FFCP PHASE1:Hg19::chr22:19746272..19746311,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr22:19746272..19746311,+ | |||
|id=chr22:19746272..19746311,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.31e-17!24;CL:0000115!2.60e-16!35;CL:0002078!7.62e-13!44;CL:0005020!6.50e-11!6;CL:0002138!6.50e-11!6;CL:0005022!6.50e-11!6;CL:0002368!7.02e-11!13;CL:0000071!9.81e-10!18;CL:0002546!9.81e-10!18;CL:0000213!2.19e-08!57;CL:0000215!2.19e-08!57;CL:0002202!9.37e-07!9;CL:0002632!9.37e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002138;2.67e-17;6!CL:0002139;2.12e-14;24!CL:0000115;6.88e-11;36!CL:0002078;1.50e-09;45!CL:0002144;1.71e-09;3!CL:0002564;3.69e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.72e-17,6;CL:0002138,2.72e-17,6;CL:0005022,2.72e-17,6;CL:0002139,2.09e-14,24;CL:0000115,1.34e-13,36;CL:0002078,1.56e-11,45;CL:0002144,1.71e-09,3;CL:0002564,3.14e-08,3;CL:0000213,4.62e-08,58;CL:0000215,4.62e-08,58 | |||
|ontology_enrichment_development_v019=CL:0005022;2.67e-17;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.11e-23!115;UBERON:0002465!1.69e-10!10;UBERON:0001986!9.81e-10!18;UBERON:0004638!9.81e-10!18;UBERON:0004852!9.81e-10!18;UBERON:0000468!2.18e-09!659;UBERON:0000487!1.23e-08!22;UBERON:0000477!1.32e-08!286;UBERON:0006914!1.68e-08!25;UBERON:0004111!4.76e-08!241;UBERON:0001473!7.28e-08!8;UBERON:0004536!7.28e-08!8;UBERON:0006558!7.28e-08!8;UBERON:0003103!5.46e-07!69;UBERON:0007196!6.47e-07!14;UBERON:0001558!6.47e-07!14;UBERON:0000065!9.05e-07!53;UBERON:0001004!9.12e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0002465;3.10e-17;10!UBERON:0001473;9.50e-13;8!UBERON:0004536;9.50e-13;8!UBERON:0006558;9.50e-13;8!UBERON:0010523;1.71e-09;3!UBERON:0001915;1.71e-09;3!UBERON:0001982;1.71e-09;3!UBERON:0002242;3.69e-08;3!UBERON:0011135;4.10e-08;5!UBERON:0002216;4.10e-08;5!UBERON:0011134;4.10e-08;5!UBERON:0002209;4.10e-08;5!UBERON:0002213;4.10e-08;5!UBERON:0007844;4.10e-08;5!UBERON:0011138;4.10e-08;5!UBERON:0001130;4.10e-08;5!UBERON:0001066;4.10e-08;5!UBERON:0001468;4.10e-08;5!UBERON:0004905;1.92e-07;8!UBERON:0000982;1.92e-07;8!UBERON:0004770;1.92e-07;8!UBERON:0000341;7.34e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,3.35e-17,10;UBERON:0001473,9.63e-13,8;UBERON:0004536,9.63e-13,8;UBERON:0006558,9.63e-13,8;UBERON:0007023,7.92e-11,114;UBERON:0010523,1.71e-09,3;UBERON:0001915,1.71e-09,3;UBERON:0001982,1.71e-09,3;UBERON:0011135,2.86e-08,5;UBERON:0002216,2.86e-08,5;UBERON:0011134,2.86e-08,5;UBERON:0002209,2.86e-08,5;UBERON:0002213,2.86e-08,5;UBERON:0005856,2.86e-08,5;UBERON:0005866,2.86e-08,5;UBERON:0005863,2.86e-08,5;UBERON:0007844,2.86e-08,5;UBERON:0011138,2.86e-08,5;UBERON:0001130,2.86e-08,5;UBERON:0001066,2.86e-08,5;UBERON:0001468,2.86e-08,5;UBERON:0002242,3.14e-08,3;UBERON:0003068,3.14e-08,3;UBERON:0002328,3.14e-08,3;UBERON:0004880,3.14e-08,3;UBERON:0004905,1.48e-07,8;UBERON:0000982,1.48e-07,8;UBERON:0004770,1.48e-07,8;UBERON:0000341,7.25e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,0,0,1.8564952944007,0.662794751455832,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,1.38856200643038,0,0,6.05259692268148,0.626984899610432,10.0782536076038,13.8748842447817,43.5136796594071,15.3075140501476,12.9246257972147,74.4389275521917,0,7.29127753093584,0.803697554556718,0.898117490504679,0.337834441449967,0,0.949265659568129,0.549605231791222,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0.587172493218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,19.9225697910282,32.8719713929394,26.4453271606092,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,6.63449969730471,10.0883967391873,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,9.18895486672911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57652132610194,3.50119364741774,1.35632511849868,0,0,0,0,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