FFCP PHASE1:Hg19::chr2:216257915..216257929,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010zjp.1_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_61_at_FN1_5end | |||
|id=chr2:216257915..216257929,- | |||
|ontology_enrichment_celltype=CL:0000055!5.91e-33!180;CL:0000057!3.65e-24!75;CL:0000183!2.41e-16!59;CL:0002371!1.01e-15!591;CL:0000680!2.37e-15!57;CL:0000056!2.37e-15!57;CL:0000355!2.37e-15!57;CL:0000187!4.39e-15!54;CL:0000144!1.33e-13!625;CL:0000048!2.86e-13!430;CL:0000034!4.20e-13!444;CL:0000393!5.57e-13!60;CL:0000211!5.57e-13!60;CL:0000723!9.15e-13!436;CL:0002620!4.70e-10!23;CL:0000548!1.34e-09!679;CL:0000004!1.34e-09!679;CL:0000255!1.34e-09!679;CL:0000012!2.83e-09!682;CL:0000192!1.15e-08!42;CL:0000514!1.15e-08!42;CL:0000499!2.64e-07!27;CL:0000359!6.48e-07!32;CL:0002334!8.44e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.19e-15;19!CL:0000188;3.82e-11;9!CL:1000306;7.87e-10;4!CL:0002547;7.87e-10;4!CL:0002541;3.53e-08;3!CL:0000746;7.48e-08;3!CL:0000594;1.11e-07;3!CL:0000723;1.16e-07;61!CL:0000057;1.91e-07;73!CL:0000632;3.17e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.42e-15,76;CL:0000349,4.96e-15,19;CL:0000188,5.21e-11,9;CL:1000306,7.45e-10,4;CL:0002547,7.45e-10,4;CL:0000048,1.09e-09,427;CL:0000723,2.53e-09,433;CL:0000034,7.50e-09,441;CL:0002541,4.97e-08,3;CL:0000746,5.72e-08,3;CL:0000513,5.72e-08,3;CL:0000680,7.67e-08,58;CL:0000056,7.67e-08,58;CL:0000355,7.67e-08,58;CL:0000594,7.73e-08,3;CL:0000187,1.61e-07,55;CL:0000632,2.63e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000513;7.48e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.14e-07;5!DOID:450;1.14e-07;5!DOID:66;1.14e-07;5!DOID:423;1.14e-07;5!DOID:0080000;1.14e-07;5!DOID:11722;1.14e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.17e-08,5;DOID:450,9.17e-08,5;DOID:66,9.17e-08,5;DOID:423,9.17e-08,5;DOID:0080000,9.17e-08,5;DOID:11722,9.17e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.22e-19!83;UBERON:0002329!1.22e-19!83;UBERON:0003077!1.22e-19!83;UBERON:0003059!1.22e-19!83;UBERON:0007282!1.22e-19!83;UBERON:0009618!1.22e-19!83;UBERON:0007285!1.22e-19!83;UBERON:0004290!3.91e-17!70;UBERON:0000486!5.05e-15!82;UBERON:0001134!2.35e-14!61;UBERON:0002036!2.35e-14!61;UBERON:0003082!2.35e-14!61;UBERON:0002385!3.74e-14!63;UBERON:0001015!3.74e-14!63;UBERON:0000383!3.74e-14!63;UBERON:0005256!2.39e-13!143;UBERON:0004872!7.94e-09!84;UBERON:0005631!1.05e-08!14;UBERON:0000158!1.05e-08!14;UBERON:0003102!1.07e-07!95;UBERON:0000490!6.99e-07!138;UBERON:0003124!7.32e-07!7;UBERON:0002097!8.39e-07!40;UBERON:0004923!9.41e-07!57;UBERON:0002199!9.74e-07!45;UBERON:0002416!9.74e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;8.54e-14;10!UBERON:0000158;8.54e-14;10!UBERON:0000478;1.98e-11;24!UBERON:0004797;7.87e-10;4!UBERON:0000415;7.87e-10;4!UBERON:0007240;7.87e-10;4!UBERON:0005742;7.87e-10;4!UBERON:0005734;7.87e-10;4!UBERON:0004664;7.87e-10;4!UBERON:0004663;7.87e-10;4!UBERON:0003124;3.53e-08;3!UBERON:0000920;3.53e-08;3!UBERON:0000305;7.36e-08;7!UBERON:0001134;1.79e-07;16!UBERON:0002036;1.79e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.58e-15,14;UBERON:0000158,5.58e-15,14;UBERON:0000478,2.76e-11,24;UBERON:0000415,7.45e-10,4;UBERON:0007240,7.45e-10,4;UBERON:0005742,7.45e-10,4;UBERON:0005734,7.45e-10,4;UBERON:0004664,7.45e-10,4;UBERON:0004663,7.45e-10,4;UBERON:0003124,8.23e-09,7;UBERON:0007524,9.35e-09,73;UBERON:0002329,3.58e-08,71;UBERON:0003059,3.58e-08,71;UBERON:0007282,3.58e-08,71;UBERON:0004290,3.58e-08,71;UBERON:0009618,3.58e-08,71;UBERON:0000920,4.97e-08,3;UBERON:0003077,5.44e-08,72;UBERON:0007285,5.44e-08,72;UBERON:0000305,8.26e-08,7;UBERON:0001134,4.55e-07,62;UBERON:0002036,4.55e-07,62;UBERON:0003082,4.55e-07,62;UBERON:0007503,5.28e-07,78;UBERON:0004871,8.81e-07,8 