FFCP PHASE1:Hg19::chr20:34042558..34042576,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8200 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4220 | |||
|TSSclassifier=strong | |||
|UniProt=P43026 | |||
|association_with_transcript=0bp_to_ENST00000374372,uc010zvc.1_5end | |||
|description=CAGE_peak_6_at_GDF5_5end | |||
|id=chr20:34042558..34042576,- | |||
|ontology_enrichment_celltype=CL:0002319!1.26e-08!25;CL:0000066!1.53e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.71e-19;1!CL:0000911;2.71e-19;1!CL:0000814;2.71e-19;1!CL:0000123;2.48e-10;2!CL:0000242;2.48e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.91e-19,1;CL:0000914,3.91e-19,1;CL:0000911,3.91e-19,1;CL:0000814,3.91e-19,1;CL:0002042,3.91e-19,1;CL:0002039,3.91e-19,1;CL:0002040,3.91e-19,1;CL:0002041,3.91e-19,1;CL:0000893,2.99e-10,2;CL:0002489,2.99e-10,2;CL:0000809,2.99e-10,2;CL:0000808,2.99e-10,2;CL:0000894,2.99e-10,2;CL:0000806,2.99e-10,2;CL:0000807,2.99e-10,2;CL:0000805,2.99e-10,2;CL:0002425,2.99e-10,2;CL:0000242,3.58e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002425;2.48e-10;2 | |||
|ontology_enrichment_disease=DOID:162!3.91e-14!235;DOID:14566!1.17e-13!239;DOID:305!8.56e-09!106;DOID:0050687!1.05e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.57e-10;2!UBERON:0005058;1.57e-10;2!UBERON:0009113;1.57e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.70e-19,4;UBERON:0005058,4.70e-19,4;UBERON:0009113,4.70e-19,4;UBERON:0003295,4.70e-19,4;UBERON:0005562,4.70e-19,4;UBERON:0003351,4.81e-13,6;UBERON:0004177,2.55e-11,7;UBERON:0005057,2.55e-11,7;UBERON:0000974,3.37e-08,10;UBERON:0003408,3.37e-08,10;UBERON:0001042,3.37e-08,10;UBERON:0009145,3.37e-08,10;UBERON:0006562,1.56e-07,11;UBERON:0009722,1.56e-07,11;UBERON:0007690,1.56e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0.286235987131057,0.547497700291537,0,0,0,0.0787107813136792,0,0,0,0.919421224478927,0,0,0.154934401160603,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0.423863802319124,0.300091096084402,0,0.257640540045629,0.37223371266318,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.882926198829301,0.737930631258681,0,0.109750285408626,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0.394061520403854,0.431255149719035,0.513372145118994,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.483437798366489,0,0.276242966807689,0,0,0,0,0.0770153371044148,0.784349769176855,1.46139224653261,0.105551628892876,1.13733384070897,0,0,0,0,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0.193341436584244,0,0.15350367472613,0,0.644521469209642,0,0.170453254832202,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0.286822704408103,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.28853842595289,0.213425530045242,0.478278818186467,0,0,0,0,0,0.912938716132769,0,0,0.338583555603207,0,0,0,0.687010689511529,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0.242721043499027,0.111443384277478,0,0,0,0.307160702099232,0,0,0.333926115068718,0.16480387422676,0.422250816255987,0,0,0.251932747854276,0.102268682502155,0.369254416383208,0,0.0898683511473268,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0.508507300585533,0,0.344743373241465,0.874813840149763,0.347249989866585,0,0,0,0.110579259931225,0,0,0.10893846351899,0.278847488557207,0,0,0,0.359030577639089,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0.210998064528027,0,0.282706142867882,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0.661983911750998,0,0,0,0,0.173559738335131,0.195984794828755,0.174118413160805,0,0,0,0.365446585430928,0.0821154570532092,0,0,0,0,0.397429223405979,0,0,0.0801588202515337,0,0,0.432271251462318,0,0.514784993585894,0.14405479798815,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,1.16495949527454,0.157566364614447,0.164831716762333,0.471824806979294,0,0.254019996197353,0,0,0.803765742325096,0.687697182986169,1.24632101408756,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0.164185041498678,0.340776043570843,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.592834895693833,0.487170393523584,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0.499921631848426,0,0,0,0.468334905806882,1.01444720027578,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0,0.489473409012935,0.358177682162975,0.617602894321944,0,0.353378291891762,0,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.33946505990805,0.637724760305049,0.619678821295011,0,0,1.02520268501629,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0.596748666348824,0,0.40341013740704,0,0,0.163771917510097,0.147856086217045,0,0,0,0.0634158101939068,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0.345701962667338,0,0,0,0.354581522651905,0.111231401892069,0,0,0.560544326627578,0,0,0,0,0.4740408351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| |||
|short_description=p6@GDF5 | |||
}} |
Revision as of 10:57, 21 January 2014
Short description: | p6@GDF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GDF5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374372, uc010zvc.1_5end |
EntrezGene: | GDF5 |
HGNC: | 4220 |
UniProt: | P43026 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.91e-19 | 1 |
immature NK T cell | 3.91e-19 | 1 |
effector T cell | 3.91e-19 | 1 |
mature NK T cell | 3.91e-19 | 1 |
immature NK T cell stage IV | 3.91e-19 | 1 |
immature NK T cell stage I | 3.91e-19 | 1 |
immature NK T cell stage II | 3.91e-19 | 1 |
immature NK T cell stage III | 3.91e-19 | 1 |
thymocyte | 2.99e-10 | 2 |
double negative thymocyte | 2.99e-10 | 2 |
double-positive, alpha-beta thymocyte | 2.99e-10 | 2 |
DN4 thymocyte | 2.99e-10 | 2 |
DN1 thymic pro-T cell | 2.99e-10 | 2 |
DN2 thymocyte | 2.99e-10 | 2 |
DN3 thymocyte | 2.99e-10 | 2 |
immature single positive thymocyte | 2.99e-10 | 2 |
early T lineage precursor | 2.99e-10 | 2 |
Merkel cell | 3.58e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.70e-19 | 4 |
hemolymphoid system gland | 4.70e-19 | 4 |
thymic region | 4.70e-19 | 4 |
pharyngeal gland | 4.70e-19 | 4 |
thymus primordium | 4.70e-19 | 4 |
pharyngeal epithelium | 4.81e-13 | 6 |
hemopoietic organ | 2.55e-11 | 7 |
immune organ | 2.55e-11 | 7 |
neck | 3.37e-08 | 10 |
gland of gut | 3.37e-08 | 10 |
chordate pharynx | 3.37e-08 | 10 |
pharyngeal region of foregut | 3.37e-08 | 10 |
pharynx | 1.56e-07 | 11 |
entire pharyngeal arch endoderm | 1.56e-07 | 11 |
early pharyngeal endoderm | 1.56e-07 | 11 |