5.16e-21,1;CL:0000164,5.16e-21,1;CL:0000502,5.16e-21,1;CL:0000172,5.16e-21,1;CL:0000173,5.16e-21,1;CL:0002351,5.16e-21,1;CL:0002535,2.23e-11,2 | |||
|ontology_enrichment_development_v019=CL:0002351;5.71e-21;1 | |||
|ontology_enrichment_disease=DOID:3119!5.59e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:4430;5.71e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,5.16e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.83e-31!57;UBERON:0005068!7.83e-31!57;UBERON:0006241!7.83e-31!57;UBERON:0007135!7.83e-31!57;UBERON:0002020!1.31e-28!34;UBERON:0003528!1.31e-28!34;UBERON:0001869!2.51e-27!32;UBERON:0002616!3.80e-27!59;UBERON:0002780!4.93e-26!41;UBERON:0001890!4.93e-26!41;UBERON:0006240!4.93e-26!41;UBERON:0001893!1.70e-25!34;UBERON:0003080!2.65e-25!42;UBERON:0005743!4.13e-25!86;UBERON:0001017!9.74e-25!82;UBERON:0000073!6.35e-24!94;UBERON:0001016!6.35e-24!94;UBERON:0002791!2.29e-23!33;UBERON:0002346!3.57e-22!90;UBERON:0000955!6.56e-22!69;UBERON:0006238!6.56e-22!69;UBERON:0003075!9.87e-22!86;UBERON:0007284!9.87e-22!86;UBERON:0000956!2.70e-21!25;UBERON:0000203!2.70e-21!25;UBERON:0002619!5.02e-21!22;UBERON:0001950!6.07e-20!20;UBERON:0003056!1.01e-17!61;UBERON:0001871!1.74e-14!7;UBERON:0007023!3.02e-14!115;UBERON:0000924!1.65e-11!173;UBERON:0006601!1.65e-11!173;UBERON:0004121!5.04e-11!169;UBERON:0000153!6.13e-11!129;UBERON:0007811!6.13e-11!129;UBERON:0000033!1.03e-10!123;UBERON:0000988!7.52e-10!3;UBERON:0002298!1.59e-09!8;UBERON:0000064!3.96e-09!219;UBERON:0000200!9.38e-09!6;UBERON:0002308!1.01e-08!9;UBERON:0000125!1.01e-08!9;UBERON:0000007!3.72e-08!2;UBERON:0000369!8.55e-08!4;UBERON:0002435!8.55e-08!4;UBERON:0000204!8.55e-08!4;UBERON:0010082!8.55e-08!4;UBERON:0002148!2.16e-07!2;UBERON:0009662!2.16e-07!2;UBERON:0000025!2.23e-07!194;UBERON:0003076!7.28e-07!15;UBERON:0003057!7.28e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.49e-40;2!UBERON:0003296;1.28e-20;4!UBERON:0010133;1.28e-20;4!UBERON:0001894;3.15e-12;7!UBERON:0006955;2.12e-11;2!UBERON:0004801;2.12e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.49e-40,2;UBERON:0003296,1.28e-20,4;UBERON:0010133,1.28e-20,4;UBERON:0001894,3.15e-12,7;UBERON:0006222,3.15e-12,7;UBERON:0006955,2.23e-11,2;UBERON:0004801,2.23e-11,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,12.3447046448595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0.241192877250816,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,2.4441205797345,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0.114536596165916,6.52060991875465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.850493793212345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970423302570136,0,0,0,0,0,0,0,0,6.40456598628376,0,0,0.578063025868136,0,0,0.41023272848151,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.126831620387814,0,0,0,0.175871244359621,0,0,0,2.42786241694653,2.73194629621557,0,0,0,0.0679697329768317,0.328863867814245,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0,0,0,12.6808788596006,0.0771741581079447,0,20.693961039907,0,2.59244201811789,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679914901909147,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p23@PAM | |||
}} |
Revision as of 06:43, 22 January 2014
Short description: | p23@PAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_PAM_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 96bp_to_ENST00000509523_5end |
EntrezGene: | PAM |
HGNC: | 8596 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.45e-21 | 1 |
peptide hormone secreting cell | 5.16e-21 | 1 |
enteroendocrine cell | 5.16e-21 | 1 |
type D enteroendocrine cell | 5.16e-21 | 1 |
somatostatin secreting cell | 5.16e-21 | 1 |
pancreatic D cell | 5.16e-21 | 1 |
progenitor cell of endocrine pancreas | 5.16e-21 | 1 |
epithelial cell of cervix | 2.23e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.49e-40 | 2 |
gland of diencephalon | 1.28e-20 | 4 |
neuroendocrine gland | 1.28e-20 | 4 |
diencephalon | 3.15e-12 | 7 |
future diencephalon | 3.15e-12 | 7 |
uterine epithelium | 2.23e-11 | 2 |
cervix epithelium | 2.23e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.16e-21 | 1 |