FFCP PHASE1:Hg19::chr4:88898025..88898048,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=6696 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11255 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000505146,uc003hrd.2_5end | |||
|coexpression_cluster_id=C455 | |||
|description=CAGE_peak_3_at_SPP1_5end | |||
|id=chr4:88898025..88898048,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.21e-33;6!CL:0000319;4.85e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.00e-33,6;CL:0000319,4.85e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;3.36e-12;2!DOID:3030;4.85e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.37e-12,2;DOID:3030,4.85e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.86e-34!57;UBERON:0005068!7.86e-34!57;UBERON:0006241!7.86e-34!57;UBERON:0007135!7.86e-34!57;UBERON:0002616!2.50e-28!59;UBERON:0003080!6.85e-26!42;UBERON:0003075!2.79e-25!86;UBERON:0007284!2.79e-25!86;UBERON:0002780!1.31e-24!41;UBERON:0001890!1.31e-24!41;UBERON:0006240!1.31e-24!41;UBERON:0001017!1.46e-24!82;UBERON:0007023!2.31e-24!115;UBERON:0000073!5.49e-24!94;UBERON:0001016!5.49e-24!94;UBERON:0005743!5.67e-24!86;UBERON:0002346!1.60e-23!90;UBERON:0000955!2.09e-23!69;UBERON:0006238!2.09e-23!69;UBERON:0002020!4.43e-23!34;UBERON:0003528!4.43e-23!34;UBERON:0001893!2.01e-22!34;UBERON:0002791!2.03e-21!33;UBERON:0003056!3.96e-21!61;UBERON:0001869!3.47e-20!32;UBERON:0002619!5.23e-15!22;UBERON:0000956!1.52e-14!25;UBERON:0000203!1.52e-14!25;UBERON:0000153!3.04e-14!129;UBERON:0007811!3.04e-14!129;UBERON:0000033!4.89e-14!123;UBERON:0002298!9.11e-13!8;UBERON:0001950!1.34e-12!20;UBERON:0004121!1.70e-12!169;UBERON:0000924!7.19e-12!173;UBERON:0006601!7.19e-12!173;UBERON:0002308!1.50e-10!9;UBERON:0000125!1.50e-10!9;UBERON:0000025!1.96e-10!194;UBERON:0003076!5.36e-09!15;UBERON:0003057!5.36e-09!15;UBERON:0004732!1.17e-08!13;UBERON:0000200!1.19e-08!6;UBERON:0000062!1.63e-08!511;UBERON:0002420!5.18e-08!9;UBERON:0007245!5.18e-08!9;UBERON:0010009!5.18e-08!9;UBERON:0010011!5.18e-08!9;UBERON:0000454!5.18e-08!9;UBERON:0009663!8.32e-08!7;UBERON:0002021!2.19e-07!5;UBERON:0004733!2.21e-07!12;UBERON:0002028!2.21e-07!12;UBERON:0007277!2.21e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;2.20e-14;9!UBERON:0002308;2.20e-14;9!UBERON:0002420;3.02e-14;9!UBERON:0007245;3.02e-14;9!UBERON:0010009;3.02e-14;9!UBERON:0010011;3.02e-14;9!UBERON:0000454;3.02e-14;9!UBERON:0009663;4.15e-12;7!UBERON:0001875;3.40e-11;2!UBERON:0006514;3.40e-11;2!UBERON:0003528;8.20e-09;34!UBERON:0002020;8.20e-09;34!UBERON:0002791;1.58e-08;32!UBERON:0002298;2.44e-08;6!UBERON:0001896;9.51e-08;3!UBERON:0005290;9.51e-08;3!UBERON:0001893;1.69e-07;34!UBERON:0002780;2.72e-07;41!UBERON:0001890;2.72e-07;41!UBERON:0000073;3.32e-07;53!UBERON:0002616;3.32e-07;53!UBERON:0002038;7.59e-07;1!UBERON:0009661;7.59e-07;1!UBERON:0002950;7.59e-07;1!UBERON:0001891;7.59e-07;1!UBERON:0001869;9.04e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000125,2.08e-14,9;UBERON:0002308,2.08e-14,9;UBERON:0002420,2.94e-14,9;UBERON:0007245,2.94e-14,9;UBERON:0010009,2.94e-14,9;UBERON:0010011,2.94e-14,9;UBERON:0000454,2.94e-14,9;UBERON:0001049,1.15e-12,56;UBERON:0005068,1.15e-12,56;UBERON:0006241,1.15e-12,56;UBERON:0007135,1.15e-12,56;UBERON:0009663,3.81e-12,7;UBERON:0000073,2.42e-11,53;UBERON:0002616,2.42e-11,53;UBERON:0001875,3.78e-11,2;UBERON:0006514,3.78e-11,2;UBERON:0003528,1.62e-10,34;UBERON:0002020,1.62e-10,34;UBERON:0007023,1.75e-09,114;UBERON:0003075,2.52e-09,82;UBERON:0007284,2.52e-09,82;UBERON:0002791,7.29e-09,32;UBERON:0002346,9.08e-09,86;UBERON:0002780,1.75e-08,41;UBERON:0001890,1.75e-08,41;UBERON:0003080,1.75e-08,41;UBERON:0006240,1.75e-08,41;UBERON:0001893,2.73e-08,34;UBERON:0000955,3.13e-08,68;UBERON:0006238,3.13e-08,68;UBERON:0002298,3