FFCP PHASE1:Hg19::chr19:1095330..1095381,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5434 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9192 | |||
|TSSclassifier=strong | |||
|UniProt=P19388 | |||
|association_with_transcript=9bp_to_ENST00000215587,NM_002695,uc002lre.3,uc010xgf.1_5end | |||
|coexpression_cluster_id=C534 | |||
|description=CAGE_peak_1_at_POLR2E_5end | |||
|id=chr19:1095330..1095381,- | |||
|ontology_enrichment_celltype=CL:0002321!2.43e-27!248;CL:0000220!9.17e-27!246;CL:0000222!2.33e-25!119;CL:0000144!3.46e-22!625;CL:0002371!7.62e-22!591;CL:0000055!3.99e-19!180;CL:0000183!5.54e-18!59;CL:0000548!1.90e-17!679;CL:0000004!1.90e-17!679;CL:0000255!1.90e-17!679;CL:0000012!1.36e-16!682;CL:0000680!1.01e-15!57;CL:0000056!1.01e-15!57;CL:0000355!1.01e-15!57;CL:0000187!1.72e-15!54;CL:0000393!4.80e-15!60;CL:0000211!4.80e-15!60;CL:0000192!7.99e-14!42;CL:0000514!7.99e-14!42;CL:0002078!1.83e-12!44;CL:0000115!4.61e-12!35;CL:0000359!8.59e-11!32;CL:0000213!1.22e-09!57;CL:0000215!1.22e-09!57;CL:0000071!2.29e-09!18;CL:0002546!2.29e-09!18;CL:0002139!3.32e-09!24;CL:0000325!1.51e-08!39;CL:1000449!1.29e-07!16;CL:0002681!5.46e-07!13;CL:0002584!5.46e-07!13;CL:0000003!5.55e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.32e-10;36!CL:0000359;3.49e-10;32!CL:0000192;4.87e-10;43!CL:0000071;2.29e-09;18!CL:0002139;3.41e-09;24!CL:0002078;4.56e-09;45!CL:0000187;4.78e-09;55!CL:0000393;4.57e-08;61!CL:0000211;4.57e-08;61!CL:1000449;1.51e-07;15!CL:0002681;6.01e-07;12!CL:0002584;6.01e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.29e-28,250;CL:0000222,6.31e-26,121;CL:0000680,7.67e-16,58;CL:0000056,7.67e-16,58;CL:0000355,7.67e-16,58;CL:0000187,1.31e-15,55;CL:0000393,3.59e-15,61;CL:0000211,3.59e-15,61;CL:0000192,6.31e-14,43;CL:0000514,6.31e-14,43;CL:0002078,7.56e-13,45;CL:0000115,1.88e-12,36;CL:0000359,8.59e-11,32;CL:0000213,5.57e-10,58;CL:0000215,5.57e-10,58;CL:0000071,2.29e-09,18;CL:0002546,2.29e-09,18;CL:0002139,3.32e-09,24;CL:1000449,1.46e-07,15;CL:0002681,5.88e-07,12;CL:0002584,5.88e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;4.87e-10;43!CL:0002546;2.29e-09;18!CL:0000355;7.33e-09;58!CL:0000222;5.65e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.39e-21!143;UBERON:0000490!2.44e-20!138;UBERON:0003914!1.51e-19!118;UBERON:0000914!1.81e-18!83;UBERON:0002329!1.81e-18!83;UBERON:0003077!1.81e-18!83;UBERON:0003059!1.81e-18!83;UBERON:0007282!1.81e-18!83;UBERON:0009618!1.81e-18!83;UBERON:0007285!1.81e-18!83;UBERON:0000486!3.87e-18!82;UBERON:0002049!7.99e-18!79;UBERON:0007798!7.99e-18!79;UBERON:0004290!1.22e-17!70;UBERON:0000119!1.68e-16!312;UBERON:0000483!3.61e-16!309;UBERON:0004872!5.02e-16!84;UBERON:0000055!8.83e-16!69;UBERON:0001981!5.54e-15!60;UBERON:0007500!5.54e-15!60;UBERON:0004537!5.54e-15!60;UBERON:0006965!5.54e-15!60;UBERON:0001134!1.22e-14!61;UBERON:0002036!1.22e-14!61;UBERON:0003082!1.22e-14!61;UBERON:0002385!5.65e-14!63;UBERON:0001015!5.65e-14!63;UBERON:0000383!5.65e-14!63;UBERON:0002100!1.29e-13!216;UBERON:0001637!1.57e-13!42;UBERON:0003509!1.57e-13!42;UBERON:0004572