FFCP PHASE1:Hg19::chr13:94350762..94350765,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:94350762..94350765,+ | |||
|id=chr13:94350762..94350765,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.11e-09;3!CL:0000064;1.94e-09;3!CL:0000067;1.94e-09;3!CL:0005012;1.94e-09;3!CL:0002304;1.94e-09;3!CL:0000182;8.68e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.21e-09,3;CL:0000067,1.21e-09,3;CL:0005012,1.21e-09,3;CL:0002304,1.21e-09,3;CL:0002605,1.26e-09,3;CL:0000182,8.18e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.08e-10;3!UBERON:0000358;2.89e-08;1!UBERON:0005425;1.07e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;3.31e-08;1!DOID:4549;3.31e-08;1!DOID:5861;3.31e-08;1!DOID:6496;3.31e-08;1!DOID:5409;2.75e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.10e-08,1;DOID:4549,3.10e-08,1;DOID:5861,3.10e-08,1;DOID:6496,3.10e-08,1;DOID:5409,3.78e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.61e-10!94;UBERON:0001016!8.61e-10!94;UBERON:0001017!1.44e-07!82;UBERON:0005743!2.18e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.94e-09;3!UBERON:0001775;1.94e-09;3!UBERON:0000941;1.07e-07;1!UBERON:0001282;1.07e-07;1!UBERON:0007195;1.07e-07;1!UBERON:0001785;1.07e-07;1!UBERON:0002464;1.07e-07;1!UBERON:0004904;1.07e-07;1!UBERON:0009842;1.07e-07;1!UBERON:0003704;1.07e-07;1!UBERON:0001021;1.07e-07;1!UBERON:0001171;1.07e-07;1!UBERON:0001172;1.07e-07;1!UBERON:0002104;1.65e-07;21!UBERON:0002346;1.81e-07;4!UBERON:0000923;1.81e-07;4!UBERON:0010316;1.81e-07;4!UBERON:0005291;1.81e-07;4!UBERON:0000488;2.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.48e-10,86;UBERON:0001778,1.21e-09,3;UBERON:0001775,1.21e-09,3;UBERON:0003056,8.42e-09,61;UBERON:0001282,5.70e-08,1;UBERON:0009842,5.70e-08,1;UBERON:0003704,5.70e-08,1;UBERON:0001171,5.70e-08,1;UBERON:0001172,5.70e-08,1;UBERON:0000019,6.28e-08,20;UBERON:0000047,6.28e-08,20;UBERON:0010312,6.28e-08,20;UBERON:0004088,6.28e-08,20;UBERON:0010230,6.28e-08,20;UBERON:0003072,6.28e-08,20;UBERON:0004128,6.28e-08,20;UBERON:0003071,6.28e-08,20;UBERON:0000941,1.04e-07,1;UBERON:0001785,1.04e-07,1;UBERON:0002464,1.04e-07,1;UBERON:0004904,1.04e-07,1;UBERON:0001021,1.04e-07,1;UBERON:0003902,1.04e-07,1;UBERON:0005425,1.04e-07,1;UBERON:0003075,1.53e-07,82;UBERON:0007284,1.53e-07,82;UBERON:0000970,1.54e-07,21;UBERON:0002104,1.54e-07,21;UBERON:0007195,1.87e-07,1;UBERON:0000488,1.93e-07,4;UBERON:0001456,3.47e-07,22 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,2.0036519099174,1.36874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,1.77383517970051,1.49319135678314,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0.490385709340376,0.151357427644931,0.576175924479999,0,0,0,0,0,0.161872944368132,0.561803226808994,0.408308342509787,0.368502951935304,0.309977343527296,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0.252433774244115,0,0.323292113637624,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0.457847324091717,0.165018999841176,0,0,0,0.096670718292122,0.616194468458578,0.614014698904518,0.275673144969061,0.429680979473094,0.290033387828457,0.340906509664404,0.178064071293475,0,0,0.127612712494584,0,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0,0.762520775695299,0,0.42793898803392,0,0,0.719489830333259,0,0.706874414074119,0,0,0,0,0,0,0.136499911407986,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,2.50634477090067,0.169291777801603,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0.552567831062295,0,0,0,0,0.0898683511473268,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,1.72371686620732,1.16641845353302,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0,0,0,0,0,1.93701494939902,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0.569261198172555,0,0,0,0,0,0.995261931078505,0,1.83309043480088,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,2.41981432097328,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,3.17722