FFCP PHASE1:Hg19::chr3:129407466..129407477,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23023 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29116 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=22bp_to_uc003emy.3_5end | |||
|coexpression_cluster_id=C1127 | |||
|description=CAGE_peak_19_at_TMCC1_5end | |||
|id=chr3:129407466..129407477,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;2.81e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.78e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.78e-14;3!UBERON:0006222;2.81e-11;1!UBERON:0005425;2.81e-11;1!UBERON:0006601;1.04e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.19e-56!57;UBERON:0005068!2.19e-56!57;UBERON:0006241!2.19e-56!57;UBERON:0007135!2.19e-56!57;UBERON:0001017!2.68e-55!82;UBERON:0007023!1.23e-54!115;UBERON:0005743!2.88e-54!86;UBERON:0000073!2.71e-52!94;UBERON:0001016!2.71e-52!94;UBERON:0000955!1.38e-48!69;UBERON:0006238!1.38e-48!69;UBERON:0002616!3.51e-48!59;UBERON:0002780!4.72e-44!41;UBERON:0001890!4.72e-44!41;UBERON:0006240!4.72e-44!41;UBERON:0003080!8.45e-43!42;UBERON:0003075!6.28e-39!86;UBERON:0007284!6.28e-39!86;UBERON:0002020!2.80e-37!34;UBERON:0003528!2.80e-37!34;UBERON:0001893!4.88e-37!34;UBERON:0002346!1.24e-36!90;UBERON:0002791!2.51e-35!33;UBERON:0001869!5.82e-33!32;UBERON:0003056!1.84e-30!61;UBERON:0000033!2.24e-30!123;UBERON:0000153!1.18e-29!129;UBERON:0007811!1.18e-29!129;UBERON:0004121!4.79e-29!169;UBERON:0000924!5.11e-28!173;UBERON:0006601!5.11e-28!173;UBERON:0002619!1.39e-21!22;UBERON:0000956!6.37e-21!25;UBERON:0000203!6.37e-21!25;UBERON:0002308!1.05e-19!9;UBERON:0000125!1.05e-19!9;UBERON:0001950!4.74e-18!20;UBERON:0000025!1.34e-16!194;UBERON:0002420!1.84e-15!9;UBERON:0007245!1.84e-15!9;UBERON:0010009!1.84e-15!9;UBERON:0010011!1.84e-15!9;UBERON:0000454!1.84e-15!9;UBERON:0009663!2.00e-15!7;UBERON:0004111!3.39e-15!241;UBERON:0003076!3.37e-14!15;UBERON:0003057!3.37e-14!15;UBERON:0004732!1.22e-13!13;UBERON:0000477!1.96e-12!286;UBERON:0004733!1.00e-11!12;UBERON:0002028!1.00e-11!12;UBERON:0007277!1.00e-11!12;UBERON:0000475!5.62e-11!365;UBERON:0002298!1.42e-10!8;UBERON:0000483!2.25e-10!309;UBERON:0000119!3.91e-10!312;UBERON:0000200!3.57e-09!6;UBERON:0002680!4.02e-09!9;UBERON:0001895!4.02e-09!9;UBERON:0010092!4.02e-09!9;UBERON:0000369!9.13e-09!4;UBERON:0002435!9.13e-09!4;UBERON:0000204!9.13e-09!4;UBERON:0010082!9.13e-09!4;UBERON:0001894!2.69e-08!7;UBERON:0006222!2.69e-08!7;UBERON:0006331!2.91e-08!3;UBERON:0000988!8.19e-08!3;UBERON:0000349!1.08e-07!5;UBERON:0002771!1.71e-07!3;UBERON:0001872!1.97e-07!5;UBERON:0000064!2.94e-07!219;UBERON:0000481!3.03e-07!347;UBERON:0001871!4.04e-07!7;UBERON:0005383!5.63e-07!3;UBERON:0005382!5.63e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;3.51e-27;13!UBERON:0000073;3.19e-22;53!UBERON:0002616;3.19e-22;53!UBERON:0001875;8.59e-21;2!UBERON:0005162;8.59e-21;2!UBERON:0000