FFCP PHASE1:Hg19::chr4:89514497..89514512,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8916 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4876 | |||
|TSSclassifier=strong | |||
|UniProt=C9J8E7 | |||
|association_with_transcript=-16bp_to_ENST00000452979_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_5_at_HERC3_5end | |||
|id=chr4:89514497..89514512,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002166;2.90e-18;3!CL:0002623;5.81e-17;3!CL:0000240;2.00e-15;6!CL:0000311;2.00e-15;6!CL:0000079;2.00e-15;6!CL:0000237;2.00e-15;6!CL:0000154;9.37e-15;6!CL:0002159;2.57e-14;14!CL:0002327;4.09e-13;4!CL:0000312;8.55e-11;5!CL:0000622;2.16e-10;5!CL:0002076;5.52e-10;42!CL:0002251;2.19e-09;20!CL:0002541;8.07e-09;3!CL:0002231;3.24e-08;3!CL:0002621;3.24e-08;3!CL:0000349;1.70e-07;19!CL:0002336;4.01e-07;1!CL:0002261;4.01e-07;1!CL:0002170;4.01e-07;1!CL:0000511;8.97e-07;1!CL:0002625;8.97e-07;1!CL:0000216;8.97e-07;1!CL:0000319;8.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,2.59e-18,3;CL:0002623,1.01e-16,3;CL:0000240,2.16e-15,6;CL:0000311,2.16e-15,6;CL:0000079,2.16e-15,6;CL:0000237,2.16e-15,6;CL:0000036,2.16e-15,6;CL:0000357,2.16e-15,6;CL:0000114,2.16e-15,6;CL:0000154,1.01e-14,6;CL:0002159,2.70e-14,14;CL:0002327,5.06e-13,4;CL:0002076,4.03e-11,42;CL:0000312,9.79e-11,5;CL:0000622,2.99e-10,5;CL:0000066,1.98e-09,253;CL:0002251,2.53e-09,20;CL:0000223,3.15e-09,58;CL:0002541,7.79e-09,3;CL:0002621,3.37e-08,3;CL:0002231,4.52e-08,3;CL:0000349,1.75e-07,19;CL:0002077,1.95e-07,34;CL:0002336,3.57e-07,1;CL:0002261,3.57e-07,1;CL:0002170,3.57e-07,1;CL:0000511,5.69e-07,1;CL:0002625,5.69e-07,1;CL:0000216,5.69e-07,1;CL:0000319,6.38e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000357;2.00e-15;6!CL:0000114;2.00e-15;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;8.97e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,6.38e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;7.87e-14;4!UBERON:0008895;7.87e-14;4!UBERON:0001911;4.09e-13;4!UBERON:0011159;3.68e-11;5!UBERON:0005631;1.01e-09;10!UBERON:0000158;1.01e-09;10!UBERON:0003124;8.07e-09;3!UBERON:0000920;8.07e-09;3!UBERON:0001044;9.69e-09;6!UBERON:0003293;9.69e-09;6!UBERON:0003294;9.69e-09;6!UBERON:0010047;9.69e-09;6!UBERON:0003408;9.69e-09;6!UBERON:0000167;9.69e-09;6!UBERON:0001949;3.24e-08;3!UBERON:0002365;1.06e-07;31!UBERON:0002330;1.06e-07;31!UBERON:0000161;5.50e-07;19!UBERON:0000166;5.50e-07;19!UBERON:0001136;8.97e-07;1!UBERON:0001343;8.97e-07;1!UBERON:0004910;8.97e-07;1!UBERON:0004813;8.97e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,7.24e-14,4;UBERON:0008895,7.24e-14,4;UBERON:0001911,5.06e-13,4;UBERON:0005333,5.06e-13,4;UBERON:0008425,5.06e-13,4;UBERON:0005311,5.06e-13,4;UBERON:0011159,3.44e-11,5;UBERON:0005631,2.92e-10,14;UBERON:0000158,2.92e-10,14;UBERON:0010188,2.13e-09,6;UBERON:0002539,2.13e-09,6;UBERON:0008816,2.13e-09,6;UBERON:0000920,7.79e-09,3;UBERON:0001044,1.27e-08,6;UBERON:0003293,1.27e-08,6;UBERON:0003294,1.27e-08,6;UBERON:0010047,1.27e-08,6;UBERON:0000167,1.27e-08,6;UBERON:0000033,3.32e-08,56;UBERON:0001949,3.37e-08,3;UBERON:0003102,4.11e-08,99;UBERON:0003124,6.57e-08,7;UBERON:0002365,9.83e-08,31;UBERON:0002330,9.83e-08,31;UBERON:0000153,3.04e-07,62;UBERON:0007811,3.04e-07,62;UBERON:0004871,3.61e-07,8;UBERON:0001136,5.69e-07,1;UBERON:0001343,5.69e-07,1;UBERON:0004910,5.69e-07,1;UBERON:0005154,5.69e-07,1;UBERON:0005295,5.69e-07,1;UBERON:0004813,5.69e-07,1;UBERON:0005297,5.69e-07,1;UBERON