FFCP PHASE1:Hg19::chr2:113982484..113982512,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1493 | |||
|description=CAGE_peak_at_chr2:113982484..113982512,- | |||
|id=chr2:113982484..113982512,- | |||
|ontology_enrichment_celltype=CL:1000497!1.09e-09!18;CL:0002518!1.09e-09!18;CL:1000507!1.07e-08!12;CL:1000494!1.07e-08!12;CL:1000449!1.92e-07!16;CL:0002149!2.96e-07!6;CL:0002255!2.96e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002149;1.08e-21;6!CL:0002255;1.08e-21;6!CL:1000497;4.90e-17;17!CL:0002518;4.90e-17;17!CL:1000507;1.22e-16;10!CL:1000494;1.22e-16;10!CL:0000159;3.42e-11;2!CL:1000449;6.52e-11;15!CL:0000239;2.27e-07;3!CL:1000615;2.27e-07;3!CL:0002306;2.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.15e-21,6;CL:0002255,1.15e-21,6;CL:1000497,4.44e-17,17;CL:0002518,4.44e-17,17;CL:1000507,1.09e-16,10;CL:1000494,1.09e-16,10;CL:0000159,3.17e-11,2;CL:1000449,6.06e-11,15;CL:0000239,2.35e-07,3;CL:1000615,2.35e-07,3;CL:0002306,2.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;7.65e-17;5!UBERON:0005795;1.25e-12;10!UBERON:0003918;2.18e-12;10!UBERON:0007687;2.18e-12;10!UBERON:0007297;3.79e-11;2 | |||
|ontology_enrichment_disease=DOID:120!1.56e-12!27;DOID:193!2.71e-11!29;DOID:299!4.45e-11!25;DOID:3001!2.96e-07!6;DOID:2394!6.53e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3001;1.08e-21;6!DOID:120;4.14e-17;27!DOID:193;8.51e-16;29!DOID:299;2.96e-15;25!DOID:4468;1.72e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.15e-21,6;DOID:120,3.93e-17,27;DOID:193,8.11e-16,29;DOID:299,2.96e-15,25;DOID:4468,1.72e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000489!1.75e-13!32;UBERON:0000058!4.64e-12!26;UBERON:0002113!8.68e-11!27;UBERON:0003918!8.68e-11!27;UBERON:0005095!8.68e-11!27;UBERON:0007687!8.68e-11!27;UBERON:0000080!1.16e-09!18;UBERON:0002120!1.16e-09!18;UBERON:0004875!1.16e-09!18;UBERON:0005721!1.16e-09!18;UBERON:0005754!1.16e-09!18;UBERON:0007297!1.16e-09!18;UBERON:0009773!1.07e-08!12;UBERON:0001231!1.07e-08!12;UBERON:0004810!1.07e-08!12;UBERON:0001008!1.25e-08!45;UBERON:0003886!1.41e-08!63;UBERON:0006555!1.52e-08!17;UBERON:0005103!1.52e-08!17;UBERON:0000083!1.52e-08!17;UBERON:0009201!1.52e-08!17;UBERON:0004819!1.52e-08!17;UBERON:0006553!1.52e-08!17;UBERON:0003074!1.52e-08!17;UBERON:0003060!1.52e-08!17;UBERON:0004876!2.34e-08!20;UBERON:0006554!6.33e-08!44;UBERON:0003887!8.42e-08!21;UBERON:0002553!1.09e-07!70;UBERON:0004211!1.92e-07!16;UBERON:0001285!1.92e-07!16;UBERON:0007684!1.92e-07!16;UBERON:0003220!1.92e-07!16;UBERON:0004208!1.92e-07!16;UBERON:0003103!7.07e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.23e-18;24!UBERON:0011143;2.23e-18;24!UBERON:0002046;7.65e-17;5!UBERON:0004211;1.22e-16;10!UBERON:0009773;1.22e-16;10!UBERON:0001231;1.22e-16;10!UBERON:0004810;1.22e-16;10!UBERON:0006947;6.83e-16;3!UBERON:0004054;6.83e-16;3!UBERON:0000489;6.84e-15;29!UBERON:0004175;1.60e-14;21!UBERON:0006554;2.47e-14;30!UBERON:0001008;2.47e-14;30!UBERON:0005904;4.81e-12;4!UBERON:0000341;3.09e-11;2!UBERON:0006555;6.52e-11;15!UBERON:0004819;6.52e-11;15!UBERON:0001285;6.52e-11;15!UBERON:0007684;6.52e-11;15!UBERON:0000995;1.83e-07;17!UBERON:0006853;2.27e-07;3!UBERON:0007685;2.27e-07;3!UBERON:0004134;2.27e-07;3!UBERON:0003975;4.96e-07;18!UBERON:0003133;5.95e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.33e-24,26;UBERON:0003918,1.33e-24,26;UBERON:0011143,1.33e-24,26;UBERON:0005095,1.33e-24,26;UBERON:0007687,1.33e-24,26;UBERON:0000489,3.09e-20,31;UBERON:0002046,7.81e-17,5;UBERON:0004117,7.81e-17,5;UBERON:0007689,7.81e-17,5;UBERON:0007123,7.81e-17,5;UBERON:0003091,7.81e-17,5;UBERON:0004810,1.09e-16,10;UBERON:0006947,7.37e-16,3;UBERON:0004054,7.37e-16,3;UBERON:0006555,6.84e-14,16;UBERON:0004819,6.84e-14,16;UBERON:0006554,1.61e-12,47;UBERON:0001008,3.30e-12,48;UBERON:0005904,5.09e-12,4;UBERON:0004175,5.72e-12,25;UBERON:0000341,3.02e-11,2;UBERON:0003103,5.71e-11,68;UBERON:0004211,6.06e-11,15;UBERON:0009773,6.06e-11,15;UBERON:0001231,6.06