FFCP PHASE1:Hg19::chr20:21686317..21686350,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5075 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8615 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000460221_5end | |||
|coexpression_cluster_id=C1479 | |||
|description=CAGE_peak_1_at_PAX1_5end | |||
|id=chr20:21686317..21686350,+ | |||
|ontology_enrichment_celltype=CL:0002564!8.39e-13!3;CL:0002602!2.45e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0002564;1.07e-24;3!CL:0002602;1.37e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,9.49e-25,3;CL:0002602,1.37e-17,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.85e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002242!8.39e-13!3;UBERON:0003068!8.39e-13!3;UBERON:0002328!8.39e-13!3;UBERON:0004880!8.39e-13!3;UBERON:0001042!4.11e-10!10;UBERON:0009145!4.11e-10!10;UBERON:0009568!2.45e-09!2;UBERON:0002216!2.45e-09!2;UBERON:0002209!2.45e-09!2;UBERON:0002213!2.45e-09!2;UBERON:0004267!2.45e-09!2;UBERON:0006444!2.45e-09!2;UBERON:0001995!2.45e-09!2;UBERON:0004715!2.45e-09!2;UBERON:0001468!2.45e-09!2;UBERON:0001130!2.45e-09!2;UBERON:0001066!2.45e-09!2;UBERON:0000341!3.51e-09!2;UBERON:0008814!3.63e-09!15;UBERON:0006562!3.71e-09!11;UBERON:0003127!2.16e-08!2;UBERON:0005174!8.13e-08!5;UBERON:0001137!8.13e-08!5;UBERON:0000974!9.48e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.85e-40;5!UBERON:0002216;1.85e-40;5!UBERON:0011134;1.85e-40;5!UBERON:0002209;1.85e-40;5!UBERON:0002213;1.85e-40;5!UBERON:0007844;1.85e-40;5!UBERON:0011138;1.85e-40;5!UBERON:0001130;1.85e-40;5!UBERON:0001066;1.85e-40;5!UBERON:0001468;1.85e-40;5!UBERON:0004905;2.76e-25;8!UBERON:0000982;2.76e-25;8!UBERON:0004770;2.76e-25;8!UBERON:0002242;1.07e-24;3!UBERON:0002370;8.34e-18;2!UBERON:0005058;8.34e-18;2!UBERON:0009113;8.34e-18;2!UBERON:0006444;1.37e-17;2!UBERON:0001995;1.37e-17;2!UBERON:0004715;1.37e-17;2!UBERON:0000341;2.99e-17;2!UBERON:0000075;1.37e-12;16!UBERON:0002418;4.85e-12;3!UBERON:0004755;4.85e-12;3!UBERON:0001723;1.39e-11;3!UBERON:0001033;1.39e-11;3!UBERON:0004765;1.01e-10;26!UBERON:0002372;7.97e-10;1!UBERON:0001961;7.97e-10;1!UBERON:0001744;7.97e-10;1!UBERON:0001042;7.97e-10;1!UBERON:0001735;7.97e-10;1!UBERON:0007029;3.98e-09;1!UBERON:0004177;1.20e-07;5!UBERON:0005057;1.20e-07;5!UBERON:0002046;2.85e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.64e-40,5;UBERON:0002216,1.64e-40,5;UBERON:0011134,1.64e-40,5;UBERON:0002209,1.64e-40,5;UBERON:0002213,1.64e-40,5;UBERON:0005856,1.64e-40,5;UBERON:0005866,1.64e-40,5;UBERON:0005863,1.64e-40,5;UBERON:0007844,1.64e-40,5;UBERON:0011138,1.64e-40,5;UBERON:0001130,1.64e-40,5;UBERON:0001066,1.64e-40,5;UBERON:0001468,1.64e-40,5;UBERON:0004905,2.56e-25,8;UBERON:0000982,2.56e-25,8;UBERON:0004770,2.56e-25,8;UBERON:0002242,9.49e-25,3;UBERON:0003068,9.49e-25,3;UBERON:0002328,9.49e-25,3;UBERON:0004880,9.49e-25,3;UBERON:0001042,1.96e-20,10;UBERON:0009145,1.96e-20,10;UBERON:0006562,1.44e-18,11;UBERON:0006444,1.37e-17,2;UBERON:0001995,1.37e-17,2;UBERON:0004715,1.37e-17,2;UBERON:0000341,2.87e-17,2;UBERON:0008814,9.46e-16,18;UBERON:0000974,1.89e-13,10;UBERON:0000075,1.32e-12,16;UBERON:0009722,3.94e-12,11;UBERON:0007690,3.94e-12,11;UBERON:0002418,4.86e-12,3;UBERON:0004755,4.86e-12,3;UBERON:0001723,1.43e-11,3;UBERON:0001033,1.43e-11,3;UBERON:0010056,1.43e-11,3;UBERON:0001557,1.10e-10,19;UBERON:0002372,7.98e-10,1;UBERON:0001961,7.98e-10,1;UBERON:0001744,7.98e-10,1;UBERON:0001735,7.98e-10,1;UBERON:0002370,2.35e-09,4;UBERON:0005058,2.35e-09,4;UBERON:0009113,2.35e-09,4;UBERON:0003295,2.35e-09,4;UBERON:0005562,2.35e-09,4;UBERON:0007029,3.53e-09,1;UBERON:0002046,2.59e-07,5;UBERON:0004117,2.59e-07,5;UBERON:0007689,2.59e-07,5;UBERON:0007123,2.59e-07,5;UBERON:0003091,2.59e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,46.5361487129775,23.1978163009541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.8496817704646,1.50051156317903,2.17012018959788,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,1.05562704063997,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08194319871046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.896436696664224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48830904013189,0.255788742607303,0,0,0,0,0.850299680406731,19.8297222814404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5913297769302,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,1.45713297917742,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0.644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,1.38652688589425,0,0,0,0,0.101988829741982,0,0,0,0,0.267964130156178,0,0,15.1396127149696,3.09483760902862,72.5979346556709,60.8332200099407,0,1.52753179867596,3.03175783437329,1.30630048738177,5.4757328173645,86.7494442827887,0.0717222053926763,2.32862249582209,0,0,0,0,0,0,0.406896178315738,0,22.3413910886039,0 | |||
|short_description=p1@PAX1 | |||
}} |
Revision as of 10:30, 21 January 2014
Short description: | p1@PAX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAX1_5end |
Coexpression cluster: | C1479_tonsil_Nucleus_thymus_Anulus_neuroectodermal_vein_throat |
Association with transcript: | 0bp_to_ENST00000460221_5end |
EntrezGene: | PAX1 |
HGNC: | 8615 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 9.49e-25 | 3 |
annulus pulposus cell | 1.37e-17 | 2 |