FFCP PHASE1:Hg19::chr21:20022871..20022875,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr21:20022871..20022875,- | |||
|id=chr21:20022871..20022875,- | |||
|ontology_enrichment_celltype=CL:0000054!1.45e-07!2;CL:0000137!1.45e-07!2;CL:0000092!1.45e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000054;1.16e-19;2!CL:0000137;1.16e-19;2!CL:0000092;1.16e-19;2!CL:0000319;1.05e-10;1!CL:0002092;3.75e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.28e-19,2;CL:0000137,1.28e-19,2;CL:0000092,1.28e-19,2;CL:0000319,6.77e-11,1;CL:0002092,4.03e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.05e-10;1 | |||
|ontology_enrichment_disease=DOID:162!5.13e-08!235;DOID:5409!8.18e-08!4;DOID:14566!1.12e-07!239;DOID:200!1.45e-07!2;DOID:4305!1.45e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:200;1.16e-19;2!DOID:4305;1.16e-19;2!DOID:201;6.88e-15;6!DOID:0060100;6.88e-15;6!DOID:4960;2.93e-11;1!DOID:0070004;2.93e-11;1!DOID:0060085;1.05e-10;1!DOID:3165;1.05e-10;1!DOID:0060121;1.05e-10;1!DOID:2438;1.05e-10;1!DOID:3030;1.05e-10;1!DOID:4418;1.05e-10;1!DOID:5409;1.73e-10;4!DOID:2531;1.36e-08;51!DOID:0060083;1.36e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:200,1.28e-19,2;DOID:4305,1.28e-19,2;DOID:201,7.39e-15,6;DOID:0060100,7.39e-15,6;DOID:4960,3.41e-11,1;DOID:0070004,3.41e-11,1;DOID:3030,6.77e-11,1;DOID:2531,7.00e-11,51;DOID:0060083,7.00e-11,51;DOID:0060085,8.22e-11,1;DOID:3165,8.22e-11,1;DOID:0060121,8.22e-11,1;DOID:2438,8.22e-11,1;DOID:4418,8.22e-11,1;DOID:5409,1.78e-10,4;DOID:0050686,1.45e-09,137;DOID:162,5.55e-09,235;DOID:14566,9.74e-09,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002371;6.98e-13;12!UBERON:0000941;1.05e-10;1!UBERON:0001282;1.05e-10;1!UBERON:0007195;1.05e-10;1!UBERON:0001785;1.05e-10;1!UBERON:0002464;1.05e-10;1!UBERON:0004904;1.05e-10;1!UBERON:0009842;1.05e-10;1!UBERON:0003704;1.05e-10;1!UBERON:0001021;1.05e-10;1!UBERON:0001171;1.05e-10;1!UBERON:0001172;1.05e-10;1!UBERON:0001474;1.19e-08;18!UBERON:0002405;1.19e-08;27!UBERON:0002390;4.58e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.97e-11,1;UBERON:0001785,9.97e-11,1;UBERON:0002464,9.97e-11,1;UBERON:0004904,9.97e-11,1;UBERON:0001021,9.97e-11,1;UBERON:0003902,9.97e-11,1;UBERON:0005425,9.97e-11,1;UBERON:0007195,1.61e-10,1;UBERON:0001282,1.77e-10,1;UBERON:0009842,1.77e-10,1;UBERON:0003704,1.77e-10,1;UBERON:0001171,1.77e-10,1;UBERON:0001172,1.77e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74804275804612,0,0,0,0,0.835218521685727,0,0,0,1.4098700508785,0,0,0.970884173996107,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02547850262301,0,0,0,0,0,0,0,0,0,0.676786981851542,1.17637520590644,1.84603745673427,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.959293472527256,1.58971689362392,0,0.586654148204409,0,0,0.799238438328521,0,0,3.94668495082519,0,0,0,0.815425236441684,1.67364554099733,0,0.577901179803038,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,1.72041036127604,0,0,0,3.09986963389468,3.40509572140102,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0.80057074828547,0,0,0,0,0,0.205116364240755,0,0,0,1.42769420259154,0,0,0,0,1.1441462864015,0,0,0,2.42046082444224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,3.44817345865414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54596118010839,0,0.329821550236287,2.2644426535001,0,0,0,0,0,0,0,0,0,0,0,1.19929387109915,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,2.91542842709595,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:20022871..20022875,- | |||
}} |
Revision as of 13:05, 21 January 2014
Short description: | p@chr21:20022871..20022875, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:20022871..20022875, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.28e-19 | 2 |
osteocyte | 1.28e-19 | 2 |
osteoclast | 1.28e-19 | 2 |
mucus secreting cell | 6.77e-11 | 1 |
bone marrow cell | 4.03e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.97e-11 | 1 |
cranial nerve | 9.97e-11 | 1 |
nerve trunk | 9.97e-11 | 1 |
nerve connecting eye with brain | 9.97e-11 | 1 |
nerve | 9.97e-11 | 1 |
retinal neural layer | 9.97e-11 | 1 |
presumptive neural retina | 9.97e-11 | 1 |
stroma of bone marrow | 1.61e-10 | 1 |
intralobular bile duct | 1.77e-10 | 1 |
acinus | 1.77e-10 | 1 |
intrahepatic bile duct | 1.77e-10 | 1 |
portal lobule | 1.77e-10 | 1 |
hepatic acinus | 1.77e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 1.28e-19 | 2 |
bone giant cell tumor | 1.28e-19 | 2 |
connective tissue cancer | 7.39e-15 | 6 |
musculoskeletal system cancer | 7.39e-15 | 6 |
bone marrow cancer | 3.41e-11 | 1 |
myeloma | 3.41e-11 | 1 |
mucinous adenocarcinoma | 6.77e-11 | 1 |
hematologic cancer | 7.00e-11 | 51 |
immune system cancer | 7.00e-11 | 51 |
organ system benign neoplasm | 8.22e-11 | 1 |
skin benign neoplasm | 8.22e-11 | 1 |
integumentary system benign neoplasm | 8.22e-11 | 1 |
dermis tumor | 8.22e-11 | 1 |
cutaneous fibrous histiocytoma | 8.22e-11 | 1 |
lung small cell carcinoma | 1.78e-10 | 4 |
organ system cancer | 1.45e-09 | 137 |
cancer | 5.55e-09 | 235 |
disease of cellular proliferation | 9.74e-09 | 239 |