FFCP PHASE1:Hg19::chr2:12248310..12248334,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:12248310..12248334,- | |||
|id=chr2:12248310..12248334,- | |||
|ontology_enrichment_celltype=CL:0000188!3.97e-14!9;CL:0002564!5.44e-13!3;CL:0002590!3.50e-12!3;CL:0000183!7.26e-11!59;CL:0002556!3.15e-10!6;CL:0000055!2.01e-09!180;CL:0002602!3.00e-09!2;CL:0002600!4.82e-09!2;CL:0000187!6.61e-09!54;CL:0002549!1.01e-08!2;CL:0002575!1.32e-08!2;CL:0000680!2.71e-08!57;CL:0000056!2.71e-08!57;CL:0000355!2.71e-08!57;CL:0000393!9.58e-08!60;CL:0000211!9.58e-08!60;CL:0002552!2.44e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002564;2.40e-38;3!CL:0000228;3.16e-29;1!CL:0002372;3.16e-29;1!CL:0002602;1.66e-15;2!CL:0002363;2.37e-15;2!CL:0000056;2.43e-08;4!CL:0000737;2.43e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,1.80e-38,3;CL:0000228,3.16e-29,1;CL:0002372,3.16e-29,1;CL:0002602,1.78e-15,2;CL:0002363,2.74e-15,2;CL:0000008,2.74e-15,2;CL:0000737,2.43e-08,4;CL:0000515,2.43e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000008;2.37e-15;2!CL:0000515;2.43e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;7.48e-30;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,7.48e-30,1 | |||
|ontology_enrichment_uberon=UBERON:0005284!3.51e-19!5;UBERON:0000914!2.31e-13!83;UBERON:0002329!2.31e-13!83;UBERON:0003077!2.31e-13!83;UBERON:0003059!2.31e-13!83;UBERON:0007282!2.31e-13!83;UBERON:0009618!2.31e-13!83;UBERON:0007285!2.31e-13!83;UBERON:0002242!5.44e-13!3;UBERON:0003068!5.44e-13!3;UBERON:0002328!5.44e-13!3;UBERON:0004880!5.44e-13!3;UBERON:0002200!4.93e-12!11;UBERON:0006876!4.93e-12!11;UBERON:0001758!3.15e-10!6;UBERON:0003672!3.15e-10!6;UBERON:0000075!3.65e-10!13;UBERON:0005944!3.65e-10!13;UBERON:0004288!3.65e-10!13;UBERON:0003089!3.65e-10!13;UBERON:0009568!3.00e-09!2;UBERON:0002216!3.00e-09!2;UBERON:0002209!3.00e-09!2;UBERON:0002213!3.00e-09!2;UBERON:0004267!3.00e-09!2;UBERON:0006444!3.00e-09!2;UBERON:0001995!3.00e-09!2;UBERON:0004715!3.00e-09!2;UBERON:0001468!3.00e-09!2;UBERON:0001130!3.00e-09!2;UBERON:0001066!3.00e-09!2;UBERON:0003947!1.01e-08!2;UBERON:0005629!1.01e-08!2;UBERON:0005358!1.01e-08!2;UBERON:0001886!1.01e-08!2;UBERON:0004086!1.01e-08!2;UBERON:0005282!1.01e-08!2;UBERON:0005281!1.01e-08!2;UBERON:0005256!1.95e-08!143;UBERON:0000481!1.40e-07!347;UBERON:0001134!1.42e-07!61;UBERON:0002036!1.42e-07!61;UBERON:0003082!1.42e-07!61;UBERON:0004290!1.98e-07!70;UBERON:0002385!3.00e-07!63;UBERON:0001015!3.00e-07!63;UBERON:0000383!3.00e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;3.85e-51;5!UBERON:0002216;3.85e-51;5!UBERON:0011134;3.85e-51;5!UBERON:0002209;3.85e-51;5!UBERON:0002213;3.85e-51;5!UBERON:0007844;3.85e-51;5!UBERON:0011138;3.85e-51;5!UBERON:0001130;3.85e-51;5!UBERON:0001066;3.85e-51;5!UBERON:0001468;3.85e-51;5!UBERON:0002242;2.40e-38;3!UBERON:0004905;2.44e-32;8!UBERON:0000982;2.44e-32;8!UBERON:0004770;2.44e-32;8!UBERON:0004765;6.44e-18;26!UBERON:0000075;1.32e-16;16!UBERON:0006444;1.66e-15;2!UBERON:0001995;1.66e-15;2!UBERON:0004715;1.66e-15;2!UBERON:0003566;2.37e-15;2!UBERON:0001777;2.37e-15;2!UBERON:0002418;8.57e-11;3!UBERON:0004755;8.57e-11;3!UBERON:0001434;5.73e-09;36!UBERON:0003891;2.43e-08;4!UBERON:0000964;2.43e-08;4!UBERON:0010409;2.43e-08;4!UBERON:0002204;7.17e-08;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,3.24e-51,5;UBERON:0002216,3.24e-51,5;UBERON:0