FFCP PHASE1:Hg19::chr20:17207711..17207722,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5126 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8744 | |||
|TSSclassifier=strong | |||
|UniProt=B4DFQ3 | |||
|association_with_transcript=10bp_to_ENST00000536609_5end | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_3_at_PCSK2_5end | |||
|id=chr20:17207711..17207722,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.27e-15;82!UBERON:0003056;1.27e-07;3!UBERON:0006215;2.05e-07;3 | |||
|ontology_enrichment_disease=DOID:171!3.56e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;3.08e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.17e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.47e-58!82;UBERON:0007023!4.34e-57!115;UBERON:0005743!2.87e-56!86;UBERON:0001049!1.10e-55!57;UBERON:0005068!1.10e-55!57;UBERON:0006241!1.10e-55!57;UBERON:0007135!1.10e-55!57;UBERON:0000073!1.02e-54!94;UBERON:0001016!1.02e-54!94;UBERON:0002346!1.55e-47!90;UBERON:0002616!1.43e-46!59;UBERON:0000955!2.04e-46!69;UBERON:0006238!2.04e-46!69;UBERON:0002780!6.58e-45!41;UBERON:0001890!6.58e-45!41;UBERON:0006240!6.58e-45!41;UBERON:0003080!1.57e-43!42;UBERON:0003075!1.76e-42!86;UBERON:0007284!1.76e-42!86;UBERON:0001869!1.13e-36!32;UBERON:0002020!2.48e-36!34;UBERON:0003528!2.48e-36!34;UBERON:0001893!2.85e-36!34;UBERON:0002791!7.33e-35!33;UBERON:0000924!1.28e-34!173;UBERON:0006601!1.28e-34!173;UBERON:0002619!2.83e-32!22;UBERON:0003056!4.80e-31!61;UBERON:0004121!8.11e-31!169;UBERON:0001950!7.34e-30!20;UBERON:0000956!1.45e-27!25;UBERON:0000203!1.45e-27!25;UBERON:0000153!8.31e-26!129;UBERON:0007811!8.31e-26!129;UBERON:0000033!1.10e-24!123;UBERON:0003076!6.48e-13!15;UBERON:0003057!6.48e-13!15;UBERON:0000025!1.84e-12!194;UBERON:0001871!7.00e-12!7;UBERON:0004732!4.79e-11!13;UBERON:0002420!2.65e-10!9;UBERON:0007245!2.65e-10!9;UBERON:0010009!2.65e-10!9;UBERON:0010011!2.65e-10!9;UBERON:0000454!2.65e-10!9;UBERON:0002308!4.10e-10!9;UBERON:0000125!4.10e-10!9;UBERON:0001894!5.91e-10!7;UBERON:0006222!5.91e-10!7;UBERON:0004733!5.95e-10!12;UBERON:0002028!5.95e-10!12;UBERON:0007277!5.95e-10!12;UBERON:0000200!8.92e-10!6;UBERON:0004111!1.72e-09!241;UBERON:0001872!1.29e-08!5;UBERON:0002021!1.92e-08!5;UBERON:0000349!5.86e-08!5;UBERON:0009663!9.91e-08!7;UBERON:0000922!1.06e-07!612;UBERON:0000475!1.24e-07!365;UBERON:0000064!1.51e-07!219;UBERON:0000483!1.98e-07!309;UBERON:0000119!3.46e-07!312;UBERON:0000369!4.91e-07!4;UBERON:0002435!4.91e-07!4;UBERON:0000204!4.91e-07!4;UBERON:0010082!4.91e-07!4;UBERON:0000477!5.00e-07!286;UBERON:0002680!5.77e-07!9;UBERON:0001895!5.77e-07!9;UBERON:0010092!5.77e-07!9;UBERON:0000481!7.70e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.96e-53;22!UBERON:0001869;3.09e-52;32!UBERON:0003528;1.37e-50;34!UBERON:0002020;1.37e-50;34!UBERON:0001950;3.34e-49;20!UBERON:0002791;9.45e-49;32!UBERON:0001893;1.28e-46;34!UBERON:0000956;2.64e-46;25!UBERON:0000203;2.64e-46;25!UBERON:0002780;1.81e-43;41!UBERON:0001890;1.81e-43;41!UBERON:0000073;7.44e-37;53!UBERON:0002616;7.44e-37;53!UBERON:0000955;2.36e-30;68!UBERON:0001017;3.21e-27;75!UBERON:0001016;7.95e-25;83!UBERON:0001871;1.05e-16;6!UBERON:0000200;2.11e-15;6!UBERON:0007023;1.48e-13;114!UBERON:0001872;1.76e-13;5!UBERON:0002420;2.86e-