FFCP PHASE1:Hg19::chr17:1029866..1029912,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:1029866..1029912,- | |||
|id=chr17:1029866..1029912,- | |||
|ontology_enrichment_celltype=CL:1000449!1.93e-13!16;CL:1000507!1.65e-12!12;CL:1000494!1.65e-12!12;CL:1000497!1.22e-11!18;CL:0002518!1.22e-11!18;CL:0000499!1.39e-09!27;CL:0000667!1.70e-09!6;CL:0000058!1.70e-09!6;CL:0000138!1.70e-09!6;CL:0002681!5.56e-09!13;CL:0002584!5.56e-09!13;CL:0000153!1.83e-08!9;CL:0000447!1.83e-08!9;CL:0000327!3.24e-08!14;CL:0000239!4.79e-07!3;CL:1000615!4.79e-07!3;CL:0002306!4.79e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000138;7.14e-19;6!CL:0000153;1.71e-12;9!CL:0000447;1.71e-12;9!CL:0002327;1.70e-11;4!CL:1000507;6.33e-11;10!CL:1000494;6.33e-11;10!CL:1000449;4.89e-10;15!CL:1000497;8.78e-09;17!CL:0002518;8.78e-09;17!CL:0000327;2.28e-07;15!CL:0000499;5.65e-07;28!CL:0000239;6.55e-07;3!CL:1000615;6.55e-07;3!CL:0002306;6.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,5.25e-19,6;CL:0000138,5.25e-19,6;CL:0000153,1.40e-12,9;CL:0000447,1.40e-12,9;CL:0002327,1.71e-11,4;CL:1000507,8.11e-11,10;CL:1000494,8.11e-11,10;CL:1000449,5.79e-10,15;CL:1000497,1.02e-08,17;CL:0002518,1.02e-08,17;CL:0000327,2.03e-07,15;CL:0000499,5.70e-07,28;CL:0000239,9.89e-07,3;CL:1000615,9.89e-07,3;CL:0002306,9.89e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.64e-30!57;UBERON:0005068!9.64e-30!57;UBERON:0006241!9.64e-30!57;UBERON:0007135!9.64e-30!57;UBERON:0002616!2.10e-28!59;UBERON:0002619!5.88e-26!22;UBERON:0003075!2.10e-24!86;UBERON:0007284!2.10e-24!86;UBERON:0000955!3.30e-24!69;UBERON:0006238!3.30e-24!69;UBERON:0001893!6.18e-23!34;UBERON:0003080!6.63e-23!42;UBERON:0002346!8.07e-23!90;UBERON:0002020!8.28e-23!34;UBERON:0003528!8.28e-23!34;UBERON:0001950!1.00e-22!20;UBERON:0001869!1.20e-22!32;UBERON:0000073!1.77e-22!94;UBERON:0001016!1.77e-22!94;UBERON:0000956!2.58e-22!25;UBERON:0000203!2.58e-22!25;UBERON:0001017!1.15e-21!82;UBERON:0002780!1.38e-21!41;UBERON:0001890!1.38e-21!41;UBERON:0006240!1.38e-21!41;UBERON:0002791!1.65e-21!33;UBERON:0005743!3.43e-20!86;UBERON:0007023!2.47e-19!115;UBERON:0003056!5.86e-19!61;UBERON:0000033!8.26e-15!123;UBERON:0004121!5.74e-14!169;UBERON:0000153!1.26e-13!129;UBERON:0007811!1.26e-13!129;UBERON:0004211!1.93e-13!16;UBERON:0001285!1.93e-13!16;UBERON:0007684!1.93e-13!16;UBERON:0003220!1.93e-13!16;UBERON:0004208!1.93e-13!16;UBERON:0000924!2.34e-13!173;UBERON:0006601!2.34e-13!173;UBERON:0000200!6.58e-13!6;UBERON:0009773!1.65e-12!12;UBERON:0001231!1.65e-12!12;UBERON:0004810!1.65e-12!12;UBERON:0006555!1.74e-12!17;UBERON:0005103!1.74e-12!17;UBERON:0000083!1.74e-12!17;UBERON:0009201!1.74e-12!17;UBERON:0004819!1.74e-12!17;UBERON:0006553!1.74e-12!17;UBERON:0003074!1.74e-12!17;UBERON:0003060!1.74e-12!17;UBERON:0004876!3.71e-12!20;UBERON:0000080!1.22e-11!18;UBERON:0002120!1.22e-11!18;UBERON:0004875!1.22e-11!18;UBERON:0005721!1.22e-11!18;UBERON:0005754!1.22e-11!18;UBERON:0007297!1.22e-11!18;UBERON:0000119!3.68e-11!312;UBERON:0004733!2.17e-10!12;UBERON:0002028!2.17e-10!12;UBERON:0007277!2.17e-10!12;UBERON:0000483