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,1.74467704820074,0,0,0,0,0,3.27662058195258,1.58260186937072,0.74259811776028,1.32558950291166,0.672325146451775,0.602694528023977,1.46062018077475,0.487932798790507,0,0.204000691244253,0.940364164434263,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,2.68280343881454,1.40648818027883,0,0,0.289693037921647,5.5670016293577,8.27279279514481,0.0945348171640679,0.443458794925128,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,1.49091585508596,2.15271869829786,1.45650098894541,4.01571269048339,2.4826786753885,0.560677600142307,0,1.48000529050296,0.622422070799533,0.808264032418128,0.653847612453835,2.4217188423189,4.03323147135999,0.234321431833797,0.936480230490962,0,0.896692083310806,0.704606991862589,1.13311061057692,0.421352420106746,0,0.859840221182376,0.309977343527296,0,0.741800787835671,0.910161361938026,0,1.0100166837244,0.875829639103749,0,0.438977620880838,0.612975591598039,0.600952235626387,1.13432183160021,3.40840307808838,1.70845911054854,4.87443372666992,0.600182192168805,1.13357782162283,0.515281080091258,0,1.0126579934476,0.389748020644795,1.7670364197088,0.368199594569197,0.323292113637624,1.77504796258307,0.403008392910561,0.67824236924195,0,0.272746120590835,0,0.121973706129595,0,0.348581828608555,0.310983165046111,0.252320850875628,0,0,1.28648187638577,1.38134921352481,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,1.47008711385542,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0,0,2.07986957055916,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.985143749731331,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.336393253036082,2.61576041299968,0.7333828582095,0.129271715757778,0,2.535908257668,0,1.04007436911366,0.771622122786426,4.25547396069835,0.532844358032199,0.57191197463259,1.08524321078289,2.46972101034231,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,1.02738161275192,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.981531933753119,0,0.271265023699736,2.70362119990049,3.56857977594324,0.315404830067869,0.819989904948992,0.300946099727719,0,5.17365356462525,0.664225598535437,0.184369168541703,1.04260337361699,1.37060810223918,0.686286847621712,0,0,0,0.303127571446259,4.99306318531491,3.62868351995616,0.496215615637554,0.306923946576125,1.68396056659844,0,0.511707249066704,1.28683136914886,1.48418066444991,1.07946785661859,1.06537035187876,0.657017248110473,1.03850885836724,0.464841513839837,0.120859449591622,2.00506470303285,0,0.918515585316854,1.0925470080403,0.524497659837696,0,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,1.35339005608971,1.23238893691716,1.07452572308291,1.10269257987624,3.33002759091648,2.32026710262766,1.70453254832202,0.890320356467374,0.330569830721956,0,0.893288987462089,0,0,5.66662224295152,0.6970372701606,0,0,0.869932992075073,0.55597265731176,0.143124886741991,1.116475108079,0.949138274156178,0.190