0.647747748306418,4.62681758070868,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,1.72971060628596,2.16941611240793,0.30347334256665,0,0,0,0,0,0,0,0,0,1.58189712359363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.384888450902048,2.01090682660736,2.17781969722645,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,6.75601306009579,2.59022384726391,1.38141957765574,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.658156191461918,0,0,5.54041861227339,0,0,0,0,2.87101043758728,0,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59223616106011,0.611030144933625,0,0,0,0,38.5237270703419,0,0,0,0,0.789168805698781,2.41981432097328,0,1.0741718536843,0,0,0,0,0,0,0,27.8736092756409,0,0,0,2.62090002363045,0,0,0,0,4.26751672549045,0,0.90392296312213,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0.199679000498991,0.429226048136571,1.11585728720936,0.268733889946905,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.524545881349981,0,0,0,0,0.662091970365432,22.1213627759632,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.533937062838473,2.82967749179399,1.24271716604159,4.46549419630756,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,2.03067886542995,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,1.64477330057155,8.9318012110073,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,1.17739639275771,0,0,0.913158720509496,0.215927591218621,0,0.357382720883282,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,1.64260490969995,0,1.94284397223656,0,0,7.84872599131953,0,0,0,0.694567422971502,1.31135736302374,0,1.22574160876953,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,2.2936464170227,0,1.26217249754548,0.0679914901909147,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,1.28823786971007,3.48353369203032,0,0.103432995861895,22.389568099603,17.8548323597805,0,0.124149428591716,0,3.50059370529907,6.06351566874658,56.170920957416,99.5898906158168,3.16554649168561,3.22749924267044,21.9555835320369,0,0,0,0,0,2.32258743947446,2.03448089157869,3.32878387092756,4.83057104618463,0 | |||
|short_description=p@chr22:19746272..19746311,+ | |||
}} |
Revision as of 14:36, 21 January 2014
Short description: | p@chr22:19746272..19746311, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:19746272..19746311, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.72e-17 | 6 |
endothelial cell of lymphatic vessel | 2.72e-17 | 6 |
vascular lymphangioblast | 2.72e-17 | 6 |
endothelial cell of vascular tree | 2.09e-14 | 24 |
endothelial cell | 1.34e-13 | 36 |
meso-epithelial cell | 1.56e-11 | 45 |
capillary endothelial cell | 1.71e-09 | 3 |
nucleus pulposus cell of intervertebral disc | 3.14e-08 | 3 |
lining cell | 4.62e-08 | 58 |
barrier cell | 4.62e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 3.35e-17 | 10 |
lymphatic vessel | 9.63e-13 | 8 |
lymph vasculature | 9.63e-13 | 8 |
lymphatic part of lymphoid system | 9.63e-13 | 8 |
adult organism | 7.92e-11 | 114 |
microcirculatory vessel | 1.71e-09 | 3 |
endothelium of capillary | 1.71e-09 | 3 |
capillary | 1.71e-09 | 3 |
intervertebral cartilage | 2.86e-08 | 5 |
symphysis | 2.86e-08 | 5 |
nonsynovial joint | 2.86e-08 | 5 |
fibrous joint | 2.86e-08 | 5 |
cartilaginous joint | 2.86e-08 | 5 |
developing mesenchymal condensation | 2.86e-08 | 5 |
pre-cartilage condensation | 2.86e-08 | 5 |
cartilaginous condensation | 2.86e-08 | 5 |
cartilage element | 2.86e-08 | 5 |
post-cranial axial skeletal system | 2.86e-08 | 5 |
vertebral column | 2.86e-08 | 5 |
intervertebral disk | 2.86e-08 | 5 |
intervertebral joint | 2.86e-08 | 5 |
nucleus pulposus | 3.14e-08 | 3 |
axial mesoderm | 3.14e-08 | 3 |
notochord | 3.14e-08 | 3 |
chordamesoderm | 3.14e-08 | 3 |
articulation | 1.48e-07 | 8 |
skeletal joint | 1.48e-07 | 8 |
articular system | 1.48e-07 | 8 |
throat | 7.25e-07 | 2 |