FFCP PHASE1:Hg19::chr22:33255315..33255336,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=26bp_to_CU676956_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_4_at_CU676956_5end | |||
|id=chr22:33255315..33255336,- | |||
|ontology_enrichment_celltype=CL:0000057!6.26e-10!75;CL:0002334!1.99e-08!12;CL:0000055!3.54e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.47e-11;3!CL:0002570;2.75e-09;8!CL:0002593;7.20e-08;2!CL:0000134;9.88e-08;55!CL:0000349;1.10e-07;19!CL:0000723;1.84e-07;61!CL:0002583;3.35e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.88e-11,3;CL:0002570,2.59e-09,8;CL:0002593,6.65e-08,2;CL:0000349,1.16e-07,19;CL:0002583,2.53e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!6.36e-11!57;UBERON:0005631!1.31e-08!14;UBERON:0000158!1.31e-08!14;UBERON:0003124!1.62e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.47e-11;3!UBERON:0000920;2.47e-11;3!UBERON:0001013;4.82e-10;14!UBERON:0000478;1.78e-09;24!UBERON:0005631;1.36e-08;10!UBERON:0000158;1.36e-08;10!UBERON:0002456;7.20e-08;2!UBERON:0005406;8.09e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.01e-11,7;UBERON:0000920,2.88e-11,3;UBERON:0005631,6.91e-11,14;UBERON:0000158,6.91e-11,14;UBERON:0001013,4.27e-10,14;UBERON:0000478,1.84e-09,24;UBERON:0004923,1.04e-08,66;UBERON:0002456,6.65e-08,2;UBERON:0005406,6.88e-08,2 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.281908808191942,3.00219895059391,2.23480547213644,2.61701557230111,0,0,0,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,0,0.434539556882471,0,1.45990461090791,0,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,3.47880366186723,0.25326102332916,0,2.0078563452417,0.354668382198357,0,0,0.49333509683432,0,0,0,0,0,0.468642863667593,0,0,0.597794722207204,0.117434498643765,0,0.140450806702248,0,0.368502951935304,0.103325781175765,0,1.7308685049499,0,0.718618141816238,0,0,0,0,0,0.901428353439581,0.113432183160021,1.4351170855109,0.213557388818567,0.847727604638247,4.50136644126603,0,3.09168648054755,0.744467425326359,1.35021065793013,0.194874010322397,1.00973509697646,0,0.161646056818812,0.710019185033229,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0,0,0,3.12899064659632,0.643240938192885,0,0.464367928031979,0,0,0.337169380156203,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0.343135620597051,0.219500570817251,0,0,0,0.651616610620649,0,0,0,0,0,0,0.380508304469197,0,0,0,0.234004265139238,0,0,0,0,0.268675568108545,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0.411309970813294,2.10240140490742,0,0.336393253036082,0.43596006883328,0.51336800074665,1.03417372606222,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0.178428988797162,0.630809660135739,0.35142424497814,0,0,1.03473071292505,0,0.737476674166813,0.521301686808497,0.391602314925481,1.02943027143257,0,0,0,0.909382714338778,1.66435439510497,0.604780586659361,0.496215615637554,0.460385919864187,1.12264037773229,0.896974044789907,0,0.804269605718038,4.45254199334973,1.54209693802656,2.84098760501003,0.492762936082855,0.519254429183621,1.97557643381931,0,0.200506470303285,0,0.229628896329213,0,0,0,0,0,0,0,3.4120015221269,0.340187410553031,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,1.30151357865721,0.412164046590889,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.178064071293475,0,0.384380134730212,0,0.2023155617111,0.464845549297286,3.77774816196768,0,0,0,0.869932992075073,0,0,0,0,0.38126038784765,0.255897791311334,2.99557291623744,0,1.56989728039846,0.179872457583315,0.274537029736055,0,0.808729926293264,0,0.842516912477962,0.48763373908959,2.43713489631284,9.50851320810799,0,0.282810863907425,1.13008116620243,0,0,0,0,3.27947376023316,0,0,0.281695602532241,0.430234056612155,0.392996164052485,0,0,1.05553817648832,4.28083360847872,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0.121360521749513,0,0,4.29740072527842,0.593929361665277,3.99308912729002,0,0,0,0,0,0.398495976502139,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0.1137934482855,0,0.472775363535873,0,0,0,0,0,1.52581736317083,0,0,0,0,0.139423744278603,0.461701551022782,0,0.23056390438806,0,0.108647371922008,7.33702667383415,3.02272058226146,13.8589041764845,0,0.156980256395025,0.498635045700469,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0.995261931078505,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0.489961987071888,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0.126621591911757,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.713987523454252,0,0,0,0,0,0,1.95497680890578,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.201550417460179,1.08089965062721,0,0,0.412079291905832,0.13480708770837,0,0.423366660328922,0,0,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.262272940674991,0,0,0,0,1.98627591109629,0,0,0.864221491201268,0,0,0.164185041498678,0,0.79318464064088,0.293104467356165,0,0,0,0,0,0.533937062838473,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0.7520696820681,0.306345576763462,0.327872630709804,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0.124192805882767,0,0.249960815924213,0.151649117541648,0,3.76425311517075,0.468334905806882,0,1.19403842309499,1.40227985908335,1.66441758450784,0.568209015825267,0.251567901752575,0,0.457680136793847,0.756154618816195,0.15543720058278,0.147855149989634,0.159296767163702,0,0.465788870628778,1.65882483136342,2.39257543102195,2.60872530905867,0.450772826991655,2.28483127301277,2.03435366602331,0,0.107410557042488,0,0.796191777397232,0,1.71697852591396,2.020496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| |||
|short_description=p4@CU676956 | |||
}} |
Revision as of 15:30, 21 January 2014
Short description: | p4@CU676956 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CU676956_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 26bp_to_CU676956_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.88e-11 | 3 |
mesenchymal stem cell of adipose | 2.59e-09 | 8 |
smooth muscle cell of the internal thoracic artery | 6.65e-08 | 2 |
extraembryonic cell | 1.16e-07 | 19 |
subcutaneous preadipocyte | 2.53e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chorion | 1.01e-11 | 7 |
egg chorion | 2.88e-11 | 3 |
extraembryonic membrane | 6.91e-11 | 14 |
membranous layer | 6.91e-11 | 14 |
adipose tissue | 4.27e-10 | 14 |
extraembryonic structure | 1.84e-09 | 24 |
organ component layer | 1.04e-08 | 66 |
internal thoracic artery | 6.65e-08 | 2 |
perirenal fat | 6.88e-08 | 2 |