FFCP PHASE1:Hg19::chr17:47286244..47286274,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2793 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4412 | |||
|TSSclassifier=strong | |||
|UniProt=D6RDH5 | |||
|association_with_transcript=0bp_to_ENST00000503070_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_2_at_GNGT2_5end | |||
|id=chr17:47286244..47286274,- | |||
|ontology_enrichment_celltype=CL:0000875!5.31e-12!3;CL:0002396!5.31e-12!3;CL:0002393!1.91e-10!9;CL:0002397!1.91e-10!9;CL:0002087!1.05e-09!119;CL:0000738!2.15e-09!140;CL:0000988!3.40e-09!182;CL:0000037!3.56e-09!172;CL:0000566!3.56e-09!172;CL:0002031!4.00e-09!124;CL:0002032!7.03e-09!165;CL:0000837!7.03e-09!165;CL:0002057!7.47e-09!42;CL:0000860!4.08e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000306;9.11e-07;4!CL:0002222;9.11e-07;4!CL:0002224;9.11e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,9.11e-07,4;CL:0002222,9.11e-07,4;CL:0002224,9.11e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.67e-30;3!UBERON:0006238;6.23e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;2.90e-08;11!DOID:5409;8.61e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.96e-08,11;DOID:5409,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.78e-09!2;UBERON:0002757!1.78e-09!2;UBERON:0010134!1.78e-09!2;UBERON:0002784!1.78e-09!2;UBERON:0005408!1.78e-09!2;UBERON:0001899!1.78e-09!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.04e-45;2!UBERON:0002757;2.04e-45;2!UBERON:0010134;2.04e-45;2!UBERON:0005408;2.04e-45;2!UBERON:0001899;2.04e-45;2!UBERON:0003296;2.63e-23;4!UBERON:0010133;2.63e-23;4!UBERON:0002784;2.63e-23;4!UBERON:0000966;1.24e-18;5!UBERON:0005388;1.24e-18;5!UBERON:0001802;1.24e-18;5!UBERON:0000970;4.86e-18;20!UBERON:0002104;3.33e-17;21!UBERON:0000020;9.48e-16;23!UBERON:0001032;4.11e-15;24!UBERON:0004456;4.11e-15;24!UBERON:0001894;8.94e-14;7!UBERON:0002360;3.43e-12;2!UBERON:0000094;3.43e-12;2!UBERON:0010743;3.43e-12;2!UBERON:0000019;4.22e-11;19!UBERON:0000047;4.22e-11;19!UBERON:0004088;4.22e-11;19!UBERON:0010230;4.22e-11;19!UBERON:0001456;4.17e-10;21!UBERON:0010077;9.11e-07;4!UBERON:0005389;9.11e-07;4!UBERON:0000484;9.11e-07;4!UBERON:0000965;9.11e-07;4!UBERON:0001803;9.11e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.04e-45,2;UBERON:0002757,2.04e-45,2;UBERON:0010134,2.04e-45,2;UBERON:0005408,2.04e-45,2;UBERON:0001899,2.04e-45,2;UBERON:0003296,2.63e-23,4;UBERON:0010133,2.63e-23,4;UBERON:0002784,2.63e-23,4;UBERON:0000970,3.33e-17,21;UBERON:0002104,3.33e-17,21;UBERON:0000966,1.05e-15,6;UBERON:0005388,1.05e-15,6;UBERON:0001802,1.05e-15,6;UBERON:0000020,4.11e-15,24;UBERON:0001032,4.11e-15,24;UBERON:0004456,4.11e-15,24;UBERON:0001894,8.94e-14,7;UBERON:0006222,8.94e-14,7;UBERON:0002360,3.24e-12,2;UBERON:0000094,3.24e-12,2;UBERON:0010743,3.24e-12,2;UBERON:0000019,1.40e-10,20;UBERON:0000047,1.40e-10,20;UBERON:0010312,1.40e-10,20;UBERON:0004088,1.40e-10,20;UBERON:0010230,1.40e-10,20;UBERON:0003072,1.40e-10,20;UBERON:0004128,1.40e-10,20;UBERON:0003071,1.40e-10,20;UBERON:0001456,1.12e-09,22;UBERON:0003056,4.11e-09,61;UBERON:0005085,4.87e-07,31;UBERON:0003075,7.87e-07,82;UBERON:0007284,7.87e-07,82;UBERON:0001017,8.50e-07,81;UBERON:0010077,9.11e-07,4;UBERON:0005389,9.11e-07,4;UBERON:0000484,9.11e-07,4;UBERON:0002546,9.11e-07,4;UBERON:0000965,9.11e-07,4;UBERON:0001803,9.11e-07,4;UBERON:0003073,9.11e-07,4;UBERON:0005426,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0,0.422510572623884,0,0.209658645508376,0,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9850074139283,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0.144269212976445,0,0,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53569778007781,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,119.543811872902,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52183498429854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,182.138624198617,197.734828664668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.0909534798991,15.3273203380745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1145275405795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p2@GNGT2 | |||
}} |
Revision as of 16:05, 20 January 2014
Short description: | p2@GNGT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GNGT2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000503070_5end |
EntrezGene: | GNGT2 |
HGNC: | 4412 |
UniProt: | D6RDH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 9.11e-07 | 4 |
vertebrate lens cell | 9.11e-07 | 4 |
lens epithelial cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.96e-08 | 11 |
lung small cell carcinoma | 8.61e-07 | 4 |