FFCP PHASE1:Hg19::chr20:43439119..43439165,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140730 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16183 | |||
|TSSclassifier=weak | |||
|UniProt=Q9H426,A4FU94,E1P613 | |||
|association_with_transcript=-140bp_to_ENST00000372851,NM_001205317,NM_182970_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_RIMS4_5end | |||
|id=chr20:43439119..43439165,- | |||
|ontology_enrichment_celltype=CL:0000047!1.33e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.07e-08;6!CL:0000404;1.07e-08;6!CL:0002322;1.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.32e-11,8;CL:0000540,9.30e-09,6;CL:0000031,9.30e-09,6;CL:0000404,9.30e-09,6;CL:0002322,9.04e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.22e-11;82!CL:0000031;1.07e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.10e-41!115;UBERON:0001017!9.79e-40!82;UBERON:0005743!3.94e-38!86;UBERON:0000073!7.53e-38!94;UBERON:0001016!7.53e-38!94;UBERON:0001049!3.27e-37!57;UBERON:0005068!3.27e-37!57;UBERON:0006241!3.27e-37!57;UBERON:0007135!3.27e-37!57;UBERON:0003080!4.79e-33!42;UBERON:0002780!2.71e-32!41;UBERON:0001890!2.71e-32!41;UBERON:0006240!2.71e-32!41;UBERON:0002616!4.94e-32!59;UBERON:0000955!3.69e-31!69;UBERON:0006238!3.69e-31!69;UBERON:0003075!5.22e-29!86;UBERON:0007284!5.22e-29!86;UBERON:0002020!2.02e-27!34;UBERON:0003528!2.02e-27!34;UBERON:0001893!2.74e-27!34;UBERON:0002346!1.10e-26!90;UBERON:0001869!2.00e-26!32;UBERON:0002791!2.92e-26!33;UBERON:0002619!7.43e-24!22;UBERON:0001950!4.86e-22!20;UBERON:0003056!2.12e-21!61;UBERON:0004121!3.19e-20!169;UBERON:0000956!6.39e-20!25;UBERON:0000203!6.39e-20!25;UBERON:0000924!4.20e-19!173;UBERON:0006601!4.20e-19!173;UBERON:0000153!3.35e-18!129;UBERON:0007811!3.35e-18!129;UBERON:0000033!2.93e-17!123;UBERON:0002420!3.04e-09!9;UBERON:0007245!3.04e-09!9;UBERON:0010009!3.04e-09!9;UBERON:0010011!3.04e-09!9;UBERON:0000454!3.04e-09!9;UBERON:0001871!3.96e-09!7;UBERON:0002308!6.04e-09!9;UBERON:0000125!6.04e-09!9;UBERON:0000922!6.71e-09!612;UBERON:0000468!1.74e-08!659;UBERON:0000064!2.94e-08!219;UBERON:0000200!1.29e-07!6;UBERON:0009663!2.27e-07!7;UBERON:0002298!3.82e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.07e-37;32!UBERON:0002619;7.64e-37;22!UBERON:0003528;1.68e-35;34!UBERON:0002020;1.68e-35;34!UBERON:0002791;6.16e-35;32!UBERON:0001950;6.05e-34;20!UBERON:0001893;2.82e-33;34!UBERON:0002780;1.73e-32;41!UBERON:0001890;1.73e-32;41!UBERON:0000956;1.23e-31;25!UBERON:0000203;1.23e-31;25!UBERON:0000073;1.84e-26;53!UBERON:0002616;1.84e-26;53!UBERON:0000955;2.51e-20;68!UBERON:0001017;7.65e-19;75!UBERON:0001016;4.45e-18;83!UBERON:0007023;2.88e-12;114!UBERON:0001871;4.79e-12;6!UBERON:0002420;2.40e-11;9!UBERON:0007245;2.40e-11;9!UBERON:0010009;2.40e-11;9!UBERON:0010011;2.40e-11;9!UBERON:0000454;2.40e-11;9!UBERON:0000200;4.03e-11;6!UBERON:0000125;6.65e-11;9!UBERON:0002308;6.65e-11;9!UBERON:0001872;1.91e-09;5!UBERON:0002021;2.15e-09;5!UBERON:0000349;4.34e-09;5!UBERON:0009663;1.81e-08;7!UBERON:0011216;2.66e-08;132!UBERON:0000369;1.54e-07;4!UBERON:0002435;1.54e-07;4!UBERON:0000204;1.54e-07;4!UBERON:0001894;3.95