FFCP PHASE1:Hg19::chr3:11267691..11267721,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3269 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5182 | |||
|TSSclassifier=strong | |||
|UniProt=C9J2E6 | |||
|association_with_transcript=0bp_to_ENST00000413416_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_HRH1_5end | |||
|id=chr3:11267691..11267721,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.02e-22!42;CL:0000860!3.51e-21!45;CL:0002009!9.11e-18!65;CL:0002194!3.66e-17!63;CL:0000576!3.66e-17!63;CL:0000040!3.66e-17!63;CL:0000559!3.66e-17!63;CL:0000766!4.93e-16!76;CL:0000076!1.33e-15!62;CL:0000557!2.19e-14!71;CL:0000839!2.57e-13!70;CL:0000063!2.83e-13!578;CL:0000548!2.82e-12!679;CL:0000004!2.82e-12!679;CL:0000255!2.82e-12!679;CL:0000012!3.32e-12!682;CL:0000066!1.13e-11!254;CL:0002139!1.32e-10!24;CL:0000071!1.55e-10!18;CL:0002546!1.55e-10!18;CL:0000213!1.64e-10!57;CL:0000215!1.64e-10!57;CL:0000763!1.69e-08!112;CL:0000049!1.69e-08!112;CL:0000115!3.49e-08!35;CL:0002078!7.17e-08!44;CL:0000003!1.79e-07!722;CL:0000222!3.96e-07!119;CL:0000220!5.12e-07!246;CL:1000413!8.89e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.72e-36;33!CL:0002057;2.72e-36;33!CL:0000473;4.22e-30;39!CL:0000234;4.22e-30;39!CL:0000576;9.03e-20;48!CL:0000766;6.81e-15;69!CL:0002139;3.62e-13;24!CL:0000071;5.28e-13;18!CL:0000115;9.88e-10;36!CL:1000413;4.38e-09;9!CL:0000076;1.10e-07;63!CL:0000213;2.79e-07;58!CL:0000215;2.79e-07;58!CL:0002543;7.50e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.22e-37,42;CL:0002057,1.22e-37,42;CL:0000473,1.37e-37,48;CL:0000234,1.37e-37,48;CL:0002194,5.93e-29,59;CL:0000576,5.93e-29,59;CL:0000040,5.93e-29,59;CL:0000559,5.93e-29,59;CL:0000766,8.51e-29,72;CL:0002009,1.43e-27,61;CL:0000839,1.73e-24,66;CL:0000557,6.26e-24,67;CL:0000763,2.06e-15,108;CL:0000049,2.06e-15,108;CL:0002139,1.54e-13,24;CL:0000071,2.84e-13,18;CL:0002546,2.84e-13,18;CL:0000076,8.47e-13,63;CL:0002087,9.30e-12,115;CL:0000213,1.23e-11,58;CL:0000215,1.23e-11,58;CL:0000738,1.69e-11,136;CL:0000115,7.44e-11,36;CL:0002078,2.03e-09,45;CL:1000413,2.23e-09,9;CL:0002031,9.68e-09,120;CL:0000037,1.97e-07,168;CL:0000066,2.11e-07,253;CL:0002543,5.80e-07,6;CL:0002032,9.57e-07,161;CL:0000837,9.57e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.57e-28;42!CL:0002546;5.28e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.01e-12!80;UBERON:0001986!1.55e-10!18;UBERON:0004638!1.55e-10!18;UBERON:0004852!1.55e-10!18;UBERON:0003081!3.63e-10!216;UBERON:0001474!1.02e-09!86;UBERON:0000487!4.57e-09!22;UBERON:0000926!2.41e-08!448;UBERON:0004120!2.41e-08!448;UBERON:0006603!2.41e-08!448;UBERON:0004765!3.00e-08!101;UBERON:0001434!3.00e-08!101;UBERON:0006914!6.84e-08!25;UBERON:0002390!2.39e-07!102;UBERON:0003061!2.39e-07!102;UBERON:0002193!2.60e-07!112;UBERON:0001981!2.75e-07!60;UBERON:0007500!2.75e-07!60;UBERON:0004537!2.75e-07!60;UBERON:0006965!2.75e-07!60;UBERON:0000055!4.99e-07!69;UBERON:0002049!6.73e-07!79;UBERON:0007798!6.73e-07!79;UBERON:0003915!8.89e-07!9;UBERON:0004700!8.89e-07!9;UBERON:0001917!8.89e-07!9;UBERON:0002405!9.94e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.28e-13;18!UBERON:0001986;5.28e-13;18!UBERON:0004852;5.28e-13;18!UBERON:0000487;6.72e-10;22!UBERON:0003915;4.38e-09;9!