.15e-08,6;UBERON:0001016,3.84e-08,89;UBERON:0010371,6.46e-08,104;UBERON:0001017,6.71e-08,81;UBERON:0001896,1.30e-07,3;UBERON:0005290,1.30e-07,3;UBERON:0010096,1.30e-07,3;UBERON:0002038,7.60e-07,1;UBERON:0009661,7.60e-07,1;UBERON:0002950,7.60e-07,1;UBERON:0001891,7.60e-07,1;UBERON:0009616,7.60e-07,1;UBERON:0010286,7.60e-07,1;UBERON:0001869,8.97e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821246550437305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.689491361473237,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.72038491523742,0,0,0.324547393654683,1.91542711029194,3.19099105245276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,3.93947209739836,13.5722473780758,6.24250881612659,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,6.02708509718552,23.1917333431335,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,1.05551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,1.26602474769461,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0.895105873378046,0,0,0,0,0,0.371072392647405,0,0,0,1.44999915086959,0.1137934482855,0,0,0,0,0,1.77148277162768,0.241192877250816,0,0.221158519862449,0.591095237907095,0.438770794307945,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,5.33034776018635,0,0,0,0,0,0,0,0.158936578980379,5.4859496777287,5.22344986109273,0,0,0,0,0,0,0,0,0.134802265961354,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,3.9845336444171,4.16024019039416,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.240476460754601,1.06726497369676,0,0,0,0,0,0.124252535565433,0,0,0,0,0,1.20084057741958,1.50595916781192,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0.0787831823072236,0.494495150286999,0.202210631562555,0.393709926058995,0,1.59045937961861,0.681017030557878,0,0,0,0,0,0,0,16.9432270693276,0.157363764404994,0,5.37862017998534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,2.24795422962573,0.171086837884329,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.07444650333337,0.500763722825999,1.14681839138014,1.10929051536852,0.310482014706917,0,0,1.06154382279153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30617366729152,0,0,0.276516872303462,0,0,0,0,7.12741435385786,0,0,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0.638535436228605,0.615349092722265,0.252071696221718,0.0691572524642179,0.484426936895553,2.85538840518309,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.270150338473579,0,0.826747186004736,0.19024743058172,0.546974809018219,0.548257766857182,0,0,0,0.535701835878287,0.336283722218824,0,0,0.266107110487916,0,0.171488009437418,0.883606528698812,0.131545547125698,0,0,0,0,0,0,1.94334832096759,1.9110067515482,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0.31020638566432,0.955538938977433,0.335566295393377,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,4.90771167787363,0.594092800654172,0,0,0,0,0,0,0,0,0,0,4.30018749454354,0,0,0,0,0,0,0,1.7663299476911,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,1.55149493792843,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p3@SPP1 | |||
}} | |||
Revision as of 02:11, 22 January 2014
| Short description: | p3@SPP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | No |
| DHS support(Yes/No): | No |
| Description: | CAGE_peak_3_at_SPP1_5end |
| Coexpression cluster: | C455_kidney_Macrophage_clear_endometrial_Monocytederived_large_spinal |
| Association with transcript: | 0bp_to_ENST00000505146, uc003hrd.2_5end |
| EntrezGene: | SPP1 |
| HGNC: | 11255 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| macrophage | 4.00e-33 | 6 |
| mucus secreting cell | 4.85e-07 | 1 |
| Ontology term | p-value | n |
|---|---|---|
| clear cell adenocarcinoma | 3.37e-12 | 2 |
| mucinous adenocarcinoma | 4.85e-07 | 1 |
