FFCP PHASE1:Hg19::chr2:241079838..241079883,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=150677 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=22644 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NHW6 | |||
|association_with_transcript=-52bp_to_BC105085,BC105087_5end | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_2_at_OTOS_5end | |||
|id=chr2:241079838..241079883,- | |||
|ontology_enrichment_celltype=CL:0000128!7.11e-14!7;CL:0000126!7.11e-14!7;CL:0000127!7.11e-14!7;CL:0002453!7.11e-14!7;CL:0002605!1.57e-12!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.44e-21;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.25e-85!57;UBERON:0005068!1.25e-85!57;UBERON:0006241!1.25e-85!57;UBERON:0007135!1.25e-85!57;UBERON:0002616!1.07e-77!59;UBERON:0000955!1.73e-68!69;UBERON:0006238!1.73e-68!69;UBERON:0005743!1.25e-63!86;UBERON:0001017!1.66e-63!82;UBERON:0002780!1.61e-62!41;UBERON:0001890!1.61e-62!41;UBERON:0006240!1.61e-62!41;UBERON:0003080!6.57e-61!42;UBERON:0001893!1.76e-59!34;UBERON:0001869!6.72e-58!32;UBERON:0003075!1.72e-57!86;UBERON:0007284!1.72e-57!86;UBERON:0000073!6.75e-57!94;UBERON:0001016!6.75e-57!94;UBERON:0002791!2.57e-56!33;UBERON:0002346!1.40e-54!90;UBERON:0002020!2.15e-54!34;UBERON:0003528!2.15e-54!34;UBERON:0000956!2.18e-45!25;UBERON:0000203!2.18e-45!25;UBERON:0000153!4.94e-45!129;UBERON:0007811!4.94e-45!129;UBERON:0003056!1.91e-43!61;UBERON:0000033!2.61e-42!123;UBERON:0007023!4.16e-37!115;UBERON:0002619!1.19e-35!22;UBERON:0001950!4.39e-34!20;UBERON:0004121!5.59e-30!169;UBERON:0000924!4.33e-29!173;UBERON:0006601!4.33e-29!173;UBERON:0004733!3.26e-25!12;UBERON:0002028!3.26e-25!12;UBERON:0007277!3.26e-25!12;UBERON:0003076!1.27e-24!15;UBERON:0003057!1.27e-24!15;UBERON:0004732!3.79e-23!13;UBERON:0000025!8.45e-21!194;UBERON:0001871!1.99e-17!7;UBERON:0000200!1.87e-16!6;UBERON:0004111!3.12e-16!241;UBERON:0000477!1.79e-15!286;UBERON:0002680!6.05e-15!9;UBERON:0001895!6.05e-15!9;UBERON:0010092!6.05e-15!9;UBERON:0001896!3.25e-13!3;UBERON:0005290!3.25e-13!3;UBERON:0010096!3.25e-13!3;UBERON:0002021!4.45e-13!5;UBERON:0000064!7.31e-13!219;UBERON:0000475!1.16e-12!365;UBERON:0000483!1.30e-12!309;UBERON:0002771!1.69e-12!3;UBERON:0002298!2.07e-12!8;UBERON:0000119!2.11e-12!312;UBERON:0002420!8.69e-11!9;UBERON:0007245!8.69e-11!9;UBERON:0010009!8.69e-11!9;UBERON:0010011!8.69e-11!9;UBERON:0000454!8.69e-11!9;UBERON:0002308!9.66e-11!9;UBERON:0000125!9.66e-11!9;UBERON:0002037!1.25e-10!6;UBERON:0006215!1.25e-10!6;UBERON:0000341!7.85e-10!2;UBERON:0000481!1.89e-09!347;UBERON:0000369!2.32e-09!4;UBERON:0002435!2.32e-09!4;UBERON:0000204!2.32e-09!4;UBERON:0010082!2.32e-09!4;UBERON:0009663!3.68e-09!7;UBERON:0000349!1.08e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;2.42e-50;2!UBERON:0001