FFCP PHASE1:Hg19::chr17:38613730..38613745,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:38613730..38613745,+ | |||
|id=chr17:38613730..38613745,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.63e-13!180;CL:0000057!6.33e-12!75 | |||
|ontology_enrichment_celltype_v019=CL:0002564;1.10e-10;3!CL:0000135;3.46e-10;3!CL:0000388;3.46e-10;3!CL:0000327;1.45e-09;15!CL:0000499;2.00e-09;28!CL:0000197;3.00e-09;6!CL:0000098;3.00e-09;6!CL:0002167;3.00e-09;6!CL:0000153;9.93e-09;9!CL:0000447;9.93e-09;9!CL:0002602;1.73e-07;2!CL:0002549;3.17e-07;2!CL:0002575;6.96e-07;2!CL:0002600;6.96e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,8.87e-11,3;CL:0000135,5.56e-10,3;CL:0000388,5.56e-10,3;CL:0000327,1.31e-09,15;CL:0000499,2.16e-09,28;CL:0000197,3.32e-09,6;CL:0000098,3.32e-09,6;CL:0002167,3.32e-09,6;CL:0000153,1.01e-08,9;CL:0000447,1.01e-08,9;CL:0002602,1.56e-07,2;CL:0002600,2.52e-07,2;CL:0002549,3.04e-07,2;CL:0002575,5.83e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;5.62e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,6.05e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005256!2.88e-09!143;UBERON:0002100!1.31e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;3.13e-19;8!UBERON:0000982;3.13e-19;8!UBERON:0004770;3.13e-19;8!UBERON:0011135;1.79e-16;5!UBERON:0002216;1.79e-16;5!UBERON:0011134;1.79e-16;5!UBERON:0002209;1.79e-16;5!UBERON:0002213;1.79e-16;5!UBERON:0007844;1.79e-16;5!UBERON:0011138;1.79e-16;5!UBERON:0001130;1.79e-16;5!UBERON:0001066;1.79e-16;5!UBERON:0001468;1.79e-16;5!UBERON:0000075;1.45e-11;16!UBERON:0002242;1.10e-10;3!UBERON:0007846;3.46e-10;3!UBERON:0000043;3.46e-10;3!UBERON:0007845;3.46e-10;3!UBERON:0001434;3.89e-09;36!UBERON:0004765;1.49e-08;26!UBERON:0006444;1.73e-07;2!UBERON:0001995;1.73e-07;2!UBERON:0004715;1.73e-07;2!UBERON:0005629;3.17e-07;2!UBERON:0005358;3.17e-07;2!UBERON:0001886;3.17e-07;2!UBERON:0004086;3.17e-07;2!UBERON:0005282;3.17e-07;2!UBERON:0005281;3.17e-07;2!UBERON:0002107;4.05e-07;19!UBERON:0006925;4.05e-07;19!UBERON:0005406;6.96e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,2.52e-19,8;UBERON:0000982,2.52e-19,8;UBERON:0004770,2.52e-19,8;UBERON:0011135,1.30e-16,5;UBERON:0002216,1.30e-16,5;UBERON:0011134,1.30e-16,5;UBERON:0002209,1.30e-16,5;UBERON:0002213,1.30e-16,5;UBERON:0005856,1.30e-16,5;UBERON:0005866,1.30e-16,5;UBERON:0005863,1.30e-16,5;UBERON:0007844,1.30e-16,5;UBERON:0011138,1.30e-16,5;UBERON:0001130,1.30e-16,5;UBERON:0001066,1.30e-16,5;UBERON:0001468,1.30e-16,5;UBERON:0000075,1.36e-11,16;UBERON:0002242,8.87e-11,3;UBERON:0003068,8.87e-11,3;UBERON:0002328,8.87e-11,3;UBERON:0004880,8.87e-11,3;UBERON:0007846,5.56e-10,3;UBERON:0000043,5.56e-10,3;UBERON:0007845,5.56e-10,3;UBERON:0011137,1.21e-07,14;UBERON:0006444,1.56e-07,2;UBERON:0001995,1.56e-07,2;UBERON:0004715,1.56e-07,2;UBERON:0005629,3.04e-07,2;UBERON:0005358,3.04e-07,2;UBERON:0001886,3.04e-07,2;UBERON:0004086,3.04e-07,2;UBERON:0005282,3.04e-07,2;UBERON:0005281,3.04e-07,2;UBERON:0005406,3.34e-07,2;UBERON:0002107,3.51e-07,19;UBERON:0006925,3.51e-07,19;UBERON:0008836,3.51e-07,19;UBERON:0003104,9.68e-07,160;UBERON:0009142,9.68e-07,160 | |||
|phase1_expression=0.726713517082227,0,1.12763523276777,0,0,1.74467704820074,0,0,1.56711376919903,0,0,0.218441372130172,0,1.36142988256051,6.95934489028623,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,0,0.12786256184353,3.2529523714611,0.50133791063589,2.02785126545153,0,1.45990461090791,0,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.267899184852239,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0.354668382198357,1.68203280042692,0,0.24666754841716,0,0.134710672069688,0.163461903113459,1.21085942115945,2.88087962239999,0.234321431833797,0,0.570471821544449,0.298897361103602,0,0,0,0.61246251376468,0,0.619954687054593,1.18800285728205,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0.277064115484183,1.31693286264251,0.30648779579902,1.20190447125277,0.113432183160021,0.179389635688862,0.213557388818567,0,0.300091096084402,0.412210116953756,0.257640540045629,1.11670113798954,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