FFCP PHASE1:Hg19::chr2:233243233..233243245,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=250 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=439 | |||
|TSSclassifier=strong | |||
|UniProt=P05187 | |||
|association_with_transcript=0bp_to_ENST00000392027_5end | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_5_at_ALPP_5end | |||
|id=chr2:233243233..233243245,+ | |||
|ontology_enrichment_celltype=CL:0002541!9.72e-10!3;CL:0000066!4.80e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.55e-50;29!UBERON:0006595;1.56e-07;86 | |||
|ontology_enrichment_disease=DOID:305!2.18e-14!106;DOID:4929!1.99e-13!2;DOID:0050687!3.89e-11!143;DOID:162!4.92e-07!235;DOID:14566!8.30e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.76e-13,106;DOID:0050687,1.09e-09,143;DOID:162,5.67e-07,235;DOID:14566,8.24e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.02e-59!9;UBERON:0001557!1.52e-27!19;UBERON:0005631!3.93e-16!14;UBERON:0000158!3.93e-16!14;UBERON:0008947!5.55e-16!38;UBERON:0003258!5.55e-16!38;UBERON:0003124!3.79e-15!7;UBERON:0000072!6.78e-13!46;UBERON:0000065!5.86e-11!53;UBERON:0000476!9.72e-10!3;UBERON:0000920!9.72e-10!3;UBERON:0000478!3.41e-09!24;UBERON:0001041!7.58e-09!98;UBERON:0000077!2.23e-08!130;UBERON:0000064!6.55e-08!219;UBERON:0004913!1.11e-07!1;UBERON:0003703!1.11e-07!1;UBERON:0001174!1.11e-07!1;UBERON:0004914!1.11e-07!1;UBERON:0001004!1.32e-07!72;UBERON:0001987!2.06e-07!4;UBERON:0004340!2.06e-07!4;UBERON:0002394!3.66e-07!4;UBERON:0003928!3.66e-07!4;UBERON:0004921!3.85e-07!129;UBERON:0004185!3.85e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.23e-160;9!UBERON:0001557;1.23e-160;9!UBERON:0000072;4.03e-36;37!UBERON:0000065;1.89e-30;44!UBERON:0001004;6.05e-16;65!UBERON:0003124;3.25e-07;3!UBERON:0000920;3.25e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.23e-160,9;UBERON:0001557,4.83e-76,19;UBERON:0008947,6.78e-38,38;UBERON:0003258,6.78e-38,38;UBERON:0000072,1.43e-30,47;UBERON:0000065,1.47e-26,54;UBERON:0001004,2.93e-19,74;UBERON:0001041,2.63e-16,87;UBERON:0004921,9.07e-12,118;UBERON:0001007,1.78e-09,145;UBERON:0001555,1.78e-09,145;UBERON:0007026,1.78e-09,145;UBERON:0001048,1.38e-08,160;UBERON:0004119,1.58e-08,160;UBERON:0000925,1.58e-08,160;UBERON:0006595,1.58e-08,160;UBERON:0000920,3.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.8082488026297,7.75489574359268,6.26628677697053,4.85293480022533,4.35758888184812,3.08451804844426,6.33707148352773,4.70931516300831,2.69323009862473,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0.638002319463839,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783532859223623,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,1.0362910251936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p5@ALPP | |||
}} |
Revision as of 09:13, 21 January 2014
Short description: | p5@ALPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ALPP_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 0bp_to_ENST00000392027_5end |
EntrezGene: | ALPP |
HGNC: | 439 |
UniProt: | P05187 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.23e-160 | 9 |
upper respiratory tract | 4.83e-76 | 19 |
respiratory primordium | 6.78e-38 | 38 |
endoderm of foregut | 6.78e-38 | 38 |
segment of respiratory tract | 1.43e-30 | 47 |
respiratory tract | 1.47e-26 | 54 |
respiratory system | 2.93e-19 | 74 |
foregut | 2.63e-16 | 87 |
subdivision of digestive tract | 9.07e-12 | 118 |
digestive system | 1.78e-09 | 145 |
digestive tract | 1.78e-09 | 145 |
primitive gut | 1.78e-09 | 145 |
primordium | 1.38e-08 | 160 |
endoderm-derived structure | 1.58e-08 | 160 |
endoderm | 1.58e-08 | 160 |
presumptive endoderm | 1.58e-08 | 160 |
egg chorion | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.76e-13 | 106 |
cell type cancer | 1.09e-09 | 143 |
cancer | 5.67e-07 | 235 |
disease of cellular proliferation | 8.24e-07 | 239 |