13;9!UBERON:0007245;2.86e-13;9!UBERON:0010009;2.86e-13;9!UBERON:0010011;2.86e-13;9!UBERON:0000454;2.86e-13;9!UBERON:0002021;3.77e-13;5!UBERON:0000125;4.93e-13;9!UBERON:0002308;4.93e-13;9!UBERON:0004732;1.07e-12;13!UBERON:0000349;3.33e-12;5!UBERON:0002346;5.01e-11;4!UBERON:0000923;5.01e-11;4!UBERON:0010316;5.01e-11;4!UBERON:0005291;5.01e-11;4!UBERON:0004733;5.14e-11;12!UBERON:0002028;5.14e-11;12!UBERON:0011216;7.86e-11;132!UBERON:0000369;8.95e-11;4!UBERON:0002435;8.95e-11;4!UBERON:0000204;8.95e-11;4!UBERON:0002784;1.94e-10;4!UBERON:0002298;1.65e-09;6!UBERON:0009663;3.35e-09;7!UBERON:0001894;6.62e-09;7!UBERON:0002050;8.37e-09;5!UBERON:0005423;8.37e-09;5!UBERON:0002680;1.09e-08;9!UBERON:0001895;1.09e-08;9!UBERON:0005383;1.43e-08;3!UBERON:0005382;1.43e-08;3!UBERON:0001870;2.03e-08;3!UBERON:0000988;1.27e-07;3!UBERON:0010314;3.89e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.98e-74,56;UBERON:0005068,7.98e-74,56;UBERON:0006241,7.98e-74,56;UBERON:0007135,7.98e-74,56;UBERON:0000073,2.27e-71,53;UBERON:0002616,2.27e-71,53;UBERON:0001017,3.79e-65,81;UBERON:0000955,4.97e-64,68;UBERON:0006238,4.97e-64,68;UBERON:0001016,7.93e-63,89;UBERON:0002346,5.05e-62,86;UBERON:0002780,7.16e-62,41;UBERON:0001890,7.16e-62,41;UBERON:0003080,7.16e-62,41;UBERON:0006240,7.16e-62,41;UBERON:0001869,2.96e-58,32;UBERON:0003528,4.33e-58,34;UBERON:0002020,4.33e-58,34;UBERON:0001893,2.04e-54,34;UBERON:0003075,4.14e-54,82;UBERON:0007284,4.14e-54,82;UBERON:0002791,6.52e-54,32;UBERON:0002619,2.29e-53,22;UBERON:0001950,2.78e-49,20;UBERON:0000956,2.11e-46,25;UBERON:0000203,2.11e-46,25;UBERON:0003056,2.49e-46,61;UBERON:0010371,2.50e-44,104;UBERON:0007023,1.88e-41,114;UBERON:0004121,5.25e-37,171;UBERON:0000924,5.25e-37,171;UBERON:0006601,5.25e-37,171;UBERON:0010314,4.04e-32,132;UBERON:0011216,8.89e-28,223;UBERON:0000025,6.31e-18,192;UBERON:0001871,8.84e-17,6;UBERON:0000200,2.28e-15,6;UBERON:0001872,2.03e-13,5;UBERON:0002420,2.48e-13,9;UBERON:0007245,2.48e-13,9;UBERON:0010009,2.48e-13,9;UBERON:0010011,2.48e-13,9;UBERON:0000454,2.48e-13,9;UBERON:0003076,2.54e-13,15;UBERON:0003057,2.54e-13,15;UBERON:0002021,3.92e-13,5;UBERON:0000125,4.80e-13,9;UBERON:0002308,4.80e-13,9;UBERON:0004732,1.10e-12,13;UBERON:0000349,2.56e-12,5;UBERON:0004111,6.91e-12,240;UBERON:0004733,5.45e-11,12;UBERON:0002028,5.45e-11,12;UBERON:0007277,5.45e-11,12;UBERON:0000369,8.96e-11,4;UBERON:0002435,8.96e-11,4;UBERON:0000204,8.96e-11,4;UBERON:0010082,8.96e-11,4;UBERON:0000483,1.77e-10,306;UBERON:0002784,2.30e-10,4;UBERON:0000119,2.99e-10,309;UBERON:0002298,1.73e-09,6;UBERON:0009663,3.39e-09,7;UBERON:0001894,7.59e-09,7;UBERON:0006222,7.59e-09,7;UBERON:0002680,1.03e-08,9;UBERON:0001895,1.03e-08,9;UBERON:0010092,1.03e-08,9;UBERON:0005383,1.43e-08,3;UBERON:0005382,1.43e-08,3;UBERON:0001870,1.79e-08,3;UBERON:0000988,1.13e-07,3;UBERON:0000923,4.38e-07,560;UBERON:0010316,4.38e-07,560;UBERON:0005291,4.38e-07,560;UBERON:0006598,4.38e-07,560;UBERON:0010317,4.38e-07,560;UBERON:0002532,4.38e-07,560;UBERON:0002050,6.46e-07,564;UBERON:0000922,9.22e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640672166455702,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.811512834825538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,1.54657762555539