UBERON:0004700;4.38e-09;9!UBERON:0001917;4.38e-09;9!UBERON:0006914;3.02e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.89e-21,76;UBERON:0004765,7.68e-19,90;UBERON:0001474,2.32e-18,82;UBERON:0002405,1.06e-17,93;UBERON:0003081,3.63e-16,203;UBERON:0002390,4.02e-16,98;UBERON:0003061,4.02e-16,98;UBERON:0002193,4.33e-16,108;UBERON:0001434,1.30e-15,100;UBERON:0004638,2.84e-13,18;UBERON:0001986,2.84e-13,18;UBERON:0004852,2.84e-13,18;UBERON:0000487,4.15e-10,22;UBERON:0003915,2.23e-09,9;UBERON:0004700,2.23e-09,9;UBERON:0001917,2.23e-09,9;UBERON:0000926,1.47e-08,315;UBERON:0004120,1.47e-08,315;UBERON:0006603,1.47e-08,315;UBERON:0006914,2.01e-08,25;UBERON:0002204,2.03e-08,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,1.96682138424452,0.383829398097213,2.01260960310899,0,0.90361775633475,0.369754010166788,0,0,0,14.9578760303607,6.01633342410425,5.4252717678963,0,0,0.257575567634187,5.23433659606433,7.55751887377619,6.30718559088322,13.248455103624,16.8578834088949,23.5376841880279,16.6861587546847,20.2366958157989,26.9589742072987,12.0660988257816,25.819387343353,21.6682378550947,11.8592673911841,18.2847120538757,18.8767726933871,19.8954530041087,29.2045414639245,28.7701706609569,5.60747210317417,8.17800996248691,5.54092175692502,42.3705488397733,32.340957807395,41.7290906827035,22.1098825425934,25.0311800841697,33.447082084588,25.4267791106015,37.9325965067192,44.9376590166056,0,1.06302149982522,0.419317291016752,0.44931452458598,0,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,3.1811437882044,1.94653948121054,0,0.221729397462564,0.087834785693126,0.130979075497713,0.728590576585084,0.741568885568859,0.324547393654683,0.348259474598534,0,0,0,0.371457501329565,2.58391129576717,0.860234595106124,3.81854551768354,1.69592382577203,2.93649605346934,2.75118041940067,3.9709043641994,1.8089173141853,1.42306505074684,3.68192674041137,1.20848795132744,0.760272105718513,0.732186172644509,2.57364156242108,3.24056779152704,2.50039239195423,1.34717623575702,1.0135033243499,1.53316637465883,1.89853131913626,1.64881569537367,5.27121669744253,11.6334079244498,0,0.993943903390637,0.12663051166458,3.44263870114369,0.573673241497627,0.354668382198357,0,1.06748995729705,0.24666754841716,0.311211035399766,1.61652806483626,0.163461903113459,0,0,0,0.312160076830321,0.570471821544449,0,0.23486899728753,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0.226864366320042,0.179389635688862,0,0,0,0.206105058476878,0,0.18611685633159,0.337552664482532,0.0974370051611986,0.252433774244115,0,0,0,0.403008392910561,0.508681776931463,1.35282597214308,5.18217629122586,1.14721838155602,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.591534000199219,0,0.482022059766964,0.110293972732394,0.435758888184812,0,0.404493924480493,0,0,0,4.20725321410337,0,0,0,0,0,0,0.491953754172454,0.686271241194102,0.439001141634502,0,1.91005047582099,0.277765335475589,0,0,0,0,0.117408694235822,0.866198686566443,0,0,0,0,0.246217006087397,8.19014927987332,3.56714789492948,1.87467667973554,3.52762469217605,2.26840155587818,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.387815147273333,0,0.845302752556,0.797814349754612,0,0,0,0,0,0,1.64648067356154,1.30294473717494,0,0,0.904318131178758,0,0.199945982364