FFCP PHASE1:Hg19::chr19:47975417..47975441,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6543 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11069 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UPR5,E9PGS7 | |||
|association_with_transcript=-110bp_to_ENST00000236877,ENST00000391903,NM_015063,uc002pgx.2,uc010xyq.1,uc010xyr.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_SLC8A2_5end | |||
|id=chr19:47975417..47975441,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.67e-16;82!UBERON:0010122;2.87e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.02e-107!57;UBERON:0005068!1.02e-107!57;UBERON:0006241!1.02e-107!57;UBERON:0007135!1.02e-107!57;UBERON:0002616!1.76e-94!59;UBERON:0002780!3.27e-92!41;UBERON:0001890!3.27e-92!41;UBERON:0006240!3.27e-92!41;UBERON:0000955!9.97e-91!69;UBERON:0006238!9.97e-91!69;UBERON:0003080!7.54e-90!42;UBERON:0001017!1.28e-89!82;UBERON:0005743!1.56e-88!86;UBERON:0001893!9.38e-88!34;UBERON:0002020!1.82e-87!34;UBERON:0003528!1.82e-87!34;UBERON:0002791!1.69e-84!33;UBERON:0001869!4.13e-82!32;UBERON:0000073!3.14e-79!94;UBERON:0001016!3.14e-79!94;UBERON:0003075!2.88e-78!86;UBERON:0007284!2.88e-78!86;UBERON:0002346!2.52e-74!90;UBERON:0002619!7.74e-69!22;UBERON:0007023!9.32e-68!115;UBERON:0003056!6.86e-63!61;UBERON:0001950!2.87e-62!20;UBERON:0000956!3.52e-60!25;UBERON:0000203!3.52e-60!25;UBERON:0000033!1.85e-51!123;UBERON:0000153!1.41e-48!129;UBERON:0007811!1.41e-48!129;UBERON:0004121!1.54e-39!169;UBERON:0000924!2.27e-38!173;UBERON:0006601!2.27e-38!173;UBERON:0002420!3.56e-29!9;UBERON:0007245!3.56e-29!9;UBERON:0010009!3.56e-29!9;UBERON:0010011!3.56e-29!9;UBERON:0000454!3.56e-29!9;UBERON:0002308!2.57e-28!9;UBERON:0000125!2.57e-28!9;UBERON:0000025!2.69e-24!194;UBERON:0009663!1.15e-22!7;UBERON:0000200!3.88e-21!6;UBERON:0001871!5.62e-21!7;UBERON:0004111!9.14e-21!241;UBERON:0003076!7.58e-19!15;UBERON:0003057!7.58e-19!15;UBERON:0002298!5.68e-18!8;UBERON:0000349!8.68e-18!5;UBERON:0002021!1.77e-17!5;UBERON:0001872!2.65e-17!5;UBERON:0000477!8.93e-17!286;UBERON:0004733!2.07e-15!12;UBERON:0002028!2.07e-15!12;UBERON:0007277!2.07e-15!12;UBERON:0000483!1.14e-14!309;UBERON:0000119!2.04e-14!312;UBERON:0000369!3.02e-14!4;UBERON:0002435!3.02e-14!4;UBERON:0000204!3.02e-14!4;UBERON:0010082!3.02e-14!4;UBERON:0004732!4.00e-14!13;UBERON:0000475!6.60e-14!365;UBERON:0000064!1.04e-13!219;UBERON:0002771!1.76e-11!3;UBERON:0005383!3.99e-11!3;UBERON:0005382!3.99e-11!3;UBERON:0000988!4.58e-10!3;UBERON:0006331!5.91e-10!3;UBERON:0001896!9.80e-10!3;UBERON:0005290!9.80e-10!3;UBERON:0010096!9.80e-10!3;UBERON:0000062!1.56e-09!511;UBERON:0002680!1.26e-08!9;UBERON:0001895!1.26e-08!9;UBERON:0010092!1.26e-08!9;UBERON:0001870!3.04e-08!2;UBERON:0001876!3.15e-08!2;UBERON:0000481!3.50e-08!347;UBERON:0001954!3.88e-08!2;UBERON:0003022!3.88e-08!2;UBERON:0002421!3.88e-08!2;UBERON:0002600!3.88e-08!2;UBERON:0001873!4.77e-08!2;UBERON:0010122!4.77e-08!2;UBERON:0001894!1.06e-07!7;UBERON:0006222!1.06e-07!7;UBERON:0001875!1.46e-07!2;UBERON:0006514!1.46e-07!2;UBERON:0002360!1.61e-07