!1.57e-13!42;UBERON:0004535!1.83e-11!110;UBERON:0001009!1.87e-11!113;UBERON:0003104!1.20e-09!238;UBERON:0009142!1.20e-09!238;UBERON:0001986!2.29e-09!18;UBERON:0004638!2.29e-09!18;UBERON:0004852!2.29e-09!18;UBERON:0006914!2.64e-09!25;UBERON:0000475!4.56e-09!365;UBERON:0004573!4.75e-09!33;UBERON:0004571!4.75e-09!33;UBERON:0000487!4.87e-09!22;UBERON:0000477!1.78e-08!286;UBERON:0000481!2.84e-08!347;UBERON:0004211!1.29e-07!16;UBERON:0001285!1.29e-07!16;UBERON:0007684!1.29e-07!16;UBERON:0003220!1.29e-07!16;UBERON:0004208!1.29e-07!16;UBERON:0000353!1.87e-07!17;UBERON:0004111!2.06e-07!241;UBERON:0001225!5.46e-07!13;UBERON:0008987!5.46e-07!13;UBERON:0000926!8.74e-07!448;UBERON:0004120!8.74e-07!448;UBERON:0006603!8.74e-07!448;UBERON:0006555!9.52e-07!17;UBERON:0005103!9.52e-07!17;UBERON:0000083!9.52e-07!17;UBERON:0009201!9.52e-07!17;UBERON:0004819!9.52e-07!17;UBERON:0006553!9.52e-07!17;UBERON:0003074!9.52e-07!17;UBERON:0003060!9.52e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.16e-10;74!UBERON:0007500;2.13e-10;56!UBERON:0001981;2.13e-10;56!UBERON:0004537;2.13e-10;56!UBERON:0001637;1.01e-09;42!UBERON:0003509;1.01e-09;42!UBERON:0004572;1.01e-09;42!UBERON:0004638;2.29e-09;18!UBERON:0001986;2.29e-09;18!UBERON:0004852;2.29e-09;18!UBERON:0006914;2.74e-09;25!UBERON:0000490;4.42e-09;33!UBERON:0000487;5.01e-09;22!UBERON:0002049;1.33e-08;75!UBERON:0007798;1.33e-08;75!UBERON:0000055;1.40e-08;65!UBERON:0004573;3.29e-08;33!UBERON:0004571;3.29e-08;33!UBERON:0000353;4.69e-08;15!UBERON:0006555;1.51e-07;15!UBERON:0004819;1.51e-07;15!UBERON:0001285;1.51e-07;15!UBERON:0007684;1.51e-07;15!UBERON:0001225;6.01e-07;12!UBERON:0008987;6.01e-07;12 | |||
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| |||
|short_description=p1@POLR2E | |||
}} |
Revision as of 20:11, 20 January 2014
Short description: | p1@POLR2E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POLR2E_5end |
Coexpression cluster: | C534_Mesenchymal_Alveolar_Renal_Placental_Fibroblast_Smooth_Tracheal |
Association with transcript: | 9bp_to_ENST00000215587, NM_002695, uc002lre.3, uc010xgf.1_5end |
EntrezGene: | POLR2E |
HGNC: | 9192 |
UniProt: | P19388 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.29e-28 | 250 |
mesodermal cell | 6.31e-26 | 121 |
muscle precursor cell | 7.67e-16 | 58 |
myoblast | 7.67e-16 | 58 |
multi-potent skeletal muscle stem cell | 7.67e-16 | 58 |
muscle cell | 1.31e-15 | 55 |
electrically responsive cell | 3.59e-15 | 61 |
electrically active cell | 3.59e-15 | 61 |
smooth muscle cell | 6.31e-14 | 43 |
smooth muscle myoblast | 6.31e-14 | 43 |
meso-epithelial cell | 7.56e-13 | 45 |
endothelial cell | 1.88e-12 | 36 |
vascular associated smooth muscle cell | 8.59e-11 | 32 |
lining cell | 5.57e-10 | 58 |
barrier cell | 5.57e-10 | 58 |
blood vessel endothelial cell | 2.29e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.29e-09 | 18 |
endothelial cell of vascular tree | 3.32e-09 | 24 |
epithelial cell of nephron | 1.46e-07 | 15 |
kidney cortical cell | 5.88e-07 | 12 |
renal cortical epithelial cell | 5.88e-07 | 12 |