:0005294,5.69e-07,1;UBERON:0010141,5.69e-07,1;UBERON:0005891,5.69e-07,1;UBERON:0000076,9.64e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,1.14940825229924,0.314843125254717,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.822405995998037,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0,0,0.144846518960824,0.795285947051099,2.43317435151318,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0,0.309157587715317,0.772921620136887,0,0.168776332241266,0.389748020644795,0,0.0920498986422993,0,0,0.10075209822764,0,1.15956511897978,0,1.43402297694502,0,0,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.55146986366197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,1.31700342490351,2.24803506515239,2.51322431029077,2.77765335475589,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,3.74935335947108,3.19166043577833,2.97727704209012,2.23896306757121,1.45316969256981,1.15014803749563,0,0,0.207328115540772,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,1.21251028578504,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,1.01289087829486,0.803701137152247,0.182091168006717,0.655622074797121,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0.0915694648183434,0,0.574265537996172,0,1.6068392984416,0,0,0.307007349452259,0,0,0,0,0,1.15699440752685,0.384380134730212,1.40373983744043,0.4046311234222,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,3.90529780351831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9822462979337,0,8.29333895667927,0,0,0,0,0.211125408127993,0,0,0,0,0.123084805461069,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0.651884231532048,6.06102203490647,0.0915975934018623,2.66517388009317,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0.17472666824203,0,0.0967563312890851,0.146178634172371,0,0.0969890164884194,0,5.42353777873278,0.137041924646751,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,1.4279750469085,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,1.16495949527454,0.315132729228895,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709251365692784,0.314727528809989,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0.265841714557995,0,0.150257608997218,0,0,0.181848659202559,0.214821114084977,0,1.59238355479446,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0,0,1.47463745252232,0,0,0,0,0,0,0.699397538597222,3.73246356019784,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.60511520611056,0,0,0,0.147856086217045,0,0,0.413373593002368,0,0,0,0,0,0,0,0.336283722218824,0,0,0.443511850813194,0.230467975111559,0,0.0679697329768317,0,0,0,0.078493092850514,0.157115589916002,0,0,0,1.9110067515482,1.85839014859306,0,0,0,0,1.03608082081518,1.3657478167516,1.38251932362818,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0,0,0,0,0.235676547101626,0,0,0,0.339854229375634,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0.305966489225945,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.372448285775147,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0.162806537221949,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p5@HERC3 | |||
}} |
Revision as of 02:13, 22 January 2014
Short description: | p5@HERC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HERC3_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -16bp_to_ENST00000452979_5end |
EntrezGene: | HERC3 |
HGNC: | 4876 |
UniProt: | C9J8E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 6.38e-07 | 1 |