FFCP PHASE1:Hg19::chr18:47363947..47363978,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr18:47363947..47363978,- | |||
|id=chr18:47363947..47363978,- | |||
|ontology_enrichment_celltype=CL:0000181!3.40e-09!12;CL:0000417!3.40e-09!12;CL:0000668!3.40e-09!12;CL:0000414!3.40e-09!12;CL:0000412!3.40e-09!12;CL:0000182!3.40e-09!12;CL:1000507!3.52e-09!12;CL:1000494!3.52e-09!12;CL:0000239!4.33e-07!3;CL:1000615!4.33e-07!3;CL:0002306!4.33e-07!3;CL:0000223!6.49e-07!59;CL:1000449!8.33e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.29e-15;12!CL:0000317;3.70e-11;2!CL:1000448;3.70e-11;2!CL:0002308;3.70e-11;2!CL:0002140;3.70e-11;2!CL:0000239;7.26e-08;3!CL:1000615;7.26e-08;3!CL:0002306;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.17e-15,12;CL:0000317,3.70e-11,2;CL:1000448,3.70e-11,2;CL:0002308,3.70e-11,2;CL:0002140,3.70e-11,2;CL:0000239,6.34e-08,3;CL:1000615,6.34e-08,3;CL:0002306,6.34e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!2.12e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;3.70e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.09e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0005172!5.54e-11!55;UBERON:0005173!5.54e-11!55;UBERON:0002365!4.16e-10!31;UBERON:0002330!4.16e-10!31;UBERON:0002417!1.24e-09!61;UBERON:0000916!1.24e-09!61;UBERON:0009773!3.52e-09!12;UBERON:0001231!3.52e-09!12;UBERON:0004810!3.52e-09!12;UBERON:0002530!2.70e-08!59;UBERON:0002107!4.59e-08!19;UBERON:0006925!4.59e-08!19;UBERON:0008836!4.59e-08!19;UBERON:0002113!3.45e-07!27;UBERON:0003918!3.45e-07!27;UBERON:0005095!3.45e-07!27;UBERON:0007687!3.45e-07!27;UBERON:0005177!4.31e-07!107;UBERON:0006853!4.33e-07!3;UBERON:0007685!4.33e-07!3;UBERON:0004134!4.33e-07!3;UBERON:0002368!5.72e-07!35;UBERON:0008835!7.10e-07!22;UBERON:0003894!7.10e-07!22;UBERON:0004211!8.33e-07!16;UBERON:0001285!8.33e-07!16;UBERON:0007684!8.33e-07!16;UBERON:0003220!8.33e-07!16;UBERON:0004208!8.33e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.32e-17;19!UBERON:0006925;3.32e-17;19!UBERON:0002365;9.96e-17;31!UBERON:0002330;9.96e-17;31!UBERON:0002423;3.55e-13;25!UBERON:0002419;3.70e-11;2!UBERON:0007771;3.70e-11;2!UBERON:0003297;3.70e-11;2!UBERON:0001821;3.70e-11;2!UBERON:0003487;3.70e-11;2!UBERON:0001820;3.70e-11;2!UBERON:0002368;5.83e-09;33!UBERON:0006853;7.26e-08;3!UBERON:0007685;7.26e-08;3!UBERON:0004134;7.26e-08;3!UBERON:0000949;1.40e-07;43!UBERON:0005172;4.47e-07;52!UBERON:0005173;4.47e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.05e-17,19;UBERON:0006925,3.05e-17,19;UBERON:0008836,3.05e-17,19;UBERON:0002365,3.19e-16,31;UBERON:0002330,3.19e-16,31;UBERON:0008835,5.98e-15,22;UBERON:0003894,5.98e-15,22;UBERON:0009854,2.56e-14,23;UBERON:0007499,3.33e-13,25;UBERON:0009497,3.33e-13,25;UBERON:0000015,3.33e-13,25;UBERON:0002423,3.33e-13,25;UBERON:0006235,3.33e-13,25;UBERON:0004161,3.33e-13,25;UBERON:0009856,1.04e-12,26;UBERON:0002419,3.70e-11,2;UBERON:0007771,3.70e-11,2;UBERON:0003297,3.70e-11,2;UBERON:0001821,3.70e-11,2;UBERON:0003487,3.70e-11,2;UBERON:0001820,3.70e-11,2;UBERON:0005089,3.70e-11,2;UBERON:0005088,3.70e-11,2;UBERON:0002368,1.56e-09,35;UBERON:0005172,2.19e-09,54;UBERON:0005173,2.19e-09,54;UBERON:0002530,1.40e-08,59;UBERON:0002417,1.87e-08,60;UBERON:0000916,1.87e-08,60;UBERON:0006853,6.34e-08,3;UBERON:0007685,6.34e-08,3;UBERON:0004134,6.34e-08,3;UBERON:0000949,1.76e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,3.9313088667105,1.18157981336281,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,1.66215201785745,0.223874754722178,0,0,0,0,0,3.09123034943167,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01260162485693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0.816164040795739,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04135843001079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,7.18105945022604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0.0771741581079447,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:47363947..47363978,- | |||
}} |
Revision as of 19:20, 20 January 2014
Short description: | p@chr18:47363947..47363978, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:47363947..47363978, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.17e-15 | 12 |
sebum secreting cell | 3.70e-11 | 2 |
epithelial cell of sweat gland | 3.70e-11 | 2 |
epithelial cell of skin gland | 3.70e-11 | 2 |
acinar cell of sebaceous gland | 3.70e-11 | 2 |
brush border epithelial cell | 6.34e-08 | 3 |
kidney cortex tubule cell | 6.34e-08 | 3 |
epithelial cell of proximal tubule | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 3.05e-17 | 19 |
digestive gland | 3.05e-17 | 19 |
liver bud | 3.05e-17 | 19 |
exocrine gland | 3.19e-16 | 31 |
exocrine system | 3.19e-16 | 31 |
hepatic diverticulum | 5.98e-15 | 22 |
liver primordium | 5.98e-15 | 22 |
digestive tract diverticulum | 2.56e-14 | 23 |
epithelial sac | 3.33e-13 | 25 |
epithelium of foregut-midgut junction | 3.33e-13 | 25 |
anatomical boundary | 3.33e-13 | 25 |
hepatobiliary system | 3.33e-13 | 25 |
foregut-midgut junction | 3.33e-13 | 25 |
septum transversum | 3.33e-13 | 25 |
sac | 1.04e-12 | 26 |
skin gland | 3.70e-11 | 2 |
epidermis gland | 3.70e-11 | 2 |
gland of integumental system | 3.70e-11 | 2 |
sebaceous gland | 3.70e-11 | 2 |
skin sebaceous gland | 3.70e-11 | 2 |
sweat gland | 3.70e-11 | 2 |
sweat gland placode | 3.70e-11 | 2 |
sebaceous gland placode | 3.70e-11 | 2 |
endocrine gland | 1.56e-09 | 35 |
abdomen element | 2.19e-09 | 54 |
abdominal segment element | 2.19e-09 | 54 |
gland | 1.40e-08 | 59 |
abdominal segment of trunk | 1.87e-08 | 60 |
abdomen | 1.87e-08 | 60 |
renal cortex tubule | 6.34e-08 | 3 |
region of nephron tubule | 6.34e-08 | 3 |
proximal tubule | 6.34e-08 | 3 |
endocrine system | 1.76e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.09e-11 | 2 |