e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.39e-54,89;UBERON:0001017,1.11e-53,81;UBERON:0000073,7.16e-48,53;UBERON:0002616,7.16e-48,53;UBERON:0001049,6.14e-47,56;UBERON:0005068,6.14e-47,56;UBERON:0006241,6.14e-47,56;UBERON:0007135,6.14e-47,56;UBERON:0002780,1.39e-44,41;UBERON:0001890,1.39e-44,41;UBERON:0003080,1.39e-44,41;UBERON:0006240,1.39e-44,41;UBERON:0007023,1.57e-42,114;UBERON:0000955,6.13e-42,68;UBERON:0006238,6.13e-42,68;UBERON:0001869,6.55e-42,32;UBERON:0003528,2.63e-41,34;UBERON:0002020,2.63e-41,34;UBERON:0001893,6.84e-39,34;UBERON:0002791,9.83e-39,32;UBERON:0002619,9.07e-37,22;UBERON:0003075,1.80e-36,82;UBERON:0007284,1.80e-36,82;UBERON:0002346,4.90e-34,86;UBERON:0001950,6.82e-34,20;UBERON:0003056,1.06e-32,61;UBERON:0000956,1.43e-31,25;UBERON:0000203,1.43e-31,25;UBERON:0011216,1.32e-26,223;UBERON:0010371,1.92e-25,104;UBERON:0004121,6.18e-25,171;UBERON:0000924,6.18e-25,171;UBERON:0006601,6.18e-25,171;UBERON:0010314,8.18e-24,132;UBERON:0001871,5.56e-12,6;UBERON:0002420,1.80e-11,9;UBERON:0007245,1.80e-11,9;UBERON:0010009,1.80e-11,9;UBERON:0010011,1.80e-11,9;UBERON:0000454,1.80e-11,9;UBERON:0000200,4.13e-11,6;UBERON:0000125,4.79e-11,9;UBERON:0002308,4.79e-11,9;UBERON:0000025,2.63e-10,192;UBERON:0001872,1.87e-09,5;UBERON:0002021,2.07e-09,5;UBERON:0000349,4.47e-09,5;UBERON:0009663,1.39e-08,7;UBERON:0004111,1.11e-07,240;UBERON:0000369,1.14e-07,4;UBERON:0002435,1.14e-07,4;UBERON:0000204,1.14e-07,4;UBERON:0010082,1.14e-07,4;UBERON:0000922,1.23e-07,592;UBERON:0001894,4.32e-07,7;UBERON:0006222,4.32e-07,7 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,5.06599756336621,0.631719873426831,1.56711376919903,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0.626909442956176,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,6.61444331263449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0.272746120590835,0,4.02513230227665,4.77107165957347,2.67246068599892,1.96956004529204,2.27088765788066,2.91981887260664,0,0,0,0,0,0.354920400119532,0.674338760312407,0,0,0,0.474541238222193,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,1.96781501668982,0,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,1.27047312111232,6.50699269288109,2.31986643833309,5.69555302136786,1.27587750330633,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,3.10419213877515,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0.322260734604821,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,1.89996871767898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0.962479855263359,0,0,0,0,0.956557636372934,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0.293016358543788,1.69904730449319,0,0,0,0,0,5.96488588659779,10.1281979815569,0,0,0.422250816255987,2.98871982376605,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,28.1106496367613,10.6683312886129,45.9111735402747,8.33368835472746,0,2.17499872630438,0,0,2.12748913591143,1.03423011972439,2.62444152044929,3.64612489359914,1.77148277162768,18.6924479869382,0,8.0722859749794,8.86642856860643,10.9692698576986,2.28770773389879,0,0.923403102045565,0,0.46112780877612,0.179515288819544