FFCP PHASE1:Hg19::chr22:25465786..25465831,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=85379 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29345 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-104bp_to_ENST00000401395_5end | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_4_at_KIAA1671_5end | |||
|id=chr22:25465786..25465831,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.87e-15!18;CL:0000789!5.87e-15!18;CL:0002420!5.87e-15!18;CL:0002419!5.87e-15!18;CL:0000790!5.87e-15!18;CL:0000084!1.05e-13!25;CL:0000827!1.05e-13!25;CL:0000838!1.27e-10!52;CL:0000542!2.54e-10!53;CL:0000051!2.54e-10!53;CL:0000624!3.59e-09!6;CL:0000625!7.67e-09!11;CL:0000842!8.94e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000895;6.82e-13;1!CL:0000624;1.22e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,6.82e-13,1;CL:0000895,6.82e-13,1;CL:0002436,6.82e-13,1;CL:0002427,6.82e-13,1;CL:0002428,6.82e-13,1;CL:0002429,6.82e-13,1;CL:0002433,6.82e-13,1;CL:0002431,6.82e-13,1;CL:0002432,6.82e-13,1;CL:0000624,1.17e-08,6;CL:0000893,4.42e-07,2;CL:0002489,4.42e-07,2;CL:0000809,4.42e-07,2;CL:0000808,4.42e-07,2;CL:0000894,4.42e-07,2;CL:0000806,4.42e-07,2;CL:0000807,4.42e-07,2;CL:0000805,4.42e-07,2;CL:0002425,4.42e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.48e-24;2!CL:0002427;6.82e-13;1!UBERON:0001045;6.82e-13;1!UBERON:0004872;1.27e-07;7!CL:0002425;4.42e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;6.82e-13;1!DOID:0060061;6.82e-13;1!DOID:8691;6.82e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.23e-13,1;DOID:0060061,4.23e-13,1;DOID:8691,4.23e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.03e-16!115;UBERON:0004177!1.58e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.44e-25;2!UBERON:0005058;3.44e-25;2!UBERON:0009113;3.44e-25;2!UBERON:0002372;3.14e-13;1!UBERON:0001961;3.14e-13;1!UBERON:0001744;3.14e-13;1!UBERON:0001042;3.14e-13;1!UBERON:0001735;3.14e-13;1!UBERON:0001154;6.82e-13;1!UBERON:0001153;6.82e-13;1!UBERON:0009854;6.82e-13;1!UBERON:0004177;1.16e-10;5!UBERON:0005057;1.16e-10;5!UBERON:0006562;3.00e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.21e-27,4;UBERON:0005058,2.21e-27,4;UBERON:0009113,2.21e-27,4;UBERON:0003295,2.21e-27,4;UBERON:0005562,2.21e-27,4;UBERON:0001042,2.82e-19,10;UBERON:0009145,2.82e-19,10;UBERON:0003351,1.73e-18,6;UBERON:0006562,1.49e-17,11;UBERON:0004177,6.14e-16,7;UBERON:0005057,6.14e-16,7;UBERON:0002372,3.76e-13,1;UBERON:0001961,3.76e-13,1;UBERON:0001744,3.76e-13,1;UBERON:0001735,3.76e-13,1;UBERON:0001154,4.77e-13,1;UBERON:0001153,4.77e-13,1;UBERON:0001045,4.77e-13,1;UBERON:0000974,2.47e-11,10;UBERON:0003408,2.47e-11,10;UBERON:0009722,2.36e-10,11;UBERON:0007690,2.36e-10,11;UBERON:0001557,2.86e-10,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,1.17903228824749,0.411202997999018,0,0.651844533267181,0,0,0.111410456885174,0,0.443067789167242,0,0.25618263945135,0.390178042679635,1.31550323682941,3.31620021343018,3.47763702882063,0.14828656316206,0.267540828089713,1.04535523804977,1.0197840842781,1.14966148080576,1.03088233644789,2.53019692019503,0,0.651083453856419,0.950452044448374,0.602300476311091,0.895906278080929,0,0.710331756132051,0,0.403213486449465,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.870648686496336,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.822724546172388,0,0.540031437238115,0,0,0,0,0,0,0.142283686696828,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,2.78947183551498,1.38141957765574,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.394584402849391,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,1.59989916683944,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,4.77957932786445,5.8970978581065,0,0.0636471582781649,0.404234377916439,0,0,2.02056159043763,0,0,0,0,0,0,0,0,0,0.665756774185513,1.00636896795513,0.320568492303233 | |||
|short_description=p4@KIAA1671 | |||
}} |
Revision as of 14:59, 21 January 2014
Short description: | p4@KIAA1671 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_KIAA1671_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -104bp_to_ENST00000401395_5end |
EntrezGene: | KIAA1671 |
HGNC: | 29345 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 6.82e-13 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 6.82e-13 | 1 |
mature CD4 single-positive thymocyte | 6.82e-13 | 1 |
resting double-positive thymocyte | 6.82e-13 | 1 |
double-positive blast | 6.82e-13 | 1 |
CD69-positive double-positive thymocyte | 6.82e-13 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 6.82e-13 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 6.82e-13 | 1 |
CD24-positive, CD4 single-positive thymocyte | 6.82e-13 | 1 |
CD4-positive, alpha-beta T cell | 1.17e-08 | 6 |
thymocyte | 4.42e-07 | 2 |
double negative thymocyte | 4.42e-07 | 2 |
double-positive, alpha-beta thymocyte | 4.42e-07 | 2 |
DN4 thymocyte | 4.42e-07 | 2 |
DN1 thymic pro-T cell | 4.42e-07 | 2 |
DN2 thymocyte | 4.42e-07 | 2 |
DN3 thymocyte | 4.42e-07 | 2 |
immature single positive thymocyte | 4.42e-07 | 2 |
early T lineage precursor | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.21e-27 | 4 |
hemolymphoid system gland | 2.21e-27 | 4 |
thymic region | 2.21e-27 | 4 |
pharyngeal gland | 2.21e-27 | 4 |
thymus primordium | 2.21e-27 | 4 |
chordate pharynx | 2.82e-19 | 10 |
pharyngeal region of foregut | 2.82e-19 | 10 |
pharyngeal epithelium | 1.73e-18 | 6 |
pharynx | 1.49e-17 | 11 |
hemopoietic organ | 6.14e-16 | 7 |
immune organ | 6.14e-16 | 7 |
tonsil | 3.76e-13 | 1 |
mucosa-associated lymphoid tissue | 3.76e-13 | 1 |
lymphoid tissue | 3.76e-13 | 1 |
tonsillar ring | 3.76e-13 | 1 |
vermiform appendix | 4.77e-13 | 1 |
caecum | 4.77e-13 | 1 |
midgut | 4.77e-13 | 1 |
neck | 2.47e-11 | 10 |
gland of gut | 2.47e-11 | 10 |
entire pharyngeal arch endoderm | 2.36e-10 | 11 |
early pharyngeal endoderm | 2.36e-10 | 11 |
upper respiratory tract | 2.86e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.23e-13 | 1 |
cutaneous T cell lymphoma | 4.23e-13 | 1 |
mycosis fungoides | 4.23e-13 | 1 |