FFCP PHASE1:Hg19::chr22:25595823..25595826,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=1417 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2400 | |||
|TSSclassifier=weak | |||
|UniProt=P26998 | |||
|association_with_transcript=0bp_to_NM_004076,uc003abo.1_5end | |||
|coexpression_cluster_id=C369 | |||
|description=CAGE_peak_1_at_CRYBB3_5end | |||
|id=chr22:25595823..25595826,+ | |||
|ontology_enrichment_celltype=CL:0000306!1.87e-35!4;CL:0002222!1.87e-35!4;CL:0002224!1.87e-35!4;CL:0000075!2.17e-14!27;CL:0002322!2.37e-13!5;CL:0000325!5.75e-10!39;CL:0000148!4.01e-07!10;CL:0000541!4.01e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.41e-88;4!CL:0002222;1.41e-88;4!CL:0002224;1.41e-88;4!CL:0000075;4.97e-24;27!CL:0002322;2.97e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.41e-88,4;CL:0002222,1.41e-88,4;CL:0002224,1.41e-88,4;CL:0000075,4.97e-24,27;CL:0002322,2.97e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0010077!1.87e-35!4;UBERON:0005389!1.87e-35!4;UBERON:0000484!1.87e-35!4;UBERON:0002546!1.87e-35!4;UBERON:0000965!1.87e-35!4;UBERON:0001803!1.87e-35!4;UBERON:0003073!1.87e-35!4;UBERON:0005426!1.87e-35!4;UBERON:0000970!2.39e-19!20;UBERON:0002104!1.97e-18!21;UBERON:0000076!4.18e-18!8;UBERON:0000020!7.76e-17!23;UBERON:0001032!3.87e-16!24;UBERON:0004456!3.87e-16!24;UBERON:0007625!2.39e-13!11;UBERON:0000019!2.61e-13!19;UBERON:0000047!2.61e-13!19;UBERON:0004088!2.61e-13!19;UBERON:0003072!2.61e-13!19;UBERON:0003071!2.61e-13!19;UBERON:0004128!2.61e-13!19;UBERON:0001456!4.52e-12!21;UBERON:0001801!1.29e-10!14;UBERON:0000341!6.42e-09!2;UBERON:0005085!8.14e-09!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.41e-88;4!UBERON:0005389;1.41e-88;4!UBERON:0000484;1.41e-88;4!UBERON:0000965;1.41e-88;4!UBERON:0001803;1.41e-88;4!UBERON:0007625;5.96e-33;11!UBERON:0000970;3.67e-32;20!UBERON:0002104;1.13e-30;21!UBERON:0000020;4.37e-28;23!UBERON:0001032;5.93e-27;24!UBERON:0004456;5.93e-27;24!UBERON:0001801;4.10e-26;14!UBERON:0000019;1.68e-19;19!UBERON:0000047;1.68e-19;19!UBERON:0004088;1.68e-19;19!UBERON:0010230;1.68e-19;19!UBERON:0001456;9.85e-18;21!UBERON:0010371;4.85e-12;31!UBERON:0000490;1.78e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.41e-88,4;UBERON:0005389,1.41e-88,4;UBERON:0000484,1.41e-88,4;UBERON:0002546,1.41e-88,4;UBERON:0000965,1.41e-88,4;UBERON:0001803,1.41e-88,4;UBERON:0003073,1.41e-88,4;UBERON:0005426,1.41e-88,4;UBERON:0000076,6.81e-45,8;UBERON:0007625,5.96e-33,11;UBERON:0000970,1.13e-30,21;UBERON:0002104,1.13e-30,21;UBERON:0000020,5.93e-27,24;UBERON:0001032,5.93e-27,24;UBERON:0004456,5.93e-27,24;UBERON:0001801,4.10e-26,14;UBERON:0000019,1.42e-18,20;UBERON:0000047,1.42e-18,20;UBERON:0010312,1.42e-18,20;UBERON:0004088,1.42e-18,20;UBERON:0010230,1.42e-18,20;UBERON:0003072,1.42e-18,20;UBERON:0004128,1.42e-18,20;UBERON:0003071,1.42e-18,20;UBERON:0001456,5.72e-17,22;UBERON:0005085,2.68e-12,31;UBERON:0001444,4.54e-08,49;UBERON:0000033,3.76e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929551542956147,7.46359596110667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,343.153998726227,4.3441216867254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,77.7373748285032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@CRYBB3 | |||
}} |
Revision as of 15:00, 21 January 2014
Short description: | p1@CRYBB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CRYBB3_5end |
Coexpression cluster: | C369_Lens_eye_Ciliary_retina_H9_Retinal_Renal |
Association with transcript: | 0bp_to_NM_004076, uc003abo.1_5end |
EntrezGene: | CRYBB3 |
HGNC: | 2400 |
UniProt: | P26998 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.41e-88 | 4 |
vertebrate lens cell | 1.41e-88 | 4 |
lens epithelial cell | 1.41e-88 | 4 |
columnar/cuboidal epithelial cell | 4.97e-24 | 27 |
embryonic stem cell | 2.97e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.41e-88 | 4 |
transparent eye structure | 1.41e-88 | 4 |
simple cuboidal epithelium | 1.41e-88 | 4 |
cranial placode | 1.41e-88 | 4 |
lens of camera-type eye | 1.41e-88 | 4 |
epithelium of lens | 1.41e-88 | 4 |
lens placode | 1.41e-88 | 4 |
lens vesicle | 1.41e-88 | 4 |
external ectoderm | 6.81e-45 | 8 |
pigment epithelium of eye | 5.96e-33 | 11 |
eye | 1.13e-30 | 21 |
visual system | 1.13e-30 | 21 |
sense organ | 5.93e-27 | 24 |
sensory system | 5.93e-27 | 24 |
entire sense organ system | 5.93e-27 | 24 |
anterior segment of eyeball | 4.10e-26 | 14 |
camera-type eye | 1.42e-18 | 20 |
simple eye | 1.42e-18 | 20 |
immature eye | 1.42e-18 | 20 |
ocular region | 1.42e-18 | 20 |
eyeball of camera-type eye | 1.42e-18 | 20 |
optic cup | 1.42e-18 | 20 |
optic vesicle | 1.42e-18 | 20 |
eye primordium | 1.42e-18 | 20 |
face | 5.72e-17 | 22 |
ectodermal placode | 2.68e-12 | 31 |
subdivision of head | 4.54e-08 | 49 |
head | 3.76e-07 | 56 |