!2;UBERON:0000094!1.61e-07!2;UBERON:0007645!1.61e-07!2;UBERON:0001905!1.66e-07!2;UBERON:0002757!1.66e-07!2;UBERON:0010134!1.66e-07!2;UBERON:0002784!1.66e-07!2;UBERON:0005408!1.66e-07!2;UBERON:0001899!1.66e-07!2;UBERON:0002148!2.38e-07!2;UBERON:0009662!2.38e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.32e-98;32!UBERON:0002619;5.80e-95;22!UBERON:0002791;1.00e-91;32!UBERON:0003528;7.08e-91;34!UBERON:0002020;7.08e-91;34!UBERON:0001893;6.21e-88;34!UBERON:0001950;3.24e-84;20!UBERON:0000956;1.64e-83;25!UBERON:0000203;1.64e-83;25!UBERON:0002780;2.67e-75;41!UBERON:0001890;2.67e-75;41!UBERON:0000073;2.07e-44;53!UBERON:0002616;2.07e-44;53!UBERON:0000955;1.73e-39;68!UBERON:0001017;1.01e-34;75!UBERON:0000200;4.80e-34;6!UBERON:0002420;1.14e-29;9!UBERON:0007245;1.14e-29;9!UBERON:0010009;1.14e-29;9!UBERON:0010011;1.14e-29;9!UBERON:0000454;1.14e-29;9!UBERON:0000349;1.84e-28;5!UBERON:0002021;5.55e-28;5!UBERON:0001016;3.43e-24;83!UBERON:0000369;1.59e-22;4!UBERON:0002435;1.59e-22;4!UBERON:0000204;1.59e-22;4!UBERON:0000125;1.92e-21;9!UBERON:0002308;1.92e-21;9!UBERON:0001871;7.68e-21;6!UBERON:0009663;1.24e-19;7!UBERON:0001872;1.53e-18;5!UBERON:0001870;9.41e-18;3!UBERON:0005383;2.32e-17;3!UBERON:0005382;2.32e-17;3!UBERON:0007023;5.98e-15;114!UBERON:0002771;7.23e-13;2!UBERON:0001876;1.29e-12;2!UBERON:0002702;1.82e-12;2!UBERON:0001954;1.87e-12;2!UBERON:0003022;1.87e-12;2!UBERON:0002421;1.87e-12;2!UBERON:0002600;1.87e-12;2!UBERON:0001873;2.87e-12;2!UBERON:0011216;3.94e-11;132!UBERON:0010314;2.22e-08;132!UBERON:0001894;2.24e-07;7!UBERON:0002022;3.67e-07;1!UBERON:0003112;4.38e-07;1!UBERON:0011158;4.38e-07;1!UBERON:0003128;4.38e-07;1!UBERON:0001703;4.38e-07;1!UBERON:0002241;4.38e-07;1!UBERON:0002902;5.37e-07;1!UBERON:0009899;5.37e-07;1!UBERON:0007190;5.37e-07;1!UBERON:0002581;6.20e-07;1!UBERON:0001882;6.95e-07;1!UBERON:0005403;6.95e-07;1!UBERON:0001874;8.49e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.06e-110,32;UBERON:0002780,6.37e-107,41;UBERON:0001890,6.37e-107,41;UBERON:0003080,6.37e-107,41;UBERON:0006240,6.37e-107,41;UBERON:0001893,4.49e-104,34;UBERON:0003528,9.26e-104,34;UBERON:0002020,9.26e-104,34;UBERON:0002791,3.95e-102,32;UBERON:0002619,6.58e-95,22;UBERON:0000073,9.90e-88,53;UBERON:0002616,9.90e-88,53;UBERON:0001950,3.66e-84,20;UBERON:0000956,1.83e-83,25;UBERON:0000203,1.83e-83,25;UBERON:0001049,8.19e-83,56;UBERON:0005068,8.19e-83,56;UBERON:0006241,8.19e-83,56;UBERON:0007135,8.19e-83,56;UBERON:0000955,3.64e-81,68;UBERON:0006238,3.64e-81,68;UBERON:0001017,4.57e-72,81;UBERON:0003056,1.27e-70,61;UBERON:0001016,1.97e-64,89;UBERON:0003075,4.53e-55,82;UBERON:0007284,4.53e-55,82;UBERON:0002346,2.84e-52,86;UBERON:0007023,1.03e-44,114;UBERON:0010371,2.59e-42,104;UBERON:0010314,1.09e-34,132;UBERON:0000200,4.94e-34,6;UBERON:0004121,3.39e-31,171;UBERON:0000924,3.39e-31,171;UBERON:0006601,3.39e-31,171;UBERON:0002420,1.11e-29,9;UBERON:0007245,1.11e-29,9;UBERON:0010009,1.11e-29,9;UBERON:0010011,1.11e-29,9;UBERON:0000454,1.11e-29,9;UBERON:0000349,1.84e-28,5;UBERON:0002021,6.04e-28,5;