114,1.2162378064119,0,0,0.239624855491583,0,0,0.289562613335158,0,0,0,0.197030760201927,0,0.256686072559497,0.254094624222463,0,0,0,0,0,0,2.07207756718018,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,3.01999881146064,2.02782359826544,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,0,0,0,0.308419387605311,0.532685175939381,0.574890092096664,1.03850885836724,0.232420756919918,0.483437798366489,2.00506470303285,0.184161977871793,0.459257792658427,0.182091168006717,0.262248829918848,0.902399225814824,0.231046011313244,0,0,0.211103257785751,0,1.36074964221213,0.647747748306418,3.08454505380579,0,0,2.29388645740534,0,0.671624264166535,0,0,0,0,0,0.412164046590889,0,0,4.59412430396938,1.30012049207304,0,0,0,0.15350367472613,0,0.107420244868274,0,0.170453254832202,0.0890320356467374,1.15699440752685,1.15314040419064,8.80527716212631,0.30347334256665,0,0,0,0.924100740528266,0.532306030317022,0,1.66791797193528,0.143124886741991,0,0.949138274156178,1.90630193923825,0,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0.353437207037059,0,0,0,0,2.92456187557541,0,0,0.141405431953713,0,0,2.65375590096488,1.31535265576129,0.578775534266688,0,0.811641507850816,0.6196469961995,0.281695602532241,0.286822704408103,0.294747123039363,1.07001315444375,0,0,0.658589785919804,0,0.349934720244983,0.769776901804097,0,1.08890984861323,0.470719003883896,1.72202149068492,0,1.33029046061003,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0.687010689511529,0,0.447352215784832,0.333698283423817,0.19538809540204,0,0,0,0,0,0.561421621224659,0.879049075631364,0,0,0.568272293612826,0,0,0,0,0,4.67496561096205,1.31843099381408,0,0.19924798825107,0.276283915531148,0,0.715880777515084,0,0.311039587661807,0.808815160325942,2.14825409610731,0,0.394573622547734,0,2.22273980289274,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,2.96249345202203,0,0,0,0,0.274792780205587,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0.635746315921515,0.421996129056054,0.652931232636591,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0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| |||
|short_description=p3@HRH1 | |||
}} |
Revision as of 17:22, 21 January 2014
Short description: | p3@HRH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HRH1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000413416_5end |
EntrezGene: | HRH1 |
HGNC: | 5182 |
UniProt: | C9J2E6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.89e-21 | 76 |
skeletal element | 7.68e-19 | 90 |
bone element | 2.32e-18 | 82 |
immune system | 1.06e-17 | 93 |
lateral plate mesoderm | 3.63e-16 | 203 |
hematopoietic system | 4.02e-16 | 98 |
blood island | 4.02e-16 | 98 |
hemolymphoid system | 4.33e-16 | 108 |
skeletal system | 1.30e-15 | 100 |
blood vessel endothelium | 2.84e-13 | 18 |
endothelium | 2.84e-13 | 18 |
cardiovascular system endothelium | 2.84e-13 | 18 |
simple squamous epithelium | 4.15e-10 | 22 |
endothelial tube | 2.23e-09 | 9 |
arterial system endothelium | 2.23e-09 | 9 |
endothelium of artery | 2.23e-09 | 9 |
mesoderm | 1.47e-08 | 315 |
mesoderm-derived structure | 1.47e-08 | 315 |
presumptive mesoderm | 1.47e-08 | 315 |
squamous epithelium | 2.01e-08 | 25 |
musculoskeletal system | 2.03e-08 | 167 |