,0.335032530668698,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95318118213038,4.92342957436795,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,6.78532922266653,4.91670920257812,5.98841394003583,0,0,0,0,0,0,3.44743373241465,7.29011533458136,0.520874984799877,13.2861207872076,6.51220768577203,1.52581736317083,2.32216445855572,4.72876190325676,9.21418668046685,0,0,0.230850775511391,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,1.83309043480088,0.593042257361244,0.617819694732514,0.522109747527277,0.808813595768125,0,6.5594044803095,0,0,0,0,3.62972148145992,3.97894590119637,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.484945082442097,0,2.48578814858586,0,0,6.96418755514666,0,0,0,0,0,0,26.2540346728806,0,0,0,0,0,0.101998217636322,0,7.20504346451747,0.547621515567972,0,0,0,0.279282401272254,0.916641696046735,0,0.599037001496973,0,0,0.134366944973453,0,0,0,0,0,0,0,6.36183751847443,1.90684768556206,0.321506296930038,0.137539436597234,0.415440338029185,0,0,7.89744236554321,0,0.0788057072991982,0.0524545881349981,0,4.66147082265396,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0,0,4.78346938537737,3.43804764530994,0,0,1.17466153824464,0.314408610199332,0,0,0,0,0,0,0,0,0,0,9.74674997963685,7.19954962921583,5.88397374320549,0.573409195690071,1.22021956690538,4.16045899707269,0,0,0,0.856396000634902,0,8.89836321033075,6.66636731609796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0,0.256241518587947,0,0,5.53033744606923,0.584580926518165,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,21.230902150546,0,1.3578602396322,15.3053942473212,27.0179966084625,0.558644917973244,0,0,14.4102734691385,0,0,6.61561018493533,14.1696576325585,6.2257205032289,11.8967491259638,2.7727886584389,9.82032984991894,3.39098855826887,2.85538840518309,0,0,0,0,0,0.690359926060101,0,0.752103283492572,0,1.56302802246618,0,0,0,8.44219807729933,10.15401528198,7.02735108104026,8.05380789462617,7.65764732625507,0.548257766857182,1.48863353516788,12.1351158608138,0,17.6781605839835,10.0885116665647,0.606965604236632,0.91064876540519,0,0,0,2.92269851800376,9.20818829879887,0,0,0.313972371402056,6.75597036638808,0,0.913158720509496,4.10262423315381,0,4.71745191565932,3.00225862292181,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.111855431797792,0,0,0.647428837187895,0,0,0.485710993059139,10.7612153192569,0,0,0,1.42922671769058,1.66059127923341,0.540219106755613,0,81.3648922705435,0.735444965261716,9.66273843116666,2.74831853960923,0.297046400327086,2.9585900930838,0,0,0,0,0,0,0,4.3820183294791,0,0,0,7.13910647004604,8.29066311646717,4.7612415646386,0,0,0,0,0,0.886889507080059,0,0,0,0,0.303114792872958,2.94760543171796,2.48750831837634,2.0686599172379,2.13233981900981,0.952257725854961,0.129177819672012,0,0,20.1125020159001,0.404234377916439,0.217716747896961,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p3@PCSK2 | |||
}} |
Revision as of 10:21, 21 January 2014
Short description: | p3@PCSK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PCSK2_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 10bp_to_ENST00000536609_5end |
EntrezGene: | PCSK2 |
HGNC: | 8744 |
UniProt: | B4DFQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.17e-09 | 10 |