122;8.59e-21;2!UBERON:0006514;8.59e-21;2!UBERON:0004733;1.02e-20;12!UBERON:0002028;1.02e-20;12!UBERON:0002420;4.77e-18;9!UBERON:0000125;4.77e-18;9!UBERON:0007245;4.77e-18;9!UBERON:0002308;4.77e-18;9!UBERON:0010009;4.77e-18;9!UBERON:0010011;4.77e-18;9!UBERON:0000454;4.77e-18;9!UBERON:0002298;1.79e-15;6!UBERON:0001896;3.38e-14;3!UBERON:0005290;3.38e-14;3!UBERON:0001016;4.00e-14;83!UBERON:0002780;4.50e-14;41!UBERON:0001890;4.50e-14;41!UBERON:0009663;1.59e-13;7!UBERON:0001017;4.14e-12;75!UBERON:0002038;1.06e-11;1!UBERON:0009661;1.06e-11;1!UBERON:0002950;1.06e-11;1!UBERON:0001891;1.06e-11;1!UBERON:0002336;2.81e-11;1!UBERON:0000941;2.81e-11;1!UBERON:0001785;2.81e-11;1!UBERON:0002464;2.81e-11;1!UBERON:0004904;2.81e-11;1!UBERON:0011215;2.81e-11;1!UBERON:0001018;2.81e-11;1!UBERON:0001021;2.81e-11;1!UBERON:0002473;2.81e-11;1!UBERON:0005340;2.81e-11;1!UBERON:0003544;2.81e-11;1!UBERON:0005970;2.81e-11;1!UBERON:0002316;2.81e-11;1!UBERON:0001020;2.81e-11;1!UBERON:0002437;2.81e-11;1!UBERON:0000955;5.89e-11;68!UBERON:0001893;7.08e-11;34!UBERON:0002680;1.21e-10;9!UBERON:0001895;1.21e-10;9!UBERON:0003528;4.58e-10;34!UBERON:0002020;4.58e-10;34!UBERON:0002791;2.06e-09;32!UBERON:0007023;9.14e-08;114!UBERON:0002037;1.11e-07;6!UBERON:0001869;6.15e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.70e-37,56;UBERON:0005068,5.70e-37,56;UBERON:0006241,5.70e-37,56;UBERON:0007135,5.70e-37,56;UBERON:0000073,7.68e-34,53;UBERON:0002616,7.68e-34,53;UBERON:0000955,1.14e-29,68;UBERON:0006238,1.14e-29,68;UBERON:0001016,7.81e-29,89;UBERON:0001017,2.34e-28,81;UBERON:0003075,2.63e-28,82;UBERON:0007284,2.63e-28,82;UBERON:0004732,3.29e-27,13;UBERON:0002346,6.72e-27,86;UBERON:0003076,1.03e-23,15;UBERON:0003057,1.03e-23,15;UBERON:0010371,6.89e-22,104;UBERON:0001875,6.37e-21,2;UBERON:0006514,6.37e-21,2;UBERON:0005162,7.05e-21,2;UBERON:0000122,7.05e-21,2;UBERON:0004733,1.02e-20,12;UBERON:0002028,1.02e-20,12;UBERON:0007277,1.02e-20,12;UBERON:0000125,3.75e-18,9;UBERON:0002308,3.75e-18,9;UBERON:0002420,4.28e-18,9;UBERON:0007245,4.28e-18,9;UBERON:0010009,4.28e-18,9;UBERON:0010011,4.28e-18,9;UBERON:0000454,4.28e-18,9;UBERON:0002780,6.15e-18,41;UBERON:0001890,6.15e-18,41;UBERON:0003080,6.15e-18,41;UBERON:0006240,6.15e-18,41;UBERON:0007023,1.98e-17,114;UBERON:0010314,8.89e-17,132;UBERON:0002298,2.24e-15,6;UBERON:0003056,1.38e-14,61;UBERON:0004121,4.47e-14,171;UBERON:0000924,4.47e-14,171;UBERON:0006601,4.47e-14,171;UBERON:0001896,5.40e-14,3;UBERON:0005290,5.40e-14,3;UBERON:0010096,5.40e-14,3;UBERON:0009663,1.40e-13,7;UBERON:0003528,2.54e-13,34;UBERON:0002020,2.54e-13,34;UBERON:0001893,2.64e-13,34;UBERON:0011216,2.79e-13,223;UBERON:0000025,1.92e-12,192;UBERON:0002038,1.06e-11,1;UBERON:0009661,1.06e-11,1;UBERON:0002950,1.06e-11,1;UBERON:0001891,1.06e-11,1;UBERON:0009616,1.06e-11,1;UBERON:0010286,1.06e-11,1;UBERON:0000941,2.42e-11,1;UBERON:0001785,2.42e-11,1;UBERON:0002464,2.42e-11,1;UBERON:0004904,2.42e-11,1;UBERON:0001021,2.42e-11,1;UBERON:0003902,2.42e-11,1;UBERON:0005425,2.42e-11,1;UBERON:0002336,2.68e-11,1;UBERON:0011215,2.68e-11,1;UBERON:0001018,2.68e-11,1;UBERON:0002473,2.68e-11,1;UBERON:0005340,2.68e-11,1;UBERON:0003544,2.68e-11,1;UBERON:0005970,2.68e-11,1;UBERON:0002316,2.68e-11,1;UBERON:0001020,2.68e-11,1;UBERON:0002437,2.68e-11,1;UBERON:0002680,9.64e-11,9;UBERON:0001895,9.64e-11,9;UBERON:0010092,9.64e-11,9;UBERON:0002791,1.62e-10,32;UBERON:0004111,1.93e-09,240;UBERON:0000483,6.60e-08,306;UBERON:0000119,8.39e-08,309;UBERON:0002037,9.58e-08,6;UBERON:0006215,9.58e-08,6;UBERON:0001869,1.98e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26602474769461,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,1.99613798001194,0,0.962059999958153,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,1.52581736317083,2.65390223834939,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,1.34802265961354,0.802577647298789,1.1713222286267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.886351143382302,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,1.20084057741958,1.64286454670392,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0,0,0,0.472699093843342,0.164831716762333,0.202210631562555,0.885847333632739,0,0.795229689809303,0.817220436669454,0,0.137539436597234,0,0,0,0.607495566580247,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0.904980694530854,1.45455861916959,0,0,0,0,0,0,0,0,0,1.08803560673895,0,0,0,0.628216385000937,0,0.244052529803926,1.001527445652,0,1.22021956690538,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0.513833800771676,0,2.07524016774297,0.205116364240755,0,0.622415272177961,0.645902582527404,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.472763092328763,0.781078098613847,0.620060389503552,0.697573912132975,0,0.548257766857182,0,0,0,0,0.336283722218824,0,0.91064876540519,0,0,0.685952037749674,0.611727596791485,0.591954962065642,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.0714765441766563,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615976841137482,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,3.26751040359795,0,0,0,0,0,0,0,0,0,0,2.15009374727177,0,0.815897882290976,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,1.13776295448085,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0.684466602170562,0,0,0,0.0814032686109745,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p19@TMCC1 | |||
}} |
Revision as of 21:20, 21 January 2014
Short description: | p19@TMCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_TMCC1_5end |
Coexpression cluster: | C1127_cerebellum_substantia_spinal_thalamus_medulla_occipital_globus |
Association with transcript: | 22bp_to_uc003emy.3_5end |
EntrezGene: | TMCC1 |
HGNC: | 29116 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.78e-11 | 1 |