896;1.08e-33;3!UBERON:0005290;1.08e-33;3!UBERON:0002046;5.44e-21;5!UBERON:0000974;1.44e-17;6!UBERON:0002298;2.01e-17;6!UBERON:0000007;1.37e-13;2!UBERON:0004733;3.27e-09;12!UBERON:0002028;3.27e-09;12!UBERON:0004732;1.42e-08;13!UBERON:0003296;1.92e-07;4!UBERON:0010133;1.92e-07;4!UBERON:0002368;5.84e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.42e-50,2;UBERON:0001896,1.08e-33,3;UBERON:0005290,1.08e-33,3;UBERON:0010096,1.08e-33,3;UBERON:0002046,5.44e-21,5;UBERON:0004117,5.44e-21,5;UBERON:0007689,5.44e-21,5;UBERON:0007123,5.44e-21,5;UBERON:0003091,5.44e-21,5;UBERON:0002298,2.01e-17,6;UBERON:0000007,1.21e-13,2;UBERON:0000974,5.98e-11,10;UBERON:0009722,4.22e-10,11;UBERON:0007690,4.22e-10,11;UBERON:0004733,3.27e-09,12;UBERON:0002028,3.27e-09,12;UBERON:0007277,3.27e-09,12;UBERON:0004732,1.42e-08,13;UBERON:0007023,7.01e-08,114;UBERON:0000073,1.01e-07,53;UBERON:0002616,1.01e-07,53;UBERON:0003076,1.49e-07,15;UBERON:0003057,1.49e-07,15;UBERON:0003296,1.80e-07,4;UBERON:0010133,1.80e-07,4;UBERON:0001049,2.47e-07,56;UBERON:0005068,2.47e-07,56;UBERON:0006241,2.47e-07,56;UBERON:0007135,2.47e-07,56;UBERON:0002368,4.48e-07,35;UBERON:0010314,9.02e-07,132 | |||
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|short_description=p2@OTOS | |||
}} |
Revision as of 09:33, 21 January 2014
Short description: | p2@OTOS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OTOS_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | -52bp_to_BC105085, BC105087_5end |
EntrezGene: | OTOS |
HGNC: | 22644 |
UniProt: | Q8NHW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 2.42e-50 | 2 |
medulla oblongata | 1.08e-33 | 3 |
myelencephalon | 1.08e-33 | 3 |
future myelencephalon | 1.08e-33 | 3 |
thyroid gland | 5.44e-21 | 5 |
pharyngeal pouch | 5.44e-21 | 5 |
thyroid diverticulum | 5.44e-21 | 5 |
pharyngeal pouch 2 | 5.44e-21 | 5 |
thyroid primordium | 5.44e-21 | 5 |
brainstem | 2.01e-17 | 6 |
pituitary gland | 1.21e-13 | 2 |
neck | 5.98e-11 | 10 |
entire pharyngeal arch endoderm | 4.22e-10 | 11 |
early pharyngeal endoderm | 4.22e-10 | 11 |
segmental subdivision of hindbrain | 3.27e-09 | 12 |
hindbrain | 3.27e-09 | 12 |
presumptive hindbrain | 3.27e-09 | 12 |
segmental subdivision of nervous system | 1.42e-08 | 13 |
adult organism | 7.01e-08 | 114 |
regional part of nervous system | 1.01e-07 | 53 |
regional part of brain | 1.01e-07 | 53 |
posterior neural tube | 1.49e-07 | 15 |
chordal neural plate | 1.49e-07 | 15 |
gland of diencephalon | 1.80e-07 | 4 |
neuroendocrine gland | 1.80e-07 | 4 |
neural tube | 2.47e-07 | 56 |
neural rod | 2.47e-07 | 56 |
future spinal cord | 2.47e-07 | 56 |
neural keel | 2.47e-07 | 56 |
endocrine gland | 4.48e-07 | 35 |
structure with developmental contribution from neural crest | 9.02e-07 | 132 |