,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,1.68798451622422,1.30586246527318,0.141353071433941,13.6324843037517,2.98578579323551,0.265372693510018,1.22206028986725,0,0.247127877893006,0,0.67401132980677,0,8.90204893756289,0,0,0.242780379534093,0,1.20990716048664,21.1190205525038,3.85438135733777,2.1045278718029,1.45163467956146,0,0,0,0,0.284609546029793,0.138674673013139,1.04135843001079,0.0979923974143777,0,4.36816670605075,0,1.16107597546902,1.75414361006845,1.72442459811739,0.0969890164884194,0.264768380074501,4.74559555639118,0,0,15.9543205808814,1.56441106187842,0,0.426905989478705,0.999048047910651,3.02589876023623,0,0.514784993585894,0,0,1.41416420770077,0,0,0,0,4.20294202096853,2.73810757783986,0,0,0,1.39641200636127,1.60412296808179,0,1.19807400299395,0,0,0,0,0,0,0,0,0,0,3.18091875923721,11.4410861133724,3.85807556316046,3.85110422472255,1.66176135211674,0,0,17.131374977563,0.335434687599266,0.157611414598396,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0.246277562248017,0,0,0,0,2.97350799631566,3.17358244182456,0.171086837884329,0,0.320362237703084,0.157204305099666,2.48543433208317,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,8.86068179966986,12.5687052849022,9.51451073369399,0.573409195690071,1.88579387612649,7.32737554708325,0.138348634936231,0,0,0.856396000634902,0,0.936669811613763,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770479321629213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2311242752281,0,0,0.163565394255844,4.25892803500336,4.66968526632067,0,0,0,0,0,0,0,0,6.52261293648624,9.81205783709804,0,3.38549878395243,0,0,0,0,0,0,0,0.352675943690684,0,17.8557245768157,2.8339315265117,12.1321732883435,19.0758218743902,18.6533055204071,18.3266719030177,12.4336247136525,1.42769420259154,0,0.353909170043221,0,0,0,0,5.76857044137197,1.35378591028663,0,0,0,0,0,14.3179679390997,5.46754669029693,9.92096623205684,14.7758837751803,10.9394961803644,0,6.45074531906083,0,0,1.07140367175657,1.3451348888753,1.82089681270989,2.27662191351298,0,0,0,4.55397210944772,20.3895598044832,3.19123370386714,0,1.0989032999072,19.6394487395002,0,5.47895232305697,0,0,1.71543706023975,2.3702041759909,0.348724276104376,5.38960644137996,0,0,0.3414369541879,0,0,0,0,0.423387050190929,0.4582137370881,0.93061915699296,0.955538938977433,2.23710863595585,0,0,0,0,2.3196288626764,0,0,0,1.30812099855325,0,8.46541978939804,0.150962843566674,0.231522474323834,2.40415516554353,0,0.490296643507811,0.707029641304878,0.785233868459781,0,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| |||
|short_description=p1@RIMS4 | |||
}} |
Revision as of 11:23, 21 January 2014
Short description: | p1@RIMS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RIMS4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -140bp_to_ENST00000372851, NM_001205317, NM_182970_5end |
EntrezGene: | RIMS4 |
HGNC: | 16183 |
UniProt: | Q9H426A4FU94E1P613 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.32e-11 | 8 |
neuron | 9.30e-09 | 6 |
neuroblast | 9.30e-09 | 6 |
electrically signaling cell | 9.30e-09 | 6 |
embryonic stem cell | 9.04e-08 | 5 |