FFCP PHASE1:Hg19::chr2:216274684..216274712,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_ENST00000471193_5end | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_37_at_FN1_5end | |||
|id=chr2:216274684..216274712,- | |||
|ontology_enrichment_celltype=CL:0000055!1.19e-34!180;CL:0000057!4.34e-24!75;CL:0000680!5.08e-14!57;CL:0000056!5.08e-14!57;CL:0000355!5.08e-14!57;CL:0002371!5.66e-14!591;CL:0000183!1.61e-13!59;CL:0000187!1.28e-12!54;CL:0000144!2.80e-11!625;CL:0000220!1.25e-10!246;CL:0000393!1.33e-10!60;CL:0000211!1.33e-10!60;CL:0002321!2.26e-10!248;CL:0002620!1.99e-09!23;CL:0000222!2.94e-09!119;CL:0000192!5.87e-09!42;CL:0000514!5.87e-09!42;CL:0000048!1.48e-08!430;CL:0000723!5.08e-08!436;CL:0002494!8.95e-08!16;CL:0000034!1.69e-07!444;CL:0002334!1.74e-07!12;CL:0000359!3.13e-07!32;CL:0000548!7.10e-07!679;CL:0000004!7.10e-07!679;CL:0000255!7.10e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000134;2.88e-11;55!CL:0000057;9.39e-11;73!CL:0000723;1.30e-10;61!CL:0002620;8.38e-10;23!CL:0000048;1.18e-09;58!CL:0002320;2.25e-09;188!CL:0000187;1.89e-08;55!CL:0002334;1.92e-08;12!CL:0002494;3.39e-08;16!CL:0000034;4.21e-08;69!CL:0000359;1.14e-07;32!CL:0000192;2.19e-07;43!CL:0000499;4.17e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.75e-27,76;CL:0000048,7.14e-18,427;CL:0000723,4.12e-17,433;CL:0000680,8.06e-16,58;CL:0000056,8.06e-16,58;CL:0000355,8.06e-16,58;CL:0000034,1.19e-15,441;CL:0000187,3.41e-14,55;CL:0000393,3.13e-11,61;CL:0000211,3.13e-11,61;CL:0000192,8.25e-10,43;CL:0000514,8.25e-10,43;CL:0002620,8.43e-10,23;CL:0002320,1.38e-08,361;CL:0002334,1.62e-08,12;CL:0000222,2.22e-08,121;CL:0002494,4.06e-08,16;CL:0000359,5.75e-08,32;CL:0000134,3.73e-07,354;CL:0002321,4.79e-07,250;CL:0000499,5.58e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;5.87e-09;58!CL:0000514;2.19e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.00e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.60e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.53e-16!83;UBERON:0002329!1.53e-16!83;UBERON:0003077!1.53e-16!83;UBERON:0003059!1.53e-16!83;UBERON:0007282!1.53e-16!83;UBERON:0009618!1.53e-16!83;UBERON:0007285!1.53e-16!83;UBERON:0005256!2.82e-16!143;UBERON:0004290!2.80e-15!70;UBERON:0000486!7.72e-14!82;UBERON:0001134!1.37e-12!61;UBERON:0002036!1.37e-12!61;UBERON:0003082!1.37e-12!61;UBERON:0002385!1.59e-12!63;UBERON:0001015!1.59e-12!63;UBERON:0000383!1.59e-12!63;UBERON:0003914!5.30e-12!118;UBERON:0002100!4.11e-11!216;UBERON:0004872!7.43e-11!84;UBERON:0002049!1.91e-10!79;UBERON:0007798!1.91e-10!79;UBERON:0000490!4.36e-10!138;UBERON:0000475!2.26e-09!365;UBERON:0004535!2.65e-09!110;UBERON:0002199!3.19e-09!45;UBERON:0002416!3.19e-09!45;UBERON:0001009!5.45e-09!113;UBERON:0000468!7.06e-09!659;UBERON:0000119!2.96e-08!312;UBERON:0001637!4.03e-08!42;UBERON:0003509!4.03e-08!42;UBERON:0004572!4.03e-08!42;UBERON:0003102!4.50e-08!95;UBERON:0000483!6.76e-08!309;UBERON:0002097!1.04e-07!40;UBERON:0000055!1.18e-07!69;UBERON:0000948!1.73e-07!24;UBERON:0005498!1.73e-07!24;UBERON:0004140!1.73e-07!24;UBERON:0009881!1.73e-07!24;UBERON:0004141!1.73e-07!24;UBERON:0003084!1.73e-07!24;UBERON:0007005!1.73e-07!24;UBERON:0004139!1.73e-07!24;UBERON:0004291!1.73e-07!24;UBERON:0001013!3.76e-07!14;UBERON:0004573!6.57e-07!33;UBERON:0004571!6.57e-07!33;UBERON:0001981!6.58e-07!60;UBERON:0007500!6.58e-07!60;UBERON:0004537!6.58e-07!60;UBERON:0006965!6.58e-07!60;UBERON:0003104!8.86e-07!238;UBERON:0009142!8.86e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;4.32e-09;198!UBERON:0001013;1.48e-07;14!UBERON:0000948;3.38e-07;22!UBERON:0002199;6.13e-07;46!UBERON:0002416;6.13e-07;46!UBERON:0002097;7.98