630193923825,0,0.42793898803392,0.636406495851874,1.56989728039846,0.539617372749944,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0.545999645631943,0.848432591722276,1.13008116620243,0.551365343546124,0.66343897524122,0,0.578775534266688,2.62357900818653,0.405820753925408,0.6196469961995,0,0.717056761020258,0.785992328104969,2.1400263088875,0,0.211107635297664,0.987884678879706,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,0,1.22864280839693,0,0,5.78805266119111,0,0,0.597743964753209,0,0,0,0,4.0435146396035,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,15.6310568268641,1.09917112082235,57.0347210339939,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.558564802544508,0,0,0.199679000498991,0,0,0,1.44119953416961,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0,2.3854323049959,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.895528817321244,4.44055288709727,0.554805861502613,1.13641803165053,2.26411111577318,0.889811221596536,0.457680136793847,1.81477108515887,0.466311601748341,0,0.63718706865481,0.899606224327209,0.776314784381297,0.829412415681711,2.12673371646396,0.521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| |||
|short_description=p61@FN1 | |||
}} |
Revision as of 08:22, 21 January 2014
Short description: | p61@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_61_at_FN1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_uc010zjp.1_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.42e-15 | 76 |
extraembryonic cell | 4.96e-15 | 19 |
cell of skeletal muscle | 5.21e-11 | 9 |
fibroblast of tunica adventitia of artery | 7.45e-10 | 4 |
fibroblast of the aortic adventitia | 7.45e-10 | 4 |
multi fate stem cell | 1.09e-09 | 427 |
somatic stem cell | 2.53e-09 | 433 |
stem cell | 7.50e-09 | 441 |
chorionic membrane mesenchymal stem cell | 4.97e-08 | 3 |
cardiac muscle cell | 5.72e-08 | 3 |
cardiac muscle myoblast | 5.72e-08 | 3 |
muscle precursor cell | 7.67e-08 | 58 |
myoblast | 7.67e-08 | 58 |
multi-potent skeletal muscle stem cell | 7.67e-08 | 58 |
skeletal muscle satellite cell | 7.73e-08 | 3 |
muscle cell | 1.61e-07 | 55 |
hepatic stellate cell | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.58e-15 | 14 |
membranous layer | 5.58e-15 | 14 |
extraembryonic structure | 2.76e-11 | 24 |
artery wall | 7.45e-10 | 4 |
tunica adventitia of artery | 7.45e-10 | 4 |
adventitia | 7.45e-10 | 4 |
tunica adventitia of blood vessel | 7.45e-10 | 4 |
aorta tunica adventitia | 7.45e-10 | 4 |
aorta wall | 7.45e-10 | 4 |
chorion | 8.23e-09 | 7 |
dense mesenchyme tissue | 9.35e-09 | 73 |
somite | 3.58e-08 | 71 |
presomitic mesoderm | 3.58e-08 | 71 |
presumptive segmental plate | 3.58e-08 | 71 |
dermomyotome | 3.58e-08 | 71 |
trunk paraxial mesoderm | 3.58e-08 | 71 |
egg chorion | 4.97e-08 | 3 |
paraxial mesoderm | 5.44e-08 | 72 |
presumptive paraxial mesoderm | 5.44e-08 | 72 |
amnion | 8.26e-08 | 7 |
skeletal muscle tissue | 4.55e-07 | 62 |
striated muscle tissue | 4.55e-07 | 62 |
myotome | 4.55e-07 | 62 |
epithelial vesicle | 5.28e-07 | 78 |
somatic layer of lateral plate mesoderm | 8.81e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.17e-08 | 5 |
myotonic disease | 9.17e-08 | 5 |
muscle tissue disease | 9.17e-08 | 5 |
myopathy | 9.17e-08 | 5 |
muscular disease | 9.17e-08 | 5 |
myotonic dystrophy | 9.17e-08 | 5 |