!2.48e-10!309;UBERON:0002298!5.09e-10!8;UBERON:0003887!1.35e-09!21;UBERON:0000064!1.52e-09!219;UBERON:0004732!1.85e-09!13;UBERON:0001225!5.56e-09!13;UBERON:0008987!5.56e-09!13;UBERON:0000058!7.80e-09!26;UBERON:0003064!1.98e-08!37;UBERON:0000025!2.66e-08!194;UBERON:0002113!2.87e-08!27;UBERON:0003918!2.87e-08!27;UBERON:0005095!2.87e-08!27;UBERON:0007687!2.87e-08!27;UBERON:0003076!5.67e-08!15;UBERON:0003057!5.67e-08!15;UBERON:0000477!1.25e-07!286;UBERON:0002771!2.06e-07!3;UBERON:0001872!2.43e-07!5;UBERON:0002021!2.64e-07!5;UBERON:0004111!4.44e-07!241;UBERON:0006853!4.79e-07!3;UBERON:0007685!4.79e-07!3;UBERON:0004134!4.79e-07!3;UBERON:0001851!5.33e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.13e-44;22!UBERON:0001950;3.16e-43;20!UBERON:0000956;4.34e-39;25!UBERON:0000203;4.34e-39;25!UBERON:0001869;1.63e-26;32!UBERON:0002791;9.66e-26;32!UBERON:0001893;2.49e-25;34!UBERON:0003528;3.02e-24;34!UBERON:0002020;3.02e-24;34!UBERON:0000200;6.38e-18;6!UBERON:0002780;1.59e-15;41!UBERON:0001890;1.59e-15;41!UBERON:0002021;1.36e-14;5!UBERON:0001872;3.74e-14;5!UBERON:0001870;9.28e-14;3!UBERON:0000073;1.32e-11;53!UBERON:0002616;1.32e-11;53!UBERON:0001911;1.70e-11;4!UBERON:0004211;6.33e-11;10!UBERON:0009773;6.33e-11;10!UBERON:0001231;6.33e-11;10!UBERON:0004810;6.33e-11;10!UBERON:0006555;4.89e-10;15!UBERON:0004819;4.89e-10;15!UBERON:0001285;4.89e-10;15!UBERON:0007684;4.89e-10;15!UBERON:0002702;7.49e-10;2!UBERON:0002771;1.59e-09;2!UBERON:0000955;1.21e-07;68!UBERON:0006853;6.55e-07;3!UBERON:0007685;6.55e-07;3!UBERON:0004134;6.55e-07;3!UBERON:0001017;9.26e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.89e-45,22;UBERON:0001950,1.18e-43,20;UBERON:0000956,1.70e-39,25;UBERON:0000203,1.70e-39,25;UBERON:0002791,2.53e-30,32;UBERON:0001869,2.53e-30,32;UBERON:0003528,2.24e-28,34;UBERON:0002020,2.24e-28,34;UBERON:0001893,2.24e-28,34;UBERON:0002780,5.01e-23,41;UBERON:0001890,5.01e-23,41;UBERON:0003080,5.01e-23,41;UBERON:0006240,5.01e-23,41;UBERON:0000073,7.44e-22,53;UBERON:0002616,7.44e-22,53;UBERON:0001049,1.75e-20,56;UBERON:0005068,1.75e-20,56;UBERON:0006241,1.75e-20,56;UBERON:0007135,1.75e-20,56;UBERON:0000200,1.53e-18,6;UBERON:0000955,5.45e-18,68;UBERON:0006238,5.45e-18,68;UBERON:0001017,1.75e-14,81;UBERON:0003056,2.04e-14,61;UBERON:0001872,2.24e-14,5;UBERON:0002021,2.66e-14,5;UBERON:0001016,3.33e-14,89;UBERON:0001870,5.38e-14,3;UBERON:0010371,1.52e-13,104;UBERON:0003075,9.04e-13,82;UBERON:0007284,9.04e-13,82;UBERON:0002346,5.36e-12,86;UBERON:0001911,1.71e-11,4;UBERON:0005333,1.71e-11,4;UBERON:0008425,1.71e-11,4;UBERON:0005311,1.71e-11,4;UBERON:0004810,8.11e-11,10;UBERON:0002702,5.50e-10,2;UBERON:0004211,5.79e-10,15;UBERON:0009773,5.79e-10,15;UBERON:0001231,5.79e-10,15;UBERON:0001285,5.79e-10,15;UBERON:0007684,5.79e-10,15;UBERON:0004208,5.79e-10,15;UBERON:0002771,6.88e-10,2;UBERON:0007023,2.17e-09,114;UBERON:0006555,2.65e-09,16;UBERON:0004819,2.65e-09,16;UBERON:0004121,4.93e-09,171;UBERON:0000924,4.93e-09,171;UBERON:0006601,4.93e-09,171;UBERON:0010314,1.84e-08,132;UBERON:0000025,1.96e-07,192;UBERON:0006853,9.89