e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,8.14e-17,78;UBERON:0007524,2.41e-16,73;UBERON:0002329,2.67e-16,71;UBERON:0003059,2.67e-16,71;UBERON:0007282,2.67e-16,71;UBERON:0004290,2.67e-16,71;UBERON:0009618,2.67e-16,71;UBERON:0003077,8.68e-16,72;UBERON:0007285,8.68e-16,72;UBERON:0005256,4.82e-15,122;UBERON:0003104,8.68e-15,160;UBERON:0009142,8.68e-15,160;UBERON:0000486,9.96e-14,83;UBERON:0001134,1.17e-13,62;UBERON:0002036,1.17e-13,62;UBERON:0003082,1.17e-13,62;UBERON:0002385,2.75e-13,64;UBERON:0001015,2.75e-13,64;UBERON:0000383,2.75e-13,64;UBERON:0004872,1.88e-10,83;UBERON:0000490,2.47e-10,148;UBERON:0002199,2.59e-10,46;UBERON:0002416,2.59e-10,46;UBERON:0003914,4.92e-10,117;UBERON:0002384,2.09e-09,371;UBERON:0003102,4.07e-09,99;UBERON:0000926,5.37e-09,315;UBERON:0004120,5.37e-09,315;UBERON:0006603,5.37e-09,315;UBERON:0004535,1.05e-08,109;UBERON:0002049,1.19e-08,78;UBERON:0007798,1.19e-08,78;UBERON:0002097,1.46e-08,41;UBERON:0002100,3.58e-08,199;UBERON:0001637,4.85e-08,42;UBERON:0003509,4.85e-08,42;UBERON:0004572,4.85e-08,42;UBERON:0001009,5.50e-08,112;UBERON:0004923,7.74e-08,66;UBERON:0000948,9.24e-08,24;UBERON:0005498,9.24e-08,24;UBERON:0004140,9.24e-08,24;UBERON:0009881,9.24e-08,24;UBERON:0004141,9.24e-08,24;UBERON:0003084,9.24e-08,24;UBERON:0007005,9.24e-08,24;UBERON:0004139,9.24e-08,24;UBERON:0004291,9.24e-08,24;UBERON:0001013,1.95e-07,14 | |||
|phase1_expression=15.6243406172679,31.4727770119745,11.9811243481575,26.0190575718139,10.7270662662549,24.4254786748103,12.6649939084155,4.42203911398782,1.04474251279935,0.245733936501509,2.09340350391728,6.11635841964482,10.5506791291381,2.10402800032079,4.97096063591874,6.05092631806598,5.42425075221579,8.03341099426111,3.90346239032406,0.861847406537515,1.63200552995402,2.82109249330279,0.286235987131057,0.410623275218653,2.13422487311165,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.0181972204677,10.0605128955545,2.17366355134002,5.42158728576849,2.50668955317945,3.0417768981773,42.1501551937083,127.498336019291,0.756278537312543,3.54767035940102,2.54720878510066,0.196468613246569,0,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,3.95715559346807,3.77549492588915,1.37559020970034,0,0.775250277507987,1.42306505074684,2.34304428935269,0,0,0.24406205754817,0,7.29127753093584,0.803697554556718,0,0,1.53316637465883,0,1.46561395144326,0,0,0.436094052142534,29.3213451500238,10.7635934914893,24.8929259928851,54.7857945630234,11.3493882303474,8.97084160227691,4.2699598291882,14.0600502597781,12.7596524513904,9.29503637280848,7.68270944633256,18.7683210279715,14.98057403648,0.70296429550139,10.3012825354006,0.570471821544449,8.81747215255626,3.40560046066918,3.39933183173076,3.37081936085396,3.87892925384297,2.45668634623536,3.51307655997603,1.18800285728205,3.4617370098998,7.28129089550421,2.87447256726495,1.34668891163253,4.25402967564678,2.77064115484183,2.19488810440419,5.21029252858333,3.60571341375832,1.70148274740032,31.3931862455508,6.19316427573846,14.6233011800098,28.5086541280182,6.18315175430633,29.1133810251561,5.76962254627928,10.6329089311998,9.64626351095866,39.8845363305701,9.11293996558764,7.43571861366535,33.7259112890784,3.02256294682921,2.88253006927829,1.15956511897978,1.90922284413584,0,0.121973706129595,0,0.232387885739037,0.414644220061482,0.756962552626885,0,4.69348596989448,7.71889125831462,4.14404764057442,18.1103491932472,8.66255378003503,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,2.80483547606892,5.3504621473082,4.41026134156626,6.33775174109154,5.89696330006576,1.18157981336281,0,1.59884970106048,0.686271241194102,1.86575485194663,0,0.100528972411631