056089401,0,0.137041924646751,0.19871461170299,0.126621591911757,0,0,0.85381197895741,0,0,0,1.54435498075768,0.14405479798815,0,0,0.407712618220842,0.627617077873999,0,0.288950589901519,0,0.273810757783986,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0.551482276150566,0.247247575143499,1.21326378937533,0.590564889088493,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0.121499113316049,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0.511164065356265,0,0.293104467356165,0,0.129282956361551,0,0.342173675768659,0,0,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0,0.0620964029413835,1.24513771442608,0.124980407962107,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0.777186002913902,0.147855149989634,0,0.449803112163605,0.465788870628778,0,0,0,0.450772826991655,0.380805212168795,0.406870733204662,0,0.322231671127465,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0.530067437837643,0,0,0.256241518587947,0,0,0,0,0.132864840313363,0,0.327609848846413,0,0,0.19998739585493,0.213383459388282,0,0,0,0,0,0.639471856518258,0.107824811396682,0.629063767423586,0.327628914576042,0,1.48802444071178,2.72658681369805,0,0.318004350653419,0,0.80057074828547,0.352675943690684,0.3062454773532,0,0,0.638535436228605,0,1.76450187355203,0,0.161475645631851,1.42769420259154,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,0.496211178389294,0.351742488719241,0,0,3.02655349996942,0,0,0,0.115233987555779,0.171488009437418,0.339848664884159,0,0,0.111231401892069,0.156986185701028,0.785577949580009,0,5.47895232305697,0.215927591218621,0,0.500335809236594,3.16027223465453,0,0,0,1.03608082081518,0,0,0,0,0.0852134047591577,0,0.9164274741762,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.594600453887843,0.22589216407792,1.20934568419972,1.20770274853339,0,0.874238242015829,0,0.245148321753905,0.235676547101626,0,0.297046400327086,2.5359343655004,0.509781344063451,0.0939839179798536,0.0644578879735772,0,0,0.352894871715692,0,1.46067277649303,0.458729283404541,0.143339583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| |||
|short_description=p@chr13:94350762..94350765,+ | |||
}} |
Revision as of 18:16, 11 January 2014
Short description: | p@chr13:94350762..94350765, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:94350762..94350765, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.21e-09 | 3 |
ciliated epithelial cell | 1.21e-09 | 3 |
multi-ciliated epithelial cell | 1.21e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.21e-09 | 3 |
astrocyte of the cerebral cortex | 1.26e-09 | 3 |
hepatocyte | 8.18e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.48e-10 | 86 |
ciliary epithelium | 1.21e-09 | 3 |
ciliary body | 1.21e-09 | 3 |
pre-chordal neural plate | 8.42e-09 | 61 |
intralobular bile duct | 5.70e-08 | 1 |
acinus | 5.70e-08 | 1 |
intrahepatic bile duct | 5.70e-08 | 1 |
portal lobule | 5.70e-08 | 1 |
hepatic acinus | 5.70e-08 | 1 |
camera-type eye | 6.28e-08 | 20 |
simple eye | 6.28e-08 | 20 |
immature eye | 6.28e-08 | 20 |
ocular region | 6.28e-08 | 20 |
eyeball of camera-type eye | 6.28e-08 | 20 |
optic cup | 6.28e-08 | 20 |
optic vesicle | 6.28e-08 | 20 |
eye primordium | 6.28e-08 | 20 |
cranial nerve II | 1.04e-07 | 1 |
cranial nerve | 1.04e-07 | 1 |
nerve trunk | 1.04e-07 | 1 |
nerve connecting eye with brain | 1.04e-07 | 1 |
nerve | 1.04e-07 | 1 |
retinal neural layer | 1.04e-07 | 1 |
presumptive neural retina | 1.04e-07 | 1 |
neural plate | 1.53e-07 | 82 |
presumptive neural plate | 1.53e-07 | 82 |
eye | 1.54e-07 | 21 |
visual system | 1.54e-07 | 21 |
stroma of bone marrow | 1.87e-07 | 1 |
atypical epithelium | 1.93e-07 | 4 |
face | 3.47e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.10e-08 | 1 |
extraosseous chondrosarcoma | 3.10e-08 | 1 |
myxoid chondrosarcoma | 3.10e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 3.10e-08 | 1 |
lung small cell carcinoma | 3.78e-07 | 4 |