e-07,3;UBERON:0007685,9.89e-07,3;UBERON:0004134,9.89e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,1.25381888591235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42158728576849,6.01605492763067,1.73815822752988,3.9764297352555,1.45990461090791,0.0945348171640679,0.221729397462564,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747243402759005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.985985791913,9.59091997096074,15.3353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.579125226670317,1.84928690295345,0.895304816199478,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.693138033939733,3.13739907670742,1.46139224653261,0.211103257785751,0,0,0.863663664408557,1.54227252690289,1.62567862526312,0,1.01950509218015,3.3243040357149,0.895499018888713,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0,0.987884678879706,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59750674853184,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.87754158861589,1.41620002574687,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,2.36750641709634,0,0,0.568679216656392,0,0,0,0,0,0,1.13843818411917,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0,1.64608069485285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,1.45798935979259,0,0,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.70836770862748,2.1282458220105,1.14681839138014,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,1.89403005275089,0,3.55924488638614,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50954735955355,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.706521476061055,1.41696576325585,3.83121261737163,1.02558182120378,0,3.04291910842559,1.29180516505481,0,0,0,0,13.6320286057399,0,0,0,0,0,0,0,0.163771917510097,0,0.87798860003913,1.56215619722769,2.68692835451539,1.45856363445986,0,0,0.496211178389294,0,0.127762427639595,0.535701835878287,0,0,0,0,0,0,0.135939465953663,1.97318320688547,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591660003652827,0.852134047591577,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37897960562944,0,0,0,0,0,0,0,0,0,0,1.76777874496378,0,0,2.97596014533401,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p@chr17:1029866..1029912,- | |||
}} |
Revision as of 12:57, 20 January 2014
Short description: | p@chr17:1029866..1029912, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1029866..1029912, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 5.25e-19 | 6 |
chondrocyte | 5.25e-19 | 6 |
GAG secreting cell | 1.40e-12 | 9 |
carbohydrate secreting cell | 1.40e-12 | 9 |
mammary gland epithelial cell | 1.71e-11 | 4 |
kidney tubule cell | 8.11e-11 | 10 |
nephron tubule epithelial cell | 8.11e-11 | 10 |
epithelial cell of nephron | 5.79e-10 | 15 |
kidney cell | 1.02e-08 | 17 |
kidney epithelial cell | 1.02e-08 | 17 |
extracellular matrix secreting cell | 2.03e-07 | 15 |
stromal cell | 5.70e-07 | 28 |
brush border epithelial cell | 9.89e-07 | 3 |
kidney cortex tubule cell | 9.89e-07 | 3 |
epithelial cell of proximal tubule | 9.89e-07 | 3 |