FFCP PHASE1:Hg19::chr22:39638219..39638270,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4102 | |||
|description=CAGE_peak_at_chr22:39638219..39638270,+ | |||
|id=chr22:39638219..39638270,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.10e-13!18;CL:0000789!1.10e-13!18;CL:0002420!1.10e-13!18;CL:0002419!1.10e-13!18;CL:0000790!1.10e-13!18;CL:0000625!1.37e-10!11;CL:0000084!5.10e-08!25;CL:0000827!5.10e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.15e-19;18!CL:0000789;4.15e-19;18!CL:0002419;4.15e-19;18!CL:0000625;5.07e-17;11!CL:0000084;1.10e-12;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.59e-19,18;CL:0000789,2.59e-19,18;CL:0002420,2.59e-19,18;CL:0002419,2.59e-19,18;CL:0000790,2.59e-19,18;CL:0000625,4.20e-17,11;CL:0000084,7.99e-13,25;CL:0000827,7.99e-13,25;CL:0000838,8.69e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000790;4.15e-19;18!UBERON:0006601;2.42e-11;82!UBERON:0006215;6.26e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.97e-43!115;UBERON:0001049!2.17e-34!57;UBERON:0005068!2.17e-34!57;UBERON:0006241!2.17e-34!57;UBERON:0007135!2.17e-34!57;UBERON:0003075!6.92e-30!86;UBERON:0007284!6.92e-30!86;UBERON:0002616!2.65e-29!59;UBERON:0002780!5.12e-29!41;UBERON:0001890!5.12e-29!41;UBERON:0006240!5.12e-29!41;UBERON:0003080!6.25e-28!42;UBERON:0002346!2.07e-27!90;UBERON:0002020!3.59e-26!34;UBERON:0003528!3.59e-26!34;UBERON:0001893!5.04e-26!34;UBERON:0005743!3.64e-25!86;UBERON:0002791!4.26e-25!33;UBERON:0001869!4.83e-25!32;UBERON:0003056!2.53e-24!61;UBERON:0000955!2.68e-24!69;UBERON:0006238!2.68e-24!69;UBERON:0001017!2.98e-24!82;UBERON:0000073!2.37e-21!94;UBERON:0001016!2.37e-21!94;UBERON:0002619!1.63e-19!22;UBERON:0000956!8.90e-19!25;UBERON:0000203!8.90e-19!25;UBERON:0001950!1.30e-17!20;UBERON:0000153!3.05e-16!129;UBERON:0007811!3.05e-16!129;UBERON:0000033!2.23e-15!123;UBERON:0004121!2.50e-13!169;UBERON:0000924!1.92e-12!173;UBERON:0006601!1.92e-12!173;UBERON:0002420!4.80e-09!9;UBERON:0007245!4.80e-09!9;UBERON:0010009!4.80e-09!9;UBERON:0010011!4.80e-09!9;UBERON:0000454!4.80e-09!9;UBERON:0002308!7.19e-09!9;UBERON:0000125!7.19e-09!9;UBERON:0000064!3.23e-08!219;UBERON:0000025!9.55e-08!194;UBERON:0003076!1.02e-07!15;UBERON:0003057!1.02e-07!15;UBERON:0004111!2.09e-07!241;UBERON:0009663!3.03e-07!7;UBERON:0000200!3.99e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.24e-41;32!UBERON:0003528;5.42e-40;34!UBERON:0002020;5.42e-40;34!UBERON:0002619;3.86e-39;22!UBERON:0002791;1.42e-38;32!UBERON:0001893;2.11e-37;34!UBERON:0001950;3.44e-35;20!UBERON:0002780;3.49e-34;41!UBERON:0001890;3.49e-34;41!UBERON:0000956;8.47e-34;25!UBERON:0000203;8.47e-34;25!UBERON:0000073;1.27e-33;53!UBERON:0002616;1.27e-33;53!UBERON:0000955;5.93e-22;68!UBERON:0001017;1.31e-20;75!UBERON:0001016;2.11e-16;83!UBERON:0002420;4.47e-14;9!UBERON:0007245;4.47e-14;9!UBERON:0010009;4.47e-14;9!UBERON:0010011;4.47e-14;9!UBERON:0000454;4.47e-14;9!UBERON:0000125;6.40e-14;9!UBERON:0002308;6.40e-14;9!UBERON:0007023;8.12e-14;114!UBERON:0000200;4.46e-13;6!UBERON:0004733;7.82e-13;12!UBERON:0002028;7.82e-13;12!UBERON:0004732;1.10e-11;13!UBERON:0002298;1.27e-11;6!UBERON:0000349;3.28e-11;5!UBERON:0001871;1.24e-10;6!UBERON:0009663;1.54e-10;7!UBERON:0001872;2.37e-10;5!UBERON:0002021;7.77e-10;5!UBERON:0000369;8.88e-10;4!UBERON:0002435;8.88e-10;4!UBERON:0000204;8.88e-10;4!UBERON:0000178;4.53e-09;15!UBERON:0000179;4.53e-09;15!UBERON:0000463;4.53e-09;15!UBERON:0002680;1.81e-08;9!UBERON:0001895;1.81e-08;9!UBERON:0005383;9.34e-08;3!UBERON:0005382;9.34e-08;3!UBERON:0001870;2.16e-07;3!UBERON:0000988;5.83e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.38e-60,53;UBERON:0002616,3.38e-60,53;UBERON:0001049,4.56e-59,56;UBERON:0005068,4.56e-59,56;UBERON:0006241,4.56e-59,56;UBERON:0007135,4.56e-59,56;UBERON:0007023,1.40e-48,114;UBERON:0002780,2.81e-48,41;UBERON:0001890,2.81e-48,41;UBERON:0003080,2.81e-48,41;UBERON:0006240,2.81e-48,41;UBERON:0000955,3.32e-48,68;UBERON:0006238,3.32e-48,68;UBERON:0001869,5.76e-47,32;UBERON:0003528,7.94e-47,34;UBERON:0002020,7.94e-47,34;UBERON:0001017,3.55e-44,81;UBERON:0001893,9.95e-44,34;UBERON:0002791,2.09e-43,32;UBERON:0002619,1.92e-39,22;UBERON:0001016,2.14e-38,89;UBERON:0003075,6.09e-38,82;UBERON:0007284,6.09e-38,82;UBERON:0002346,1.49e-35,86;UBERON:0001950,1.76e-35,20;UBERON:0000956,4.59e-34,25;UBERON:0000203,4.59e-34,25;UBERON:0003056,5.54e-31,61;UBERON:0010371,1.87e-28,104;UBERON:0010314,5.79e-22,132;UBERON:0004121,6.04e-18,171;UBERON:0000924,6.04e-18,171;UBERON:0006601,6.04e-18,171;UBERON:0002420,2.42e-14,9;UBERON:0007245,2.42e-14,9;UBERON:0010009,2.42e-14,9;UBERON:0010011,2.42e-14,9;UBERON:0000454,2.42e-14,9;UBERON:0000125,5.16e-14,9;UBERON:0002308,5.16e-14,9;UBERON:0000200,4.55e-13,6;UBERON:0004733,1.03e-12,12;UBERON:0002028,1.03e-12,12;UBERON:0007277,1.03e-12,12;UBERON:0011216,1.32e-12,223;UBERON:0003076,6.48e-12,15;UBERON:0003057,6.48e-12,15;UBERON:0004732,1.41e-11,13;UBERON:0002298,1.82e-11,6;UBERON:0000349,2.38e-11,5;UBERON:0001871,7.96e-11,6;UBERON:0009663,1.06e-10,7;UBERON:0001872,2.08e-10,5;UBERON:0002021,6.84e-10,5;UBERON:0000369,8.85e-10,4;UBERON:0002435,8.85e-10,4;UBERON:0000204,8.85e-10,4;UBERON:0010082,8.85e-10,4;UBERON:0000025,1.04e-09,192;UBERON:0000178,7.38e-09,15;UBERON:0000179,7.38e-09,15;UBERON:0000463,7.38e-09,15;UBERON:0004111,1.42e-08,240;UBERON:0002680,2.11e-08,9;UBERON:0001895,2.11e-08,9;UBERON:0010092,2.11e-08,9;UBERON:0005383,9.60e-08,3;UBERON:0005382,9.60e-08,3;UBERON:0001870,2.28e-07,3;UBERON:0000988,7.31e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.601633342410425,0,1.11957737119962,0.971680998056939,0.77272670290256,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0.502497330513487,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93419540227666,2.35806457649499,2.87842098599313,0,2.93330039970231,3.78758244587787,3.89653456815823,0,0.589211814949674,2.21533894583621,0,1.0247305578054,0,0,0,0,0.296573126324121,2.67540828089713,1.04535523804977,0,0.766440987203842,2.06176467289578,1.77113784413652,4.14135038621326,2.60433381542567,6.65316431113862,0.903450714466637,1.91979916731628,3.74792179657038,3.07810427657222,6.56902397536837,2.21767417547206,2.13952156626806,2.89648807765598,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.43917392846563,2.0956652079634,0.364295288292542,0.370784442784429,0.324547393654683,0.522389211897802,0.26591592103773,0.476981248610684,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.625098097988558,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,1.96781501668982,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0,0.190254152234598,0,4.29243081047436,0.492434012174795,0,0.148631162288728,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