FFCP PHASE1:Hg19::chr19:6739662..6739748,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9322 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12304 | |||
|TSSclassifier=strong | |||
|UniProt=Q15642 | |||
|association_with_transcript=0bp_to_ENST00000313244,ENST00000313285,ENST00000475024,ENST00000481339,NM_004240,uc002mfr.2,uc002mfs.2,uc010dux.1,uc010duy.2,uc010duz.2_5end | |||
|description=CAGE_peak_1_at_TRIP10_5end | |||
|id=chr19:6739662..6739748,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.22e-14!254;CL:0002321!2.21e-11!248;CL:0000220!3.71e-11!246 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.43e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.83e-14,253;CL:0002321,1.01e-11,250;CL:0000222,7.38e-07,121;CL:0000349,7.42e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.48e-13!659;UBERON:0003104!1.42e-11!238;UBERON:0009142!1.42e-11!238;UBERON:0002100!3.50e-11!216;UBERON:0003914!3.59e-11!118;UBERON:0004872!1.22e-10!84;UBERON:0000926!1.74e-10!448;UBERON:0004120!1.74e-10!448;UBERON:0006603!1.74e-10!448;UBERON:0000467!2.24e-09!625;UBERON:0000478!3.01e-09!24;UBERON:0000480!3.62e-09!626;UBERON:0000055!4.39e-09!69;UBERON:0001981!1.27e-08!60;UBERON:0007500!1.27e-08!60;UBERON:0004537!1.27e-08!60;UBERON:0006965!1.27e-08!60;UBERON:0003103!1.58e-08!69;UBERON:0004119!2.81e-08!169;UBERON:0000925!2.81e-08!169;UBERON:0006595!2.81e-08!169;UBERON:0005256!3.25e-08!143;UBERON:0002049!3.37e-08!79;UBERON:0007798!3.37e-08!79;UBERON:0004923!4.17e-08!57;UBERON:0000490!4.94e-08!138;UBERON:0000466!6.66e-08!126;UBERON:0000922!9.04e-08!612;UBERON:0000464!2.82e-07!104;UBERON:0009569!4.22e-07!113;UBERON:0005631!4.49e-07!14;UBERON:0000158!4.49e-07!14;UBERON:0002050!7.36e-07!605;UBERON:0005423!7.36e-07!605;UBERON:0001008!7.66e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.18e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.70e-12,199;UBERON:0003914,3.99e-11,117;UBERON:0004872,1.97e-10,83;UBERON:0003104,2.82e-10,160;UBERON:0009142,2.82e-10,160;UBERON:0000478,2.94e-09,24;UBERON:0000055,7.09e-09,68;UBERON:0001008,1.88e-08,48;UBERON:0003103,1.93e-08,68;UBERON:0007500,2.06e-08,59;UBERON:0001981,2.06e-08,59;UBERON:0004537,2.06e-08,59;UBERON:0006965,2.06e-08,59;UBERON:0005256,3.09e-08,122;UBERON:0006554,4.23e-08,47;UBERON:0000490,4.71e-08,148;UBERON:0004119,5.29e-08,160;UBERON:0000925,5.29e-08,160;UBERON:0006595,5.29e-08,160;UBERON:0002049,5.29e-08,78;UBERON:0007798,5.29e-08,78;UBERON:0004923,1.68e-07,66;UBERON:0005631,4.41e-07,14;UBERON:0000158,4.41e-07,14;UBERON:0009569,4.54e-07,112;UBERON:0000922,9.91e-07,592 | |||
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| |||
|short_description=p1@TRIP10 | |||
}} |
Revision as of 20:57, 20 January 2014
Short description: | p1@TRIP10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIP10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000313244, ENST00000313285, ENST00000475024, ENST00000481339, NM_004240, uc002mfr.2, uc002mfs.2, uc010dux.1, uc010duy.2, uc010duz.2_5end |
EntrezGene: | TRIP10 |
HGNC: | 12304 |
UniProt: | Q15642 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.83e-14 | 253 |
embryonic cell | 1.01e-11 | 250 |
mesodermal cell | 7.38e-07 | 121 |
extraembryonic cell | 7.42e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
trunk | 2.70e-12 | 199 |
epithelial tube | 3.99e-11 | 117 |
splanchnic layer of lateral plate mesoderm | 1.97e-10 | 83 |
mesenchyme | 2.82e-10 | 160 |
entire embryonic mesenchyme | 2.82e-10 | 160 |
extraembryonic structure | 2.94e-09 | 24 |
vessel | 7.09e-09 | 68 |
renal system | 1.88e-08 | 48 |
compound organ | 1.93e-08 | 68 |
epithelial tube open at both ends | 2.06e-08 | 59 |
blood vessel | 2.06e-08 | 59 |
blood vasculature | 2.06e-08 | 59 |
vascular cord | 2.06e-08 | 59 |
trunk mesenchyme | 3.09e-08 | 122 |
urinary system structure | 4.23e-08 | 47 |
unilaminar epithelium | 4.71e-08 | 148 |
endoderm-derived structure | 5.29e-08 | 160 |
endoderm | 5.29e-08 | 160 |
presumptive endoderm | 5.29e-08 | 160 |
vasculature | 5.29e-08 | 78 |
vascular system | 5.29e-08 | 78 |
organ component layer | 1.68e-07 | 66 |
extraembryonic membrane | 4.41e-07 | 14 |
membranous layer | 4.41e-07 | 14 |
subdivision of trunk | 4.54e-07 | 112 |
embryo | 9.91e-07 | 592 |