0.484938170456436,0,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0,0.310983165046111,0.252320850875628,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0.4115740113314,1.47008711385542,2.53510069643662,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,1.03993478527958,0,0,1.17408694235822,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0.448524337381443,0,0.2933531432838,0.129271715757778,0,0,0,0,0.514414748524284,1.41849132023278,0.799266537048298,1.14382394926518,1.08524321078289,0,0.325736184293735,0,0.791951872933429,0.602878754119172,0,0.99972991182057,0,0,0,0.239624855491583,0,0,1.44781306667579,0.821905290201534,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,2.82190430954022,3.50119364741774,2.71265023699736,3.11956292296211,2.85486382075459,2.05013139544115,6.09135357962109,0.300946099727719,0,0,0,0.553107505625109,0.173767228936166,1.17480694477644,1.71571711905428,0,0,0,0.606255142892519,0,0.30239029332968,0.496215615637554,0.153461973288062,0.561320188866147,1.15325234330131,0,0.482561763430822,1.48418066444991,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0.0920809889358963,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0.211103257785751,0,0.510281115829547,4.53423423814493,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.386682873168488,0.308097234229289,0.614014698904518,0.137836572484531,0.214840489736547,0.725083469571143,0.255679882248303,0.0890320356467374,0,0,0.127612712494584,0,0.929691098594572,0.62962469366128,0,0,0.532306030317022,0,0,0,0.744316738719335,1.89827654831236,0.38126038784765,0.255897791311334,3.85145089230528,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0.808729926293264,0,0,0,0,1.05650146756755,0.272999822815972,0.565621727814851,0,0,0,0.438450885253763,1.73632660280006,1.9676842561399,0.202910376962704,0,0.281695602532241,0,0,0,0.354761064070598,3.16661452946496,1.31717957183961,0,0,0,0,0,0.470719003883896,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0.933118762985422,0.0898683511473268,0,0,0.197286811273867,0,3.33410970433911,0,0,0,0.520855522170466,0,0.724999575434793,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0.789168805698781,0,0,0.758238955541855,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0,0,0,0.0870592065804026,1.22308667769421,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0.391102765469606,0.0801588202515337,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0,0.124252535565433,0,0,0,0.509991088181609,0,0,0,0,0,0,0,0.458320848023367,2.15361907373044,0.199679000498991,0.429226048136571,0.89268582976749,0,4.68389848605125,0,0,0,0,0,0,0,0.272406812223151,0,0.275078873194468,0,0,0,0,0,0.315222829196793,0.0524545881349981,0.105600336519406,0,0.191915197319445,0.714695326373367,0.662091970365432,0,1.08599920350743,0,0,0,0.246277562248017,0,0.113312091520126,0.879313402068495,1.32506888912221,0,0,0.684347351537318,0,0,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.249960815924213,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0.378806010550178,0.251567901752575,3.55924488638614,0.228840068396924,0,0.46631160174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| |||
|short_description=p@chr17:38613730..38613745,+ | |||
}} |
Revision as of 15:10, 20 January 2014
Short description: | p@chr17:38613730..38613745, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38613730..38613745, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 8.87e-11 | 3 |
fibrocyte | 5.56e-10 | 3 |
tendon cell | 5.56e-10 | 3 |
extracellular matrix secreting cell | 1.31e-09 | 15 |
stromal cell | 2.16e-09 | 28 |
receptor cell | 3.32e-09 | 6 |
sensory epithelial cell | 3.32e-09 | 6 |
olfactory epithelial cell | 3.32e-09 | 6 |
GAG secreting cell | 1.01e-08 | 9 |
carbohydrate secreting cell | 1.01e-08 | 9 |
annulus pulposus cell | 1.56e-07 | 2 |
smooth muscle cell of trachea | 2.52e-07 | 2 |
fibroblast of choroid plexus | 3.04e-07 | 2 |
central nervous system pericyte | 5.83e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 6.05e-08 | 2 |