FFCP PHASE1:Hg19::chr5:78365409..78365431,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29958 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24475 | |||
|TSSclassifier=strong | |||
|UniProt=F5H1C7 | |||
|association_with_transcript=17bp_to_ENST00000539598,uc011ctf.1,uc011ctg.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_DMGDH_5end | |||
|id=chr5:78365409..78365431,- | |||
|ontology_enrichment_celltype=CL:0000136!1.09e-09!15;CL:0002334!3.22e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.21e-15;13!CL:0000182;1.55e-11;12!CL:0002616;1.91e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.67e-13,15;CL:0000182,1.42e-11,12;CL:0002616,1.62e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.28e-09;31!UBERON:0003918;4.22e-08;10!UBERON:0007687;4.22e-08;10!UBERON:0004161;1.83e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;1.91e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.48e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.70e-14!115;UBERON:0001049!2.25e-07!57;UBERON:0005068!2.25e-07!57;UBERON:0006241!2.25e-07!57;UBERON:0007135!2.25e-07!57;UBERON:0002368!7.11e-07!35;UBERON:0002616!8.26e-07!59;UBERON:0002417!8.62e-07!61;UBERON:0000916!8.62e-07!61;UBERON:0000475!9.75e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.03e-15;19!UBERON:0006925;1.03e-15;19!UBERON:0002368;1.48e-13;33!UBERON:0002423;7.85e-12;25!UBERON:0001301;8.90e-10;1!UBERON:0002365;1.70e-09;31!UBERON:0002330;1.70e-09;31!UBERON:0000949;2.51e-09;43!UBERON:0003296;4.78e-09;4!UBERON:0010133;4.78e-09;4!UBERON:0004457;9.88e-09;9!UBERON:0000042;9.88e-09;9!UBERON:0005172;1.48e-08;52!UBERON:0005173;1.48e-08;52!UBERON:0002417;2.23e-07;58!UBERON:0000916;2.23e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002417,4.32e-18,60;UBERON:0000916,4.32e-18,60;UBERON:0002107,9.53e-16,19;UBERON:0006925,9.53e-16,19;UBERON:0008836,9.53e-16,19;UBERON:0002368,2.50e-14,35;UBERON:0005172,3.94e-14,54;UBERON:0005173,3.94e-14,54;UBERON:0008835,1.54e-13,22;UBERON:0003894,1.54e-13,22;UBERON:0009854,6.27e-13,23;UBERON:0007499,7.41e-12,25;UBERON:0009497,7.41e-12,25;UBERON:0000015,7.41e-12,25;UBERON:0002423,7.41e-12,25;UBERON:0006235,7.41e-12,25;UBERON:0004161,7.41e-12,25;UBERON:0009856,2.21e-11,26;UBERON:0000949,6.50e-11,45;UBERON:0001301,9.70e-10,1;UBERON:0002365,1.82e-09,31;UBERON:0002330,1.82e-09,31;UBERON:0003296,5.63e-09,4;UBERON:0010133,5.63e-09,4;UBERON:0009569,9.55e-09,112;UBERON:0002530,4.49e-08,59;UBERON:0005177,8.03e-07,101 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.986680828671798,1.0007329835313,0,1.74467704820074,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.289693037921647,0,0,0,0,0,3.73290365168481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0.741800787835671,0,0,0.336672227908132,0,0,0,0.30648779579902,0.300476117813194,0,0,0,0,0.600182192168805,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2808055714929,4.91413608338813,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0.664225598535437,0,0.60818530127658,0,0,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0,0.256278298511402,1.02341449813341,0.160853921143607,0,0.308419387605311,0.355123450626254,0.328508624055237,0.519254429183621,0.116210378459959,0,0,0,0.229628896329213,0,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,10.5101831880677,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0,0.322260734604821,0.290033387828457,0.170453254832202,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,2.32218398827431,0.987884678879706,0,0.349934720244983,0,0,0,10.3558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.503865495708552,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.658156191461918,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.789168805698781,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,3.31980669659857,0,0,0,0,0,0,0,0.137041924646751,0,0.126621591911757,0,0,0,0,0,0,3.60349495510126,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0.687481272035051,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0.787831823072237,0.412079291905832,0.26961417541674,0.492137407573744,0,0.795229689809303,0,0,0,0,0,0,0,0,8.03818214451821,1.94081976099493,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0.453248366080503,9.08623848804111,6.62534444561107,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,3.26410682021684,2.506898940227,1.53172788381731,0.983617892129413,0,0,0.122026264901963,0,0,0.443716206147409,0.124192805882767,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0.378806010550178,0.251567901752575,0,0.457680136793847,0,0,0.147855149989634,0.477890301491107,0,0,0.414706207840855,0.265841714557995,0,0,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0.343395705182793,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.202612753855184,0,0,0.126831620387814,0,0,0,0,0,0,1.00885116665647,1.21393120847326,0.455324382702595,0,0,1.8863681038116,0.203909198930495,0,0,0,0.235479278551542,0.157115589916002,0,0,3.88669664193519,0,0.571812353413251,0,0,0,0,0,0,0,0,0.828324005113957,0.511280428554946,0.846774100381858,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0.45178432815584,0,0.301925687133347,0.0771741581079447,0,0,0.245148321753905,0,0.392616934229891,0,0,0.509781344063451,0,0.0644578879735772,0,0,0,0,0,0,0.573358332605805,0,0.271965960763659,0,0,0.371995018166751,0,0.865253124247578,0,0,0,0.101988829741982,0,0,0.250707539292375,0.227336094654718,0,0,0,0.426467963801962,0.476128862927481,0,0.0620747142958579,0,0.190941474834495,0.606351566874658,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.488965776731466,0,0,0.603821380773079,0 | |||
|short_description=p4@DMGDH | |||
}} |
Revision as of 06:08, 22 January 2014
Short description: | p4@DMGDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DMGDH_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 17bp_to_ENST00000539598, uc011ctf.1, uc011ctg.1_5end |
EntrezGene: | DMGDH |
HGNC: | 24475 |
UniProt: | F5H1C7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.67e-13 | 15 |
hepatocyte | 1.42e-11 | 12 |
perirenal adipocyte cell | 1.62e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
abdominal segment of trunk | 4.32e-18 | 60 |
abdomen | 4.32e-18 | 60 |
liver | 9.53e-16 | 19 |
digestive gland | 9.53e-16 | 19 |
liver bud | 9.53e-16 | 19 |
endocrine gland | 2.50e-14 | 35 |
abdomen element | 3.94e-14 | 54 |
abdominal segment element | 3.94e-14 | 54 |
hepatic diverticulum | 1.54e-13 | 22 |
liver primordium | 1.54e-13 | 22 |
digestive tract diverticulum | 6.27e-13 | 23 |
epithelial sac | 7.41e-12 | 25 |
epithelium of foregut-midgut junction | 7.41e-12 | 25 |
anatomical boundary | 7.41e-12 | 25 |
hepatobiliary system | 7.41e-12 | 25 |
foregut-midgut junction | 7.41e-12 | 25 |
septum transversum | 7.41e-12 | 25 |
sac | 2.21e-11 | 26 |
endocrine system | 6.50e-11 | 45 |
epididymis | 9.70e-10 | 1 |
exocrine gland | 1.82e-09 | 31 |
exocrine system | 1.82e-09 | 31 |
gland of diencephalon | 5.63e-09 | 4 |
neuroendocrine gland | 5.63e-09 | 4 |
subdivision of trunk | 9.55e-09 | 112 |
gland | 4.49e-08 | 59 |
trunk region element | 8.03e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.48e-09 | 1 |