FFCP PHASE1:Hg19::chr17:1013333..1013374,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:1013333..1013374,- | |||
|id=chr17:1013333..1013374,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.24e-17;3!CL:0000067;1.24e-17;3!CL:0005012;1.24e-17;3!CL:0002304;1.24e-17;3!CL:0002549;9.92e-13;2!CL:0000708;1.46e-08;3!CL:0000342;9.23e-07;1!CL:0002565;9.23e-07;1!CL:0002581;9.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.16e-18,3;CL:0000067,8.16e-18,3;CL:0005012,8.16e-18,3;CL:0002304,8.16e-18,3;CL:0002549,8.86e-13,2;CL:0000708,1.02e-08,3;CL:0002581,7.57e-07,1;CL:0000342,8.98e-07,1;CL:0002565,8.98e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;2.36e-07;1!DOID:3371;4.01e-07;1!DOID:4549;4.01e-07;1!DOID:5861;4.01e-07;1!DOID:6496;4.01e-07;1!DOID:3347;4.01e-07;1!DOID:0050619;9.23e-07;1!DOID:1357;9.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.36e-07,1;DOID:3371,3.57e-07,1;DOID:4549,3.57e-07,1;DOID:5861,3.57e-07,1;DOID:6496,3.57e-07,1;DOID:3347,5.06e-07,1;DOID:0050619,6.02e-07,1;DOID:1357,6.02e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002200!1.88e-07!11;UBERON:0006876!1.88e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;1.55e-24;11!UBERON:0000488;1.13e-22;4!UBERON:0001778;1.24e-17;3!UBERON:0001775;1.24e-17;3!UBERON:0002203;3.49e-15;6!UBERON:0001768;3.49e-15;6!UBERON:0002200;3.49e-15;6!UBERON:0007625;9.91e-13;11!UBERON:0005629;9.92e-13;2!UBERON:0005358;9.92e-13;2!UBERON:0001886;9.92e-13;2!UBERON:0004086;9.92e-13;2!UBERON:0005282;9.92e-13;2!UBERON:0005281;9.92e-13;2!UBERON:0005284;4.36e-11;5!UBERON:0001801;5.96e-10;14!UBERON:0003210;1.46e-08;3!UBERON:0000019;2.91e-07;19!UBERON:0000047;2.91e-07;19!UBERON:0004088;2.91e-07;19!UBERON:0010230;2.91e-07;19!UBERON:0000970;6.93e-07;20!UBERON:0001764;9.23e-07;1!UBERON:0001825;9.23e-07;1!UBERON:0002506;9.23e-07;1!UBERON:0001769;9.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,1.05e-24,11;UBERON:0000488,7.22e-23,4;UBERON:0001778,8.16e-18,3;UBERON:0001775,8.16e-18,3;UBERON:0002203,2.60e-15,6;UBERON:0001768,2.60e-15,6;UBERON:0002200,2.60e-15,6;UBERON:0007625,8.14e-13,11;UBERON:0005629,8.86e-13,2;UBERON:0005358,8.86e-13,2;UBERON:0001886,8.86e-13,2;UBERON:0004086,8.86e-13,2;UBERON:0005282,8.86e-13,2;UBERON:0005281,8.86e-13,2;UBERON:0005284,3.95e-11,5;UBERON:0001801,5.12e-10,14;UBERON:0003210,1.02e-08,3;UBERON:0001764,6.02e-07,1;UBERON:0001825,6.02e-07,1;UBERON:0000019,6.26e-07,20;UBERON:0000047,6.26e-07,20;UBERON:0010312,6.26e-07,20;UBERON:0004088,6.26e-07,20;UBERON:0010230,6.26e-07,20;UBERON:0003072,6.26e-07,20;UBERON:0004128,6.26e-07,20;UBERON:0003071,6.26e-07,20;UBERON:0002506,8.98e-07,1;UBERON:0001769,8.98e-07,1 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0.74259811776028,0,0,0,0,0,0.984968464614303,0.408001382488506,0,0,0.958120975510189,0.502170558379211,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,1.70162670895322,2.88248216701333,2.3715392137144,0.0654895377488563,0.364295288292542,0,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,3.17850598054356,2.88087962239999,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.310983165046111,0.756962552626885,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,0,3.36198174427723,0.117408694235822,0,0,0,0,0,0.246217006087397,0.936017060556951,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03671903643299,0.43596006883328,1.9067954313447,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15662369942424,1.14861935834114,0,0,0.205476322550383,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0.670065061337395,0,0,0,0,0,0,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,9.79005787313703,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0.232420756919918,0,0.200506470303285,0,0,0,0,0.451199612907412,0,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.429374660225974,2.60510858551767,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.747768497892312,9.62479855263359,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0.50787533340481,0,0,0,0,0.307240764308458,0.223676107892416,0.333698283423817,0,0,0,0,0,0,1.30998378285754,0.146508