,0,1.3032332212413,1.03993478527958,2.88662684050547,0,4.93116515790451,0.866198686566443,3.24089858803628,1.14152491340759,0,0,0,0,0,0,2.51973192298289,0.141775097242386,5.3735113621709,1.45316969256981,3.06706143332169,0,0,0,0,0.12624243342638,0.063497894292169,0.381988425558278,0,1.71072446022705,1.43958489784653,0.300343057843917,0,3.36393253036082,1.74384027533312,1.39342743059805,3.36106460970222,14.3062578340753,10.988935783228,2.6593811658487,0,2.82928111688356,5.67396528093113,4.79559922228979,1.28680194292333,5.42621605391443,5.76268235746538,0.65147236858747,0.355391948742546,0.791951872933429,0.904318131178758,0,0.299918973546171,0,0,0,10.7831184971212,11.4861935834114,0,9.41078493339265,14.3833425785268,6.26713371339634,0.112085143993527,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,3.31267027641678,9.00306937907419,5.15403545029498,16.8456397839954,23.5526265212254,9.61984731707001,6.79420206957737,2.10662269809403,4.5481500811197,16.5556914068008,5.31380478828349,5.7154442247928,2.17209036170207,5.286631251494,9.26487244289311,0,0,0,0.303127571446259,8.32177197552485,6.65258645325297,31.0134759773471,29.0043129514438,38.4504329373311,13.8390281196157,12.2809739776009,22.3586950389614,16.325987308949,4.93471020168498,8.16783936440384,2.87445046048332,2.59627214591811,4.41599438147845,1.20859449591622,11.6293752775905,0,1.03333003348146,4.55227920016793,2.62248829918848,2.25599806453706,0.385076685522074,0,0,1.16106791782163,1.13733384070897,0.680374821106063,2.59099099322567,4.62681758070868,1.89662506280697,1.00337954770971,0.254876273045038,0,1.34324852833307,0,0,0,0,0.650756789328606,1.64865618636356,0,0,2.29706215198469,1.30012049207304,1.6068392984416,2.80345083047154,6.932187770159,9.51722783302003,3.85942402956686,12.3533281598515,17.111969881879,8.18175623194569,3.38321735457602,4.95854746082934,7.11103249250893,8.55005173713714,6.57525575561074,2.78907329578371,68.6290916090795,2.0911118104818,1.84820148105653,1.06461206063404,0,2.40921484835096,1.43124886741991,4.09374206295634,6.64396791909324,5.14701523594327,0.511795582622668,2.99557291623744,1.59101623962968,7.8494864019923,2.69808686374972,3.0199073270966,2.82749765629647,1.41527737101321,6.34041284692033,0.842516912477962,1.46290121726877,2.19342140668156,0,2.04749867111979,3.39373036688911,10.1707304958219,2.2054613741845,3.3171948762061,2.63070531152258,7.52408194546694,3.9353685122798,2.84074527747786,1.8589409885985,2.53526042279017,1.72093622644862,2.161478902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| |||
|short_description=p37@FN1 | |||
}} |
Revision as of 08:25, 21 January 2014
Short description: | p37@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | -11bp_to_ENST00000471193_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.75e-27 | 76 |
multi fate stem cell | 7.14e-18 | 427 |
somatic stem cell | 4.12e-17 | 433 |
muscle precursor cell | 8.06e-16 | 58 |
myoblast | 8.06e-16 | 58 |
multi-potent skeletal muscle stem cell | 8.06e-16 | 58 |
stem cell | 1.19e-15 | 441 |
muscle cell | 3.41e-14 | 55 |
electrically responsive cell | 3.13e-11 | 61 |
electrically active cell | 3.13e-11 | 61 |
smooth muscle cell | 8.25e-10 | 43 |
smooth muscle myoblast | 8.25e-10 | 43 |
skin fibroblast | 8.43e-10 | 23 |
connective tissue cell | 1.38e-08 | 361 |
preadipocyte | 1.62e-08 | 12 |
mesodermal cell | 2.22e-08 | 121 |
cardiocyte | 4.06e-08 | 16 |
vascular associated smooth muscle cell | 5.75e-08 | 32 |
mesenchymal cell | 3.73e-07 | 354 |
embryonic cell | 4.79e-07 | 250 |
stromal cell | 5.58e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.60e-07 | 14 |