FFCP PHASE1:Hg19::chr4:120549931..120549938,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8654 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8784 | |||
|TSSclassifier=strong | |||
|UniProt=O76074 | |||
|association_with_transcript=42bp_to_NM_001083,uc003idh.2_5end | |||
|coexpression_cluster_id=C1933 | |||
|description=CAGE_peak_21_at_PDE5A_5end | |||
|id=chr4:120549931..120549938,- | |||
|ontology_enrichment_celltype=CL:0002622!2.17e-07!3;CL:0002504!7.00e-07!3;CL:1000279!7.00e-07!3;CL:1000280!7.00e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002622;2.18e-38;3!CL:0000222;2.05e-29;1!CL:1000487;1.91e-15;2!CL:0002504;9.43e-11;3!CL:1000279;9.43e-11;3!CL:1000280;9.43e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.80e-38,3;CL:1000487,1.78e-15,2;CL:0002504,9.90e-11,3;CL:1000279,9.90e-11,3;CL:1000280,9.90e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000162!3.92e-17!14;UBERON:0001353!3.92e-17!14;UBERON:0000163!3.92e-17!14;UBERON:0006866!3.92e-17!14;UBERON:0000164!3.92e-17!14;UBERON:0000931!3.92e-17!14;UBERON:0004122!8.88e-16!15;UBERON:0002367!8.91e-16!11;UBERON:0010147!8.91e-16!11;UBERON:0009846!8.91e-16!11;UBERON:0003353!8.91e-16!11;UBERON:0004902!8.91e-16!11;UBERON:0003820!8.91e-16!11;UBERON:0009847!8.91e-16!11;UBERON:0003937!2.95e-14!12;UBERON:0005399!2.95e-14!12;UBERON:0001007!3.60e-14!155;UBERON:0001555!3.60e-14!155;UBERON:0007026!3.60e-14!155;UBERON:0004119!1.76e-13!169;UBERON:0000925!1.76e-13!169;UBERON:0006595!1.76e-13!169;UBERON:0001046!8.43e-12!19;UBERON:0004921!9.83e-12!129;UBERON:0004185!9.83e-12!129;UBERON:0000077!8.28e-11!130;UBERON:0005153!1.86e-09!37;UBERON:0000161!1.38e-08!35;UBERON:0005911!3.11e-08!82;UBERON:0005157!1.42e-07!51;UBERON:0003929!2.75e-07!54;UBERON:0000060!6.79e-07!12;UBERON:0000062!6.85e-07!511;UBERON:0002100!7.78e-07!216;UBERON:0003101!9.99e-07!22;UBERON:0000079!9.99e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;9.38e-24;11!UBERON:0010147;9.38e-24;11!UBERON:0003937;7.56e-22;12!UBERON:0005399;7.56e-22;12!UBERON:0003101;2.80e-12;22!UBERON:0000079;2.80e-12;22!UBERON:0000077;3.87e-10;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,8.35e-24,11;UBERON:0010147,8.35e-24,11;UBERON:0009846,8.35e-24,11;UBERON:0003353,8.35e-24,11;UBERON:0004902,8.35e-24,11;UBERON:0003820,8.35e-24,11;UBERON:0009847,8.35e-24,11;UBERON:0003937,6.79e-22,12;UBERON:0005399,6.79e-22,12;UBERON:0000162,6.89e-19,14;UBERON:0001353,6.89e-19,14;UBERON:0000163,6.89e-19,14;UBERON:0006866,6.89e-19,14;UBERON:0000164,6.89e-19,14;UBERON:0000931,6.89e-19,14;UBERON:0004122,1.10e-17,15;UBERON:0001046,3.96e-14,19;UBERON:0003101,2.64e-12,22;UBERON:0000079,2.64e-12,22;UBERON:0003064,8.05e-10,28;UBERON:0000077,1.66e-09,29;UBERON:0000161,8.74e-08,36;UBERON:0005153,1.36e-07,37 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0,0,0,0,0,0.168336113954066,0,0.277064115484183,1.75591048352335,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.57191197463259,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,1.26295892981067,0.546273504020151,1.96686622439136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,1.37268514868027,0.589062011728432,0,0,0,0,0,0,0.409499734223957,1.41405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0.697118721393016,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0.39961921916426,0,0,0,0,0,0,0,0,2.54995544090804,0,0,0.136905378891993,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,1.26184898228651,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.118193840883968,0.222462803784138,0.078493092850514,0,0,0,0,0,0,0,0.929931402945002,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.365753774946808,0,0.205325613712494,0,0,0.701818390386317,0,0,0.5647304101948,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0.240724100067505,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0.342233301085281,0,0.0717222053926763,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p21@PDE5A | |||
}} |
Revision as of 02:57, 22 January 2014
Short description: | p21@PDE5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_PDE5A_5end |
Coexpression cluster: | C1933_glioblastoma_small_Prostate_Smooth_rhabdomyosarcoma_normal_sacrococcigeal |
Association with transcript: | 42bp_to_NM_001083, uc003idh.2_5end |
EntrezGene: | PDE5A |
HGNC: | 8784 |
UniProt: | O76074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.80e-38 | 3 |
smooth muscle cell of prostate | 1.78e-15 | 2 |
enteric smooth muscle cell | 9.90e-11 | 3 |
smooth muscle cell of large intestine | 9.90e-11 | 3 |
smooth muscle cell of colon | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 8.35e-24 | 11 |
male accessory sex gland | 8.35e-24 | 11 |
embryonic cloacal epithelium | 8.35e-24 | 11 |
epithelium of hindgut | 8.35e-24 | 11 |
urogenital sinus epithelium | 8.35e-24 | 11 |
prostate bud | 8.35e-24 | 11 |
prostate field | 8.35e-24 | 11 |
sex gland | 6.79e-22 | 12 |
male reproductive gland | 6.79e-22 | 12 |
cloaca | 6.89e-19 | 14 |
anal region | 6.89e-19 | 14 |
embryonic cloaca | 6.89e-19 | 14 |
terminal part of digestive tract | 6.89e-19 | 14 |
primitive urogenital sinus | 6.89e-19 | 14 |
proctodeum | 6.89e-19 | 14 |
genitourinary system | 1.10e-17 | 15 |
hindgut | 3.96e-14 | 19 |
male organism | 2.64e-12 | 22 |
male reproductive system | 2.64e-12 | 22 |
intermediate mesoderm | 8.05e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 1.66e-09 | 29 |
orifice | 8.74e-08 | 36 |
epithelial bud | 1.36e-07 | 37 |