179271894,0.121360521749513,0,1.42068073403207,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0.331737779793674,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0.702793337176017,0,0,0.485560759068186,0,1.20990716048664,0,0.126373159256976,0,0.103688191397247,0,0,0.627865836814451,0,1.13843818411917,0.277349346026277,0.173559738335131,0,0,0,5.67553907156335,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,2.82419605412801,0,0.411125773940253,0,0,0.195551382734803,0.0801588202515337,0.426905989478705,0,3.74635084600676,0,0,0,0.248505071130865,0,1.08723364858891,1.15063130943567,0.101998217636322,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0.201550417460179,0.360299883542404,0,0.236349546921671,0.247247575143499,0.26961417541674,0.590564889088493,0,0,0,0,0,0,0.449947783103001,0,0.121499113316049,0,0,0,0.633602019116439,0,0,0,0,2.5426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0.513260513652988,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,1.72759505875258,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537266523244462,0,0,0,0.38582807654183,0,0.256241518587947,1.72715170865599,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0.629063767423586,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,2.0710797781803,1.19349733269765,0,0,0,0,0,0.295712172434091,0,0,0,0,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0.111231401892069,0,0.157115589916002,0,1.82631744101899,0,0,0,0,1.3948971044175,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0,0,0,0,0.301925687133347,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0.339854229375634,0.0939839179798536,0.257831551894309,0,0,0.352894871715692,0,0,0,0,0.157771562193185,0,0,1.0580536810308,0,0,0,1.00933139868063,1.09265571963696,0.380095503034311,0.101988829741982,0,0,0,0.151557396436479,0.535928260312357,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.112131862580613,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0.106727345877715,0,2.60493086109102,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr17:1013333..1013374,- | |||
}} |
Revision as of 12:57, 20 January 2014
Short description: | p@chr17:1013333..1013374, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:1013333..1013374, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.16e-18 | 3 |
ciliated epithelial cell | 8.16e-18 | 3 |
multi-ciliated epithelial cell | 8.16e-18 | 3 |
non-pigmented ciliary epithelial cell | 8.16e-18 | 3 |
fibroblast of choroid plexus | 8.86e-13 | 2 |
leptomeningeal cell | 1.02e-08 | 3 |
perirenal preadipocyte | 7.57e-07 | 1 |
pigment cell (sensu Vertebrata) | 8.98e-07 | 1 |
iris pigment epithelial cell | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 1.05e-24 | 11 |
atypical epithelium | 7.22e-23 | 4 |
ciliary epithelium | 8.16e-18 | 3 |
ciliary body | 8.16e-18 | 3 |
vasculature of eye | 2.60e-15 | 6 |
uvea | 2.60e-15 | 6 |
vasculature of head | 2.60e-15 | 6 |
pigment epithelium of eye | 8.14e-13 | 11 |
vascular plexus | 8.86e-13 | 2 |
ventricle of nervous system | 8.86e-13 | 2 |
choroid plexus | 8.86e-13 | 2 |
brain ventricle | 8.86e-13 | 2 |
ventricular system of brain | 8.86e-13 | 2 |
ventricular system of central nervous system | 8.86e-13 | 2 |
brain vasculature | 3.95e-11 | 5 |
anterior segment of eyeball | 5.12e-10 | 14 |
blood-cerebrospinal fluid barrier | 1.02e-08 | 3 |
maxillary sinus | 6.02e-07 | 1 |
paranasal sinus | 6.02e-07 | 1 |
camera-type eye | 6.26e-07 | 20 |
simple eye | 6.26e-07 | 20 |
immature eye | 6.26e-07 | 20 |
ocular region | 6.26e-07 | 20 |
eyeball of camera-type eye | 6.26e-07 | 20 |
optic cup | 6.26e-07 | 20 |
optic vesicle | 6.26e-07 | 20 |
eye primordium | 6.26e-07 | 20 |
iris epithelium | 8.98e-07 | 1 |
iris | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.36e-07 | 1 |
chondrosarcoma | 3.57e-07 | 1 |
extraosseous chondrosarcoma | 3.57e-07 | 1 |
myxoid chondrosarcoma | 3.57e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 3.57e-07 | 1 |
osteosarcoma | 5.06e-07 | 1 |
paranasal sinus cancer | 6.02e-07 | 1 |
maxillary sinus cancer | 6.02e-07 | 1 |