,1.97030760201927,1.07813787429759,1.54011643535698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,1.17400313583789,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0.200506470303285,0.0920809889358963,0,0,0,0,0.15403067420883,1.56869953835371,0,0.105551628892876,0,0.340187410553031,0.431831832204279,0,0.541892875087706,0,0.509752546090077,0,0.671624264166535,0,0,0.512900250232778,0,0.325378394664303,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,2.02979043692868,3.0585488285695,2.27858874869665,2.62054953003568,2.46817363851717,4.53931317834902,0.540031437238115,3.17250070517708,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0.146508179271894,0,0,0,0,1.78178808499583,0.307160702099232,2.98244294329889,6.75213198770461,0,0,0.422250816255987,0,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,2.90799823828566,5.47331779154922,0,1.30213880542617,1.13697999995054,0,0,0,0,0,0,0,5.31444831488303,16.1599227758047,15.2581736317083,23.6639616252821,13.5951904718632,1.75508317723178,0,0,0.692552326534174,0,0,0.269272933229316,0.760531603454056,0.638002319463839,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.876214728748802,0,1.40558667435203,0,0.19566461893209,0,5.91876604274086,0,1.83643656978294,1.01098527405581,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,7.15411994301429,0,0.0801588202515337,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,1.64286454670392,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0.247247575143499,0.13480708770837,0,0,9.54275627771164,4.76711921390515,0,0.275078873194468,0.415440338029185,0,1.5476039091159,9.53768039530987,0,0.86686278029118,1.25891011523995,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,3.36135686540031,2.11572162788304,0,1.40963004463334,0.213574825135389,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,3.54427271986794,5.12510312588245,5.50840095108599,1.14681839138014,2.66229723688445,2.42175971471395,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,1.04349012362347,0,0,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0,0.343395705182793,0,0,0.192619830407303,0.214441591374926,0.521988583930423,0,0,0.489473409012935,0,0,0.877136198314828,0,0,0,1.28120759293973,0,0,6.35988806297962,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,7.96442391196098,1.41696576325585,3.99084647642878,2.2562800066483,1.51243017733031,7.67645502352819,7.42787969906515,0,0,0,0,0.808679663052368,0,0,0,0.376051641746286,0,3.90757005616546,0.261906694481422,0.655087670040387,0,4.86270609252441,1.56215619722769,3.9270491335225,6.72207588055412,2.18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| |||
|short_description=p@chr22:39638219..39638270,+ | |||
}} |
Revision as of 16:05, 21 January 2014
Short description: | p@chr22:39638219..39638270, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:39638219..39638270, + |
Coexpression cluster: | C4102_cerebellum_caudate_putamen_argyrophil_insula_nucleus_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.59e-19 | 18 |
alpha-beta T cell | 2.59e-19 | 18 |
immature T cell | 2.59e-19 | 18 |
mature T cell | 2.59e-19 | 18 |
immature alpha-beta T cell | 2.59e-19 | 18 |
CD8-positive, alpha-beta T cell | 4.20e-17 | 11 |
T cell | 7.99e-13 | 25 |
pro-T cell | 7.99e-13 | 25 |
lymphoid lineage restricted progenitor cell | 8.69e-07 | 52 |