FFCP PHASE1:Hg19::chr2:87014966..87014973,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1077 | |||
|description=CAGE_peak_at_chr2:87014966..87014973,- | |||
|id=chr2:87014966..87014973,- | |||
|ontology_enrichment_celltype=CL:0000625!3.82e-44!11;CL:0000791!1.34e-26!18;CL:0000789!1.34e-26!18;CL:0002420!1.34e-26!18;CL:0002419!1.34e-26!18;CL:0000790!1.34e-26!18;CL:0000623!6.26e-24!3;CL:0000825!6.26e-24!3;CL:0000842!1.86e-23!3;CL:0000084!7.28e-19!25;CL:0000827!7.28e-19!25;CL:0000224!9.36e-18!4;CL:0000838!3.33e-16!52;CL:0000542!7.31e-16!53;CL:0000051!7.31e-16!53;CL:0000738!1.82e-14!140;CL:0000080!4.98e-12!6;CL:0002087!1.02e-11!119;CL:0000767!2.78e-11!3;CL:0000037!3.56e-11!172;CL:0000566!3.56e-11!172;CL:0000988!2.21e-10!182;CL:0002031!7.89e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000625;3.88e-36;11!CL:0000791;2.47e-22;18!CL:0000789;2.47e-22;18!CL:0002419;2.47e-22;18!CL:0000084;3.09e-16;25!CL:0000767;1.35e-09;3!CL:0000623;1.35e-09;3!CL:0000542;4.81e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,3.39e-36,11;CL:0000791,2.27e-22,18;CL:0000789,2.27e-22,18;CL:0002420,2.27e-22,18;CL:0002419,2.27e-22,18;CL:0000790,2.27e-22,18;CL:0000084,2.91e-16,25;CL:0000827,2.91e-16,25;CL:0000838,3.83e-12,52;CL:0000542,6.42e-12,53;CL:0000051,6.42e-12,53;CL:0000767,1.30e-09,3;CL:0000623,1.41e-09,3;CL:0000825,1.41e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.47e-22;18!CL:0000051;4.81e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.10e-10!7;UBERON:0002370!5.12e-09!4;UBERON:0005058!5.12e-09!4;UBERON:0009113!5.12e-09!4;UBERON:0003295!5.12e-09!4;UBERON:0005562!5.12e-09!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.66e-50;2!UBERON:0005058;1.66e-50;2!UBERON:0009113;1.66e-50;2!UBERON:0004177;6.32e-21;5!UBERON:0005057;6.32e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.66e-26,4;UBERON:0005058,8.66e-26,4;UBERON:0009113,8.66e-26,4;UBERON:0003295,8.66e-26,4;UBERON:0005562,8.66e-26,4;UBERON:0003351,1.44e-17,6;UBERON:0004177,3.29e-15,7;UBERON:0005057,3.29e-15,7;UBERON:0000974,5.98e-11,10;UBERON:0003408,5.98e-11,10;UBERON:0001042,5.98e-11,10;UBERON:0009145,5.98e-11,10;UBERON:0006562,4.83e-10,11;UBERON:0009722,4.83e-10,11;UBERON:0007690,4.83e-10,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30297638858328,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0.150575119077773,0.127986611154418,2.49861453104692,0.473554504088034,0,3.83052812126992,1.87208137048455,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,4.52122368852043,2.04846557176331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr2:87014966..87014973,- | |||
}} |
Revision as of 04:18, 21 January 2014
Short description: | p@chr2:87014966..87014973, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:87014966..87014973, - |
Coexpression cluster: | C1077_thymus_CD8_Natural_blood_NK_Peripheral_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 3.39e-36 | 11 |
mature alpha-beta T cell | 2.27e-22 | 18 |
alpha-beta T cell | 2.27e-22 | 18 |
immature T cell | 2.27e-22 | 18 |
mature T cell | 2.27e-22 | 18 |
immature alpha-beta T cell | 2.27e-22 | 18 |
T cell | 2.91e-16 | 25 |
pro-T cell | 2.91e-16 | 25 |
lymphoid lineage restricted progenitor cell | 3.83e-12 | 52 |
lymphocyte | 6.42e-12 | 53 |
common lymphoid progenitor | 6.42e-12 | 53 |
basophil | 1.30e-09 | 3 |
natural killer cell | 1.41e-09 | 3 |
pro-NK cell | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.66e-26 | 4 |
hemolymphoid system gland | 8.66e-26 | 4 |
thymic region | 8.66e-26 | 4 |
pharyngeal gland | 8.66e-26 | 4 |
thymus primordium | 8.66e-26 | 4 |
pharyngeal epithelium | 1.44e-17 | 6 |
hemopoietic organ | 3.29e-15 | 7 |
immune organ | 3.29e-15 | 7 |
neck | 5.98e-11 | 10 |
gland of gut | 5.98e-11 | 10 |
chordate pharynx | 5.98e-11 | 10 |
pharyngeal region of foregut | 5.98e-11 | 10 |
pharynx | 4.83e-10 | 11 |
entire pharyngeal arch endoderm | 4.83e-10 | 11 |
early pharyngeal endoderm | 4.83e-10 | 11 |