e-11,15;UBERON:0001285,6.06e-11,15;UBERON:0007684,6.06e-11,15;UBERON:0004208,6.06e-11,15;UBERON:0005172,1.38e-10,54;UBERON:0005173,1.38e-10,54;UBERON:0002417,2.72e-09,60;UBERON:0000916,2.72e-09,60;UBERON:0003133,9.16e-09,48;UBERON:0005795,8.49e-08,22;UBERON:0009722,1.10e-07,11;UBERON:0007690,1.10e-07,11;UBERON:0006853,2.35e-07,3;UBERON:0007685,2.35e-07,3;UBERON:0004134,2.35e-07,3;UBERON:0005156,8.62e-07,59;UBERON:0000990,8.62e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.940364164434263,0,0.821246550437305,0.376627918784408,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0.447830948479849,0.971680998056939,1.03030227053675,0,0,0,0.232429036905685,0.822335776043652,0.309706370895104,0.28769239232215,0.512321413058201,0,0.344745680736619,0,0,0,0.272906150057846,0,0.918251677112708,0.320929027076094,0,0,0,0,0.290209238628584,0,0,1.50749199154046,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,3.85944562915731,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0.451199612907412,2.38747545023686,0,2.92278449306521,1.89992932007176,0,0,0.647747748306418,0,0.270946437543853,1.50506932156456,2.80363900349542,2.49322802678617,0.223874754722178,0,0,0,0,0,0.721287081534056,0.183138929636687,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0.0711418433484141,0,0,0,0.846694330895531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0.296964680832639,0,0,0,9.68385733699281,0,0,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0.179515288819544,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,51.2725296803106,6.69254513452506,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,1.45668227720456,6.70793484843964,0,0,0,0,0,0,0,0,0,9.10750547295337,0,21.0007283385508,0,0.870592065804026,6.29016005671309,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,5.43759380364467,2.7276385830199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0.477890301491107,0.449803112163605,0.621051827505038,0,0,4.17396049449387,0.150257608997218,0.761610424337591,0,0,1.93339002676479,0.464033759878494,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,2.81865670446741,0,0,0,0,0.265729680626726,0.163565394255844,0,5.65277690133554,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,8.47161288554784,0,0,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31855182437243,12.8992955729504,0,0.158013611732727,0,0,0,0.207216164163037,0,0,0,0,0,5.08064460229115,14.8919464553633,5.27350855629344,13.3775451456841,7.82988022584546,0.098150233615243,0.243835849964539,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0,0,0,0,1.41157948686277,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0,3.62497769231668,14.9980591822156,0,0,3.3639558774184,10.3108396410627,61.0393910653822,0.217716747896961,0,0,0.0717222053926763,1.33064142618405,0.0814032686109745,0.320182037633146,0,0.179650404213174,0,0,1.22068853494722,0.665756774185513,0,0 | |||
|short_description=p@chr2:113982484..113982512,- | |||
}} |
Revision as of 05:05, 21 January 2014
Short description: | p@chr2:113982484..113982512, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:113982484..113982512, - |
Coexpression cluster: | C1493_clear_thyroid_endometrioid_serous_throat_anaplastic_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.15e-21 | 6 |
stromal cell of endometrium | 1.15e-21 | 6 |
kidney cell | 4.44e-17 | 17 |
kidney epithelial cell | 4.44e-17 | 17 |
kidney tubule cell | 1.09e-16 | 10 |
nephron tubule epithelial cell | 1.09e-16 | 10 |
seromucus secreting cell | 3.17e-11 | 2 |
epithelial cell of nephron | 6.06e-11 | 15 |
brush border epithelial cell | 2.35e-07 | 3 |
kidney cortex tubule cell | 2.35e-07 | 3 |
epithelial cell of proximal tubule | 2.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.15e-21 | 6 |
female reproductive organ cancer | 3.93e-17 | 27 |
reproductive organ cancer | 8.11e-16 | 29 |
adenocarcinoma | 2.96e-15 | 25 |
clear cell adenocarcinoma | 1.72e-11 | 2 |