UBERON:0011216,3.67e-24,223;UBERON:0000369,1.42e-22,4;UBERON:0002435,1.42e-22,4;UBERON:0000204,1.42e-22,4;UBERON:0010082,1.42e-22,4;UBERON:0000125,1.89e-21,9;UBERON:0002308,1.89e-21,9;UBERON:0001871,7.53e-21,6;UBERON:0000025,2.54e-20,192;UBERON:0009663,1.19e-19,7;UBERON:0001872,1.56e-18,5;UBERON:0001870,9.68e-18,3;UBERON:0005383,2.14e-17,3;UBERON:0005382,2.14e-17,3;UBERON:0004111,4.45e-15,240;UBERON:0002771,7.02e-13,2;UBERON:0001876,1.33e-12,2;UBERON:0001954,1.87e-12,2;UBERON:0002702,1.87e-12,2;UBERON:0003022,1.87e-12,2;UBERON:0002421,1.87e-12,2;UBERON:0002600,1.87e-12,2;UBERON:0001873,2.64e-12,2;UBERON:0010122,2.64e-12,2;UBERON:0000483,1.55e-10,306;UBERON:0000119,2.24e-10,309;UBERON:0001894,2.24e-07,7;UBERON:0006222,2.24e-07,7;UBERON:0002022,3.78e-07,1;UBERON:0003112,4.78e-07,1;UBERON:0011158,4.78e-07,1;UBERON:0003128,4.78e-07,1;UBERON:0001703,4.78e-07,1;UBERON:0002241,4.78e-07,1;UBERON:0004761,4.78e-07,1;UBERON:0009617,4.78e-07,1;UBERON:0002902,5.06e-07,1;UBERON:0009899,5.06e-07,1;UBERON:0007190,5.69e-07,1;UBERON:0002581,6.02e-07,1;UBERON:0001882,6.76e-07,1;UBERON:0005403,6.76e-07,1;UBERON:0001874,8.49e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22664428346111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8536911941574,12.0975698113041,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,14.5399911914283,10.9466355830984,1.99613798001194,0,0,0,0,0,0,0,0,0,16.8290863304629,6.75340056302285,0,0.884634079449797,0.591095237907095,14.4794362121622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,4.45102446878144,0,0,0,0.394584402849391,0,0.61214552326098,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6118211305139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60462317580768,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.2187282127535,6.6739668994672,0,0,0,0,0,15.6126360611123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3795681392407,25.2594368347064,10.6412291100525,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6232032851456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6254897424592,18.420554922326,8.46059453002902,16.4093091392604,1.00828678488687,13.6239787354509,14.048381169971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5075169236789,21.0891086625739,14.0547021620805,11.0977667839337,0.546974809018219,0,0,0,0,2.14280734351315,0.672567444437648,0,0,0,0,0,0.40781839786099,12.2337358826899,0,0,0,9.74116657479212,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,18.4256938417379,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24119595034274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@SLC8A2 | |||
}} |
Revision as of 00:12, 21 January 2014
Short description: | p4@SLC8A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC8A2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -110bp_to_ENST00000236877, ENST00000391903, NM_015063, uc002pgx.2, uc010xyq.1, uc010xyr.1_5end |
EntrezGene: | SLC8A2 |
HGNC: | 11069 |
UniProt: | Q9UPR5E9PGS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data