011134,3.24e-51,5;UBERON:0002209,3.24e-51,5;UBERON:0002213,3.24e-51,5;UBERON:0005856,3.24e-51,5;UBERON:0005866,3.24e-51,5;UBERON:0005863,3.24e-51,5;UBERON:0007844,3.24e-51,5;UBERON:0011138,3.24e-51,5;UBERON:0001130,3.24e-51,5;UBERON:0001066,3.24e-51,5;UBERON:0001468,3.24e-51,5;UBERON:0002242,1.80e-38,3;UBERON:0003068,1.80e-38,3;UBERON:0002328,1.80e-38,3;UBERON:0004880,1.80e-38,3;UBERON:0004905,2.19e-32,8;UBERON:0000982,2.19e-32,8;UBERON:0004770,2.19e-32,8;UBERON:0000075,1.25e-16,16;UBERON:0006444,1.78e-15,2;UBERON:0001995,1.78e-15,2;UBERON:0004715,1.78e-15,2;UBERON:0003566,2.74e-15,2;UBERON:0001777,2.74e-15,2;UBERON:0002418,8.99e-11,3;UBERON:0004755,8.99e-11,3;UBERON:0011137,4.38e-09,14;UBERON:0003891,2.61e-08,4;UBERON:0000964,2.61e-08,4;UBERON:0010409,2.61e-08,4;UBERON:0004348,2.61e-08,4;UBERON:0005427,2.61e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,2.59909341216098,0.662794751455832,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0.576175924479999,0,0.624320153660641,0,0,0,0,0,0.816616685019573,0.368502951935304,0.103325781175765,0,0,0,0,0.336672227908132,0.250237039743928,0,0.438977620880838,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,0.500170521059677,2.98391526069709,0,0,0,0,0.300946099727719,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0.462145851343933,0,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57507310867432,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.48761630199739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr2:12248310..12248334,- | |||
}} |
Revision as of 01:46, 21 January 2014
Short description: | p@chr2:12248310..12248334, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:12248310..12248334, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 1.80e-38 | 3 |
multinucleate cell | 3.16e-29 | 1 |
myotube | 3.16e-29 | 1 |
annulus pulposus cell | 1.78e-15 | 2 |
keratocyte | 2.74e-15 | 2 |
migratory cranial neural crest cell | 2.74e-15 | 2 |
striated muscle cell | 2.43e-08 | 4 |
skeletal muscle myoblast | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 3.24e-51 | 5 |
symphysis | 3.24e-51 | 5 |
nonsynovial joint | 3.24e-51 | 5 |
fibrous joint | 3.24e-51 | 5 |
cartilaginous joint | 3.24e-51 | 5 |
developing mesenchymal condensation | 3.24e-51 | 5 |
pre-cartilage condensation | 3.24e-51 | 5 |
cartilaginous condensation | 3.24e-51 | 5 |
cartilage element | 3.24e-51 | 5 |
post-cranial axial skeletal system | 3.24e-51 | 5 |
vertebral column | 3.24e-51 | 5 |
intervertebral disk | 3.24e-51 | 5 |
intervertebral joint | 3.24e-51 | 5 |
nucleus pulposus | 1.80e-38 | 3 |
axial mesoderm | 1.80e-38 | 3 |
notochord | 1.80e-38 | 3 |
chordamesoderm | 1.80e-38 | 3 |
articulation | 2.19e-32 | 8 |
skeletal joint | 2.19e-32 | 8 |
articular system | 2.19e-32 | 8 |
subdivision of skeletal system | 1.25e-16 | 16 |
annulus fibrosus | 1.78e-15 | 2 |
fibrocartilage | 1.78e-15 | 2 |
annulus fibrosus disci intervertebralis | 1.78e-15 | 2 |
head connective tissue | 2.74e-15 | 2 |
substantia propria of cornea | 2.74e-15 | 2 |
cartilage tissue | 8.99e-11 | 3 |
skeletal tissue | 8.99e-11 | 3 |
axial skeletal system | 4.38e-09 | 14 |
stroma | 2.61e-08 | 4 |
cornea | 2.61e-08 | 4 |
eye surface | 2.61e-08 | 4 |
optic eminence | 2.61e-08 | 4 |
corneal primordium | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 7.48e-30 | 1 |