FFCP PHASE1:Hg19::chr16:54972581..54972585,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000558156,ENST00000559802_5end | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_1_at_ENST00000558156_5end,CAGE_peak_1_at_ENST00000559802_5end | |||
|id=chr16:54972581..54972585,- | |||
|ontology_enrichment_celltype=CL:0002573!2.32e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002327;5.56e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,5.56e-26,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;9.37e-99;1 | |||
|ontology_enrichment_disease=DOID:3193!2.07e-10!2;DOID:962!2.07e-10!2;DOID:1192!2.32e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.56e-26;4!DOID:1612;5.56e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.56e-26,4;DOID:1612,5.56e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0003127!4.73e-37!2;UBERON:0006122!1.30e-19!1;UBERON:0001301!3.25e-19!1;UBERON:0003126!2.42e-11!7;UBERON:0001005!2.42e-11!7;UBERON:0002950!1.72e-10!2;UBERON:0001891!1.72e-10!2;UBERON:0009616!1.72e-10!2;UBERON:0000915!8.12e-09!52;UBERON:0000310!2.62e-08!10;UBERON:0001443!1.24e-07!11;UBERON:0006947!2.79e-07!3;UBERON:0004054!2.79e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;5.56e-26;4!UBERON:0001044;9.07e-18;6!UBERON:0003293;9.07e-18;6!UBERON:0003294;9.07e-18;6!UBERON:0010047;9.07e-18;6!UBERON:0003408;9.07e-18;6!UBERON:0000167;9.07e-18;6!UBERON:0002365;1.83e-13;31!UBERON:0002330;1.83e-13;31!UBERON:0000310;2.73e-11;10!UBERON:0001443;2.16e-10;11!UBERON:0001041;2.00e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,5.56e-26,4;UBERON:0005333,5.56e-26,4;UBERON:0008425,5.56e-26,4;UBERON:0005311,5.56e-26,4;UBERON:0001044,9.07e-18,6;UBERON:0003293,9.07e-18,6;UBERON:0003294,9.07e-18,6;UBERON:0010047,9.07e-18,6;UBERON:0000167,9.07e-18,6;UBERON:0002365,5.04e-14,31;UBERON:0002330,5.04e-14,31;UBERON:0000076,9.39e-14,8;UBERON:0000310,2.73e-11,10;UBERON:0003408,3.02e-11,10;UBERON:0001443,2.16e-10,11;UBERON:0002530,5.66e-08,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.98521999978316,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286888821570705,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000558156,p1@ENST00000559802 | |||
}} |
Revision as of 03:37, 12 January 2014
Short description: | p1@ENST00000558156, p1@ENST00000559802 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000558156_5end, CAGE_peak_1_at_ENST00000559802_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 0bp_to_ENST00000558156, ENST00000559802_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 5.56e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 5.56e-26 | 4 |
mammary bud | 5.56e-26 | 4 |
mammary ridge | 5.56e-26 | 4 |
mammary placode | 5.56e-26 | 4 |
saliva-secreting gland | 9.07e-18 | 6 |
gland of oral region | 9.07e-18 | 6 |
gland of foregut | 9.07e-18 | 6 |
oral gland | 9.07e-18 | 6 |
oral cavity | 9.07e-18 | 6 |
exocrine gland | 5.04e-14 | 31 |
exocrine system | 5.04e-14 | 31 |
external ectoderm | 9.39e-14 | 8 |
breast | 2.73e-11 | 10 |
gland of gut | 3.02e-11 | 10 |
chest | 2.16e-10 | 11 |
gland | 5.66e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.56e-26